Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1585 ATGGTGATGCTAGAATGTCCAGTTTGCAAGGCTATCATAGAAGAGCAAAAATTGGTTCCTTTATATGGTAGGGGTAAGACATCAACTGACCCAAGATCAAAAAGTATTCCTGGAATTAATATTCCTAATCGTCCTGCGGGACAGAGACCTGAAGCAGCAGGTCCTCCCCCAGAACCAAATCCTTTTCCTCACAATGGTTTTGGATTCATGGGAGGTCTTGGAGGGTTTGCCCCAATGGCATCAACAAGGTTTGGCAATTTCACGTTGTCTGCGGCTTTTGGTGGTCTTGTCCCATCTTTATTCAACTTTCAGATGCATGGATATGCAGATCCAAGCATGTATGGTGCAGGTGCTAACTTTCCATATGGGTTTCCTAACATGTTTCATGGTAGCCATGGTCACGGCCATGGATACTATCACCAGCTCCGTCAAGGTCAGCAAGATTATTATCTGAAGCGGCTGCTTCTGTTTATTGGTTTTTGTGTTCTTCTTGCCCTAATCTGGCAATAG 510 44.51 MVMLECPVCKAIIEEQKLVPLYGRGKTSTDPRSKSIPGINIPNRPAGQRPEAAGPPPEPNPFPHNGFGFMGGLGGFAPMASTRFGNFTLSAAFGGLVPSLFNFQMHGYADPSMYGAGANFPYGFPNMFHGSHGHGHGYYHQLRQGQQDYYLKRLLLFIGFCVLLALIWQ 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27386484 27387112 + CePI673135_08g015850.1 Cec08g1585 210227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1585 169 MobiDBLite consensus disorder prediction 23 61 - -
Cec08g1585 169 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 5 160 IPR045103 GO:0005783(InterPro)|GO:0006511(PANTHER)|GO:0006511(InterPro)|GO:0044390(PANTHER)|GO:0061630(InterPro)|GO:0061630(PANTHER)|GO:0071712(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g1309 Cec-Chr4:32698725 Cec08g1585 Cec-Chr8:27386484 1.80E-47 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1585 K10666 - csv:101221027 268.47