Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1594 ATGTTTTCCTCCACAACCCACCATAGCCATTGGAATAATTTCATCATGGACTACACCACCACCACCACCACCACCGCCCCACCGCCGCCGCCATTGCCAGACCTTTCCTTACACATAAGTCCACCGTCGGATTCCGGCAATCATTATTTGAAAAACCAGCAACCTCAAATCTATGGACGCCATTTGAAGAGAGGGGCAAAAATGGGATTTGGGATTAAAAGAAGCATTAGAGCTCCAAGAATGAGATGGACTACTACTCTTCATGCCCATTTTGTCCATGCCGTTCAGCTCCTTGGCGGCCATGAAAGGGCAACACCAAAATCAGTATTGGAGCTGATGAATGTGAAGGATCTAACCCTAGCTCATGTAAAGAGCCATTTACAGATGTATAGAACAGTGAAAAGCACTGACAAAGCAACTGACTCAGCCATGAAGAACCAAAGGCAAGAAATTGAAGCAAGTGGTGTTTCGAATTGTGAGAATTCTAAACCACCACTTACAATGTGGAAAAGCCCCAATCAACAAATGAAATTGTTCTGTTCATCAATGGAGACAAATCAAGAGATGACGAGCAGATGGAGTCAACTTTGCAACAATAGTATTGGAAACAACCAGCAGCAGGAGAAGGACCGACACAATGGAAATGCAAATATGAAAATCTCGAGTGGTGTGAAGAAGCAGAATAATAATAATAATAATAATAATAATAATAATAATATTAACTTAGACTTCACTTTGGGATGCCCTAATTCTCTAACAATCCATTCTAATCCTCACTCTTCATCTACTGAACTCCCTCTTCTCAAATGCTAA 813 41.45 MFSSTTHHSHWNNFIMDYTTTTTTTAPPPPPLPDLSLHISPPSDSGNHYLKNQQPQIYGRHLKRGAKMGFGIKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKATDSAMKNQRQEIEASGVSNCENSKPPLTMWKSPNQQMKLFCSSMETNQEMTSRWSQLCNNSIGNNQQQEKDRHNGNANMKISSGVKKQNNNNNNNNNNNNINLDFTLGCPNSLTIHSNPHSSSTELPLLKC 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27456395 27459374 - CePI673135_08g015940.1 Cec08g1594 210236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1594 270 MobiDBLite consensus disorder prediction 150 170 - -
Cec08g1594 270 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 132 IPR006447 GO:0003677(InterPro)
Cec08g1594 270 SUPERFAMILY Homeodomain-like 76 133 IPR009057 -
Cec08g1594 270 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 48 250 IPR044847 GO:0000976(PANTHER)|GO:0000976(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006355(PANTHER)|GO:0010158(InterPro)
Cec08g1594 270 Gene3D - 78 135 - -
Cec08g1594 270 FunFam Myb family transcription factor 77 135 - -
Cec08g1594 270 Pfam Myb-like DNA-binding domain 80 131 IPR001005 -
Cec08g1594 270 MobiDBLite consensus disorder prediction 200 238 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1594 Cec-Chr8:27456395 Cec09g1158 Cec-Chr9:11511445 2.30E-32 dispersed
Cec05g2157 Cec-Chr5:33201864 Cec08g1594 Cec-Chr8:27456395 1.50E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30112 PF00249 Myb_DNA-binding 1.00E-05 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1594 - - - 0.0