Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1606 ATGCCTTTCTTTCACAAAAGCGCTTCAAATTCTCGGCTTCAACAGAAGGTACCCAATTCTGAATTTTCCGTTGGACTACCGGAACCGCTCGTTCAACGGCGGCTCACCAGACAGAGGAAGCTCCGGCATCTTACGGATAGGGACGTTGGCTTTGAACACCCCCGATCATCTCCCGATTGCCCCGAACTTTCGGCAAAACCTAGATCGCCTCTAGGGGGTTCCGAACGTTGGTCCTCGTCGGCTTTGCCCCTGCCTTTGCCTCTTCCGGAGTTCTTTCCGGTTCAGAACCCGGAGTCCGGTTCTTGGAATTCTGGCCAAGGGCGTGTTGGATCGCCTATTGAAACTCCGGTCCGAAATTCCGCTATTAAAACTGTTAGGAAGAACTCTGATCGCGCAACAACGAATGTAAGTAAAAGTTTGGGCCACAATCAAAGGCGAGTTGCTATAGATTTGACCTTGGAAGTTAATAATGGCAATTCAGGAGGGGCCGGGGCTACCACATTTACAAGCCCTCAAAGCCTCTCTGTGAATCCGGAGAAATCGAATCCGAATAAGGAGTTTCTTTTTGGTTGTTCAGATCAGCTTCCAAACAACAAAGGCAGGGGTTCCCCTACTTATCCGAGTATTGAAAGGGGTAACTACGATTTGACACCTAAGAATTCGTCGTCAAAGAGTGCGCCAACGAGCATTTTACCGAGTCCTGCTGTTAGCCCACGAAGAACACACACTGGAAATTTTTTTGTTTCTGGTTTGACTCACCATGAATATCAGGGATCTCCTTCTAATAATTCTCCTAAAGTACCACCCCTTAAAACTGCACATAGTTCTCAACCTTCCCCTCTCCATAGCCCGACAGCTCGAGGTTCCATAAGCAATCCCAGATCTCCTAATGATGTGACATTTCTCCCACATCCCAAGTTACAAAAAGATAGTAGTATAGATCGGTCTGAAAGCCATGGTCATGTCAATGCCCATCCATTGCCCCTTCCTCCTCCATTAGTAGCCTCTTCACAAGCATCTCCACAATCTCTTCCGTCAAATGTTCATCACGTTTTTGAGAAGCCATACATTTCATCTATGAAAGGTCAGTGGCAAAAAGGAAAGCGAATTGGGCGTGGTACGTTCGGAAGTGTTTATCTAGCAACCAACAGAGAGACTGGAGCTTTATGTGCAATGAAAGAAGTTGACCTCATTCCTGATGATCCTAAATCTGCTGAATGTATAAAGCAACTAGAGCAGGAAATTAAAGTCCTCAGTCAGCTTAAACATCCAAATATTGTACAATATTATGGAAGTGAAATAATTGGTGATCATTTCTATATATATTTGGAGTATGTTCATCCTGGTTCAATAAATAAATATGTTCGTGAACATTGTGGAGCCATTACAGAATCTATTGTTCGCAATTTCACCCGCCATATTCTCTCTGGACTGGCTTACTTGCATAGCACAAAAACAATTCACAGAGATATCAAAGGTGCAAACTTGCTAGTTGATTCATCAGGCGTTGTCAAACTTGCAGATTTTGGGATGGCAAAACATCTGACAGGGCAGTATGATCTTTCTTTGAAGGGTAGTCCGAACTGGATGGCTCCGGAGGTCATAAAGGCTGCTATGTTGAAAGATGCCAACCCTGATCTTGCTTTGGCAGTTGACATTTGGAGTCTGGGTTGCACCATAATTGAAATGCTGAATGGAAAACCTCCATGGTCTGAGTTTGAAGGGCATCAAGCTATGTTCAAGGTGTTGAATAAAACCCCGCCTACCCCAGAAAAGCTATCTCCTGAAGGGAAAGACTTCCTCCAGTGTTGCTTTCAGAGGAATCCAGCTGACAGACCAACAGCCTCGGTGCTCCTTGACCATCCTTTCTTAAGATCCTCAAATGACTCAAATGTTTCAATCCCCACGTCATCATTTTCAACAATGAACCTCTTGGAAAAATTGTTGAGTCCAAAGGACCCGCTTGATCCCAAAGGAGATCAGGCACAAAACTCTCCGGGAACTTCGGCTTCAAATGATTATTTGCTGTGCCGTAGTCCTTCAACGAACATTGCAAGCAATGTTCCTGCCAATGCTGTTACCAATCATCACTTTTCTATTTCAAGGACTCATAAAAGGGAAGTGCTGCACCTCTGA 2136 44.76 MPFFHKSASNSRLQQKVPNSEFSVGLPEPLVQRRLTRQRKLRHLTDRDVGFEHPRSSPDCPELSAKPRSPLGGSERWSSSALPLPLPLPEFFPVQNPESGSWNSGQGRVGSPIETPVRNSAIKTVRKNSDRATTNVSKSLGHNQRRVAIDLTLEVNNGNSGGAGATTFTSPQSLSVNPEKSNPNKEFLFGCSDQLPNNKGRGSPTYPSIERGNYDLTPKNSSSKSAPTSILPSPAVSPRRTHTGNFFVSGLTHHEYQGSPSNNSPKVPPLKTAHSSQPSPLHSPTARGSISNPRSPNDVTFLPHPKLQKDSSIDRSESHGHVNAHPLPLPPPLVASSQASPQSLPSNVHHVFEKPYISSMKGQWQKGKRIGRGTFGSVYLATNRETGALCAMKEVDLIPDDPKSAECIKQLEQEIKVLSQLKHPNIVQYYGSEIIGDHFYIYLEYVHPGSINKYVREHCGAITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQYDLSLKGSPNWMAPEVIKAAMLKDANPDLALAVDIWSLGCTIIEMLNGKPPWSEFEGHQAMFKVLNKTPPTPEKLSPEGKDFLQCCFQRNPADRPTASVLLDHPFLRSSNDSNVSIPTSSFSTMNLLEKLLSPKDPLDPKGDQAQNSPGTSASNDYLLCRSPSTNIASNVPANAVTNHHFSISRTHKREVLHL 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27519636 27524032 + CePI673135_08g016060.1 Cec08g1606 210248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1606 711 MobiDBLite consensus disorder prediction 162 182 - -
Cec08g1606 711 ProSitePatterns Protein kinases ATP-binding region signature. 370 393 IPR017441 GO:0005524(InterPro)
Cec08g1606 711 MobiDBLite consensus disorder prediction 1 79 - -
Cec08g1606 711 MobiDBLite consensus disorder prediction 41 55 - -
Cec08g1606 711 SUPERFAMILY Protein kinase-like (PK-like) 341 656 IPR011009 -
Cec08g1606 711 MobiDBLite consensus disorder prediction 162 346 - -
Cec08g1606 711 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 21 629 IPR050538 -
Cec08g1606 711 SMART serkin_6 364 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1606 711 MobiDBLite consensus disorder prediction 661 675 - -
Cec08g1606 711 Gene3D Transferase(Phosphotransferase) domain 1 361 652 - -
Cec08g1606 711 MobiDBLite consensus disorder prediction 650 675 - -
Cec08g1606 711 FunFam Mitogen-activated protein kinase kinase kinase 5 361 661 - -
Cec08g1606 711 Pfam Protein kinase domain 365 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1606 711 MobiDBLite consensus disorder prediction 7 21 - -
Cec08g1606 711 MobiDBLite consensus disorder prediction 214 298 - -
Cec08g1606 711 ProSiteProfiles Protein kinase domain profile. 364 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0983 Cec-Chr5:8598472 Cec08g1606 Cec-Chr8:27519636 1.60E-88 dispersed
Cec06g0597 Cec-Chr6:6653700 Cec08g1606 Cec-Chr8:27519636 1.40E-59 dispersed
Cec08g1606 Cec-Chr8:27519636 Cec10g1194 Cec-Chr10:26011144 6.50E-50 dispersed
Cec04g1353 Cec-Chr4:33166806 Cec08g1606 Cec-Chr8:27519636 1.00E-140 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72217 PF00069 Pkinase 9.90E-70 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1606 - - - 0.0