Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1653 ATGAATTTCAAGGATTTTGGGAATGACCCATCTGCCGGAAACGGCGGAGGAGGCGGAAGACCTCCGGCGAACTATCCATTAGCGCGACAATCATCGATCTACTCGCTGACCTTCGATGAGTTTCAGAGCATGGGGAGTATAGGCAAGGATTTTGGGTCGATGAACATGGATGAGCTGTTGAAGAACATTTGGAGCGCTGAAGAAATGCAAACGATGGCATCTTCTGCTACTGCTGTTGATAAAGAAGGGGCTGGTAGTGTTGGTCGTAGTGGTGGGTATTTGCAGAGACAGGGCTCCTTGACGCTGCCTCGGACACTCAGCCAGAAGAAGGTGGATGAGGTATGGAAGGACATAATCAATGAACATGCTAGTGCTAAAGATGGGGCTACTGTTGCTTCTAATTTGCAACAGAGGCAGCAAACTCTTGGGGAGATGACACTCGAAGAGTTTTTATTCAGAGCTGGAGTGGTGAGAGAGGATACTCAGGTGACTGCAAAGCCCAACAATGGAGGGTTCTTTGGCAATAACACTGGTTTTGGAATTGGTTTTCAGCGGCAGGCTAAAGTTCCTGAGAATAATAATCATATTCCGATTCAATCGTCGAACTTATCGCTGAATGTCAATGGAGTCAGAACACATCAGCCGCAGCCAATTTTTCCAAAGCAGCCTGCTGTGACATATGGATCTCAGTTGGCTTTACCCAGTGATGGTCAGCTGGCTAGTACAGGAATTAGAGGGGGAATTATGGGGATTGGAGATCAAGGGTTGAATACAAATTTGATGCAAGGCTCTGCACTGCAGGGTGGAAGAATGGGAGTGGTTAATATAGCAGCTGCTCCGTTACCTATTGCAACAGAATCGCCAAGGGACCAACTATCATCTGATGGGATTGGTAAAAGCAATGGTGATACCTCGTCTGTGTCTCCTGTGCCTTATGCGCTTAATGGTGGAATCAGGGGGAGGAGAAGTAACGGAATTGTCGACAAGGTTGTCGAGAGGAGGCAACGGAGAATGATTAAAAACAGAGAGTCTGCTGCACGATCGCGGGCTCGAAAGCAGGCCTACACAATGGAATTGGAAGCAGAAGTTGCAAAGCTAAAAGAGGAGAACCAAGAACTCCGGCAAAAACAGGCAGAAATCATGGAAATGCAGAAGAACCGGGCATTGGAAGTAATGGATAAGCAACAAGGAATAAAGAAGCGATGCTTAAGACGAACGCAGACTGGCCCATGGTGCCGTGTAGCATATGTCTCAAGGTGTCTTGCTTGCAGAGTATCGTATAACGTATTTGCTTCAAAGTGGATCATCAAGAGTTCAGTAGCTTTTGAGTGGAAGCAAAACACATAG 1347 46.92 MNFKDFGNDPSAGNGGGGGRPPANYPLARQSSIYSLTFDEFQSMGSIGKDFGSMNMDELLKNIWSAEEMQTMASSATAVDKEGAGSVGRSGGYLQRQGSLTLPRTLSQKKVDEVWKDIINEHASAKDGATVASNLQQRQQTLGEMTLEEFLFRAGVVREDTQVTAKPNNGGFFGNNTGFGIGFQRQAKVPENNNHIPIQSSNLSLNVNGVRTHQPQPIFPKQPAVTYGSQLALPSDGQLASTGIRGGIMGIGDQGLNTNLMQGSALQGGRMGVVNIAAAPLPIATESPRDQLSSDGIGKSNGDTSSVSPVPYALNGGIRGRRSNGIVDKVVERRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEENQELRQKQAEIMEMQKNRALEVMDKQQGIKKRCLRRTQTGPWCRVAYVSRCLACRVSYNVFASKWIIKSSVAFEWKQNT 448
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27871465 27874259 + CePI673135_08g016530.1 Cec08g1653 210295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1653 448 SUPERFAMILY Leucine zipper domain 333 381 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1653 448 MobiDBLite consensus disorder prediction 1 26 - -
Cec08g1653 448 Pfam bZIP transcription factor 333 385 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1653 448 CDD bZIP_plant_BZIP46 333 385 - -
Cec08g1653 448 Gene3D - 331 388 - -
Cec08g1653 448 MobiDBLite consensus disorder prediction 286 315 - -
Cec08g1653 448 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 29 410 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Cec08g1653 448 SMART brlzneu 329 393 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1653 448 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 331 388 - -
Cec08g1653 448 Coils Coil 349 386 - -
Cec08g1653 448 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 336 351 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1653 448 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 331 382 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec08g1653 448 MobiDBLite consensus disorder prediction 287 311 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2328 Cec-Chr2:40604270 Cec08g1653 Cec-Chr8:27871465 7.60E-29 dispersed
Cec08g1653 Cec-Chr8:27871465 Cec10g1921 Cec-Chr10:33981053 3.10E-42 dispersed
Cec08g0887 Cec-Chr8:20683977 Cec08g1653 Cec-Chr8:27871465 1.20E-32 transposed
Cec10g0053 Cec-Chr10:581854 Cec08g1653 Cec-Chr8:27871465 1.90E-10 transposed
Cec11g1598 Cec-Chr11:30289905 Cec08g1653 Cec-Chr8:27871465 4.20E-10 transposed
Cec02g0636 Cec-Chr2:6431463 Cec08g1653 Cec-Chr8:27871465 9.90E-92 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30118 PF00170 bZIP_1 4.30E-13 CL0018 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1653 K14432 - csv:101223043 709.909