Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1661 ATGTCCAAGAACCGCGGCGGACTCCTCCCAAATTCCCTCGCGGCCATTAATTTTCTCCAAGACATTGGGAATTATTGCGGGGAAGAAGTAGCCATGGCTGATCAGGTTCAACATCCCACCATCTACCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGTTTCCGTTCTTGTGATGATGGCTTTAGGAACCCTGCACTTTATCAGAGGCGTGCATCAAGCAGCAATCATACAAATGCTGCTTTTCAGTATCCTGCTGTGCAATCCTGTGTTGCTACTACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCTGCGGAGAAAGGAAACTTTATGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCGATTGAGCGTGTCAAGCTCTTGATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGCACAATCCAAGAAGAAGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTCGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCCGGTGGTGCTGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGATTAGCAAACGACGCCAAAGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTATTGCCGGTCTCTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTTTACCGTGGTTTATACTTTGGAATGTATGATTCTCTAAAGCCTGTTTTATTGACTGGGAAGATGCAGGATAGCTTCTTTGCTAGCTTTGCCTTGGGTTGGCTCATCACCAATGGTGCCGGTCTTGCATCTTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAGATTTTGAAGAACGAAGGTGCCAAGTCTCTCTTTAAGGGTGCTGGTGCGAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTATGATAAGTTGCAGATGTTGATGAAAATGTCTCCAGAGTTTTGGACTTTGTTCCGGCGATTTTTTTGCTTCAATAATTTAGTTTTGAAGGGACCGCGGCAGACTCCTCCCAAATTCTCTCGCGGCCATCAGTTTCTCCCAAGGGAAGAAGTAGCCATGGCTGATCAGGTTCAACATCCCACCATCTACCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCAAGGGTTGCTTCGGGTTTCCGTTCTTATGATGATGGCTTTAGGAACCCTGCACTTTATCAGAGGCGTGCATCAATCAGCAATCGTACAAATGCTGCTTTTCAGTATCCTGCTGTGCAATCCTGTGTTGCTACTACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCTGCGGAGAAAGGAAACTTTATGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCGATTGAGCGTGTCAAGCTCTTGATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTATCTGAGCCATACAAGGGTATTGGCGATTGTTTCAAGCGCACAATCCAAGAAGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTCGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCCGGTGGTGCTGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGATTAGCAAACGACGCCAAAGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGATTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTATTGCTGGTCTTTATCGTGGATTTAACATCTCTTGTGTTGGTATCATCGTGTACCGTGGTTTATACTTTGGAATGTATGATTCTCTCAAGCCTGTTTTGTTGACCGGGAAGATGCAGGATAGCTTCTTCGCTAGTTTTGCCTTGGGTTGGCTCATCACCAATGGTGCTGGTCTCGCGTCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTACGATAAGTTGCAGGTGATCGTCTTTGGGAAGAAATATGGATCTGGTGGTGCCTAA 2538 46.73 MSKNRGGLLPNSLAAINFLQDIGNYCGEEVAMADQVQHPTIYQKVAGQLSLQSRVASGFRSCDDGFRNPALYQRRASSSNHTNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQMLMKMSPEFWTLFRRFFCFNNLVLKGPRQTPPKFSRGHQFLPREEVAMADQVQHPTIYQKVAGQLSLQSRVASGFRSYDDGFRNPALYQRRASISNRTNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA 845
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 27935947 27945032 + CePI673135_08g016610.1 Cec08g1661 210303
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1661 845 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 212 IPR018108 -
Cec08g1661 845 ProSiteProfiles Solute carrier (Solcar) repeat profile. 324 410 IPR018108 -
Cec08g1661 845 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 316 IPR018108 -
Cec08g1661 845 Gene3D Mitochondrial carrier domain 546 841 IPR023395 -
Cec08g1661 845 Gene3D Mitochondrial carrier domain 122 414 IPR023395 -
Cec08g1661 845 SUPERFAMILY Mitochondrial carrier 119 406 IPR023395 -
Cec08g1661 845 ProSiteProfiles Solute carrier (Solcar) repeat profile. 748 834 IPR018108 -
Cec08g1661 845 FunFam ADP,ATP carrier protein, mitochondrial 546 841 - -
Cec08g1661 845 Pfam Mitochondrial carrier protein 748 836 IPR018108 -
Cec08g1661 845 Pfam Mitochondrial carrier protein 543 640 IPR018108 -
Cec08g1661 845 Pfam Mitochondrial carrier protein 324 412 IPR018108 -
Cec08g1661 845 Pfam Mitochondrial carrier protein 648 742 IPR018108 -
Cec08g1661 845 Pfam Mitochondrial carrier protein 119 216 IPR018108 -
Cec08g1661 845 Pfam Mitochondrial carrier protein 224 318 IPR018108 -
Cec08g1661 845 PRINTS Adenine nucleotide translocator signature 329 345 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cec08g1661 845 PRINTS Adenine nucleotide translocator signature 121 133 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cec08g1661 845 PRINTS Adenine nucleotide translocator signature 198 210 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cec08g1661 845 PRINTS Adenine nucleotide translocator signature 165 186 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cec08g1661 845 PRINTS Adenine nucleotide translocator signature 224 237 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cec08g1661 845 ProSiteProfiles Solute carrier (Solcar) repeat profile. 648 740 IPR018108 -
Cec08g1661 845 ProSiteProfiles Solute carrier (Solcar) repeat profile. 543 636 IPR018108 -
Cec08g1661 845 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 541 842 IPR002113 GO:0005471(InterPro)|GO:0005471(PANTHER)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Cec08g1661 845 FunFam ADP,ATP carrier protein, mitochondrial 122 415 - -
Cec08g1661 845 SUPERFAMILY Mitochondrial carrier 543 830 IPR023395 -
Cec08g1661 845 PRINTS Mitochondrial carrier protein signature 289 307 IPR002067 GO:0055085(InterPro)
Cec08g1661 845 PRINTS Mitochondrial carrier protein signature 333 355 IPR002067 GO:0055085(InterPro)
Cec08g1661 845 PRINTS Mitochondrial carrier protein signature 187 207 IPR002067 GO:0055085(InterPro)
Cec08g1661 845 PRINTS Mitochondrial carrier protein signature 239 257 IPR002067 GO:0055085(InterPro)
Cec08g1661 845 PRINTS Mitochondrial carrier protein signature 137 151 IPR002067 GO:0055085(InterPro)
Cec08g1661 845 PRINTS Mitochondrial carrier protein signature 124 137 IPR002067 GO:0055085(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1702 Cec-Chr1:31655711 Cec08g1661 Cec-Chr8:27935947 4.60E-109 dispersed
Cec07g0287 Cec-Chr7:2828441 Cec08g1661 Cec-Chr8:27935947 1.10E-162 dispersed
Cec08g1661 Cec-Chr8:27935947 Cec08g1770 Cec-Chr8:28800226 6.10E-31 dispersed
Cec08g1661 Cec-Chr8:27935947 Cec08g1766 Cec-Chr8:28770578 2.30E-54 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1661 K05863 - csv:101203733 734.947