Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec08g1661 | ATGTCCAAGAACCGCGGCGGACTCCTCCCAAATTCCCTCGCGGCCATTAATTTTCTCCAAGACATTGGGAATTATTGCGGGGAAGAAGTAGCCATGGCTGATCAGGTTCAACATCCCACCATCTACCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCGAGGGTTGCTTCGGGTTTCCGTTCTTGTGATGATGGCTTTAGGAACCCTGCACTTTATCAGAGGCGTGCATCAAGCAGCAATCATACAAATGCTGCTTTTCAGTATCCTGCTGTGCAATCCTGTGTTGCTACTACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCTGCGGAGAAAGGAAACTTTATGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCGATTGAGCGTGTCAAGCTCTTGATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTGTCTGAGCCATACAAGGGTATTGGTGATTGTTTCAAGCGCACAATCCAAGAAGAAGGTTTCGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTCGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCCGGTGGTGCTGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGATTAGCAAACGACGCCAAAGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGACTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTATTGCCGGTCTCTACCGTGGATTTAACATTTCTTGTGTTGGTATCATCGTTTACCGTGGTTTATACTTTGGAATGTATGATTCTCTAAAGCCTGTTTTATTGACTGGGAAGATGCAGGATAGCTTCTTTGCTAGCTTTGCCTTGGGTTGGCTCATCACCAATGGTGCCGGTCTTGCATCTTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAGATTTTGAAGAACGAAGGTGCCAAGTCTCTCTTTAAGGGTGCTGGTGCGAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTATGATAAGTTGCAGATGTTGATGAAAATGTCTCCAGAGTTTTGGACTTTGTTCCGGCGATTTTTTTGCTTCAATAATTTAGTTTTGAAGGGACCGCGGCAGACTCCTCCCAAATTCTCTCGCGGCCATCAGTTTCTCCCAAGGGAAGAAGTAGCCATGGCTGATCAGGTTCAACATCCCACCATCTACCAGAAGGTTGCTGGTCAGCTCTCCCTTCAGTCAAGGGTTGCTTCGGGTTTCCGTTCTTATGATGATGGCTTTAGGAACCCTGCACTTTATCAGAGGCGTGCATCAATCAGCAATCGTACAAATGCTGCTTTTCAGTATCCTGCTGTGCAATCCTGTGTTGCTACTACTGATCTTTCTAGGGTTGCCTCAACTGCCTCCCCCATTTTTGTTGCTGCCCCTGCGGAGAAAGGAAACTTTATGATTGACTTTCTTATGGGTGGTGTGTCTGCTGCTGTGTCCAAGACAGCTGCTGCCCCGATTGAGCGTGTCAAGCTCTTGATTCAAAATCAGGATGAGATGATTAAATCTGGACGTTTATCTGAGCCATACAAGGGTATTGGCGATTGTTTCAAGCGCACAATCCAAGAAGAGGGTTTTGGTTCATTGTGGAGAGGAAACACTGCCAATGTCATCCGTTATTTCCCCACTCAAGCATTGAACTTCGCTTTCAAGGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAGGGATGGTTACTGGAAATGGTTTGCTGGTAACCTGGCATCCGGTGGTGCTGCTGGTGCTTCATCCCTTCTTTTTGTTTACTCTCTTGACTATGCCCGTACCCGATTAGCAAACGACGCCAAAGCTGCCAAGAAAGGTGGAGAAAGGCAATTCAATGGATTGGTTGATGTCTACAGGAAGACATTGCAGTCTGATGGTATTGCTGGTCTTTATCGTGGATTTAACATCTCTTGTGTTGGTATCATCGTGTACCGTGGTTTATACTTTGGAATGTATGATTCTCTCAAGCCTGTTTTGTTGACCGGGAAGATGCAGGATAGCTTCTTCGCTAGTTTTGCCTTGGGTTGGCTCATCACCAATGGTGCTGGTCTCGCGTCCTACCCAATTGACACTGTTCGTAGAAGAATGATGATGACATCAGGTGAAGCAGTGAAGTACAAGAGCTCATTGGATGCCTTCTCTCAGATCTTGAAGAACGAAGGTGCCAAGTCTCTCTTCAAGGGTGCTGGTGCTAACATTCTCCGTGCCGTTGCTGGTGCTGGTGTGCTTGCCGGTTACGATAAGTTGCAGGTGATCGTCTTTGGGAAGAAATATGGATCTGGTGGTGCCTAA | 2538 | 46.73 | MSKNRGGLLPNSLAAINFLQDIGNYCGEEVAMADQVQHPTIYQKVAGQLSLQSRVASGFRSCDDGFRNPALYQRRASSSNHTNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQMLMKMSPEFWTLFRRFFCFNNLVLKGPRQTPPKFSRGHQFLPREEVAMADQVQHPTIYQKVAGQLSLQSRVASGFRSYDDGFRNPALYQRRASISNRTNAAFQYPAVQSCVATTDLSRVASTASPIFVAAPAEKGNFMIDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKSGRLSEPYKGIGDCFKRTIQEEGFGSLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTLQSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKMQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSLDAFSQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVIVFGKKYGSGGA | 845 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 27935947 | 27945032 | + | CePI673135_08g016610.1 | Cec08g1661 | 210303 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec08g1661 | 845 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 119 | 212 | IPR018108 | - | |
| Cec08g1661 | 845 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 324 | 410 | IPR018108 | - | |
| Cec08g1661 | 845 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 224 | 316 | IPR018108 | - | |
| Cec08g1661 | 845 | Gene3D | Mitochondrial carrier domain | 546 | 841 | IPR023395 | - | |
| Cec08g1661 | 845 | Gene3D | Mitochondrial carrier domain | 122 | 414 | IPR023395 | - | |
| Cec08g1661 | 845 | SUPERFAMILY | Mitochondrial carrier | 119 | 406 | IPR023395 | - | |
| Cec08g1661 | 845 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 748 | 834 | IPR018108 | - | |
| Cec08g1661 | 845 | FunFam | ADP,ATP carrier protein, mitochondrial | 546 | 841 | - | - | |
| Cec08g1661 | 845 | Pfam | Mitochondrial carrier protein | 748 | 836 | IPR018108 | - | |
| Cec08g1661 | 845 | Pfam | Mitochondrial carrier protein | 543 | 640 | IPR018108 | - | |
| Cec08g1661 | 845 | Pfam | Mitochondrial carrier protein | 324 | 412 | IPR018108 | - | |
| Cec08g1661 | 845 | Pfam | Mitochondrial carrier protein | 648 | 742 | IPR018108 | - | |
| Cec08g1661 | 845 | Pfam | Mitochondrial carrier protein | 119 | 216 | IPR018108 | - | |
| Cec08g1661 | 845 | Pfam | Mitochondrial carrier protein | 224 | 318 | IPR018108 | - | |
| Cec08g1661 | 845 | PRINTS | Adenine nucleotide translocator signature | 329 | 345 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cec08g1661 | 845 | PRINTS | Adenine nucleotide translocator signature | 121 | 133 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cec08g1661 | 845 | PRINTS | Adenine nucleotide translocator signature | 198 | 210 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cec08g1661 | 845 | PRINTS | Adenine nucleotide translocator signature | 165 | 186 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cec08g1661 | 845 | PRINTS | Adenine nucleotide translocator signature | 224 | 237 | IPR002113 | GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cec08g1661 | 845 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 648 | 740 | IPR018108 | - | |
| Cec08g1661 | 845 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 543 | 636 | IPR018108 | - | |
| Cec08g1661 | 845 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 541 | 842 | IPR002113 | GO:0005471(InterPro)|GO:0005471(PANTHER)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro) | |
| Cec08g1661 | 845 | FunFam | ADP,ATP carrier protein, mitochondrial | 122 | 415 | - | - | |
| Cec08g1661 | 845 | SUPERFAMILY | Mitochondrial carrier | 543 | 830 | IPR023395 | - | |
| Cec08g1661 | 845 | PRINTS | Mitochondrial carrier protein signature | 289 | 307 | IPR002067 | GO:0055085(InterPro) | |
| Cec08g1661 | 845 | PRINTS | Mitochondrial carrier protein signature | 333 | 355 | IPR002067 | GO:0055085(InterPro) | |
| Cec08g1661 | 845 | PRINTS | Mitochondrial carrier protein signature | 187 | 207 | IPR002067 | GO:0055085(InterPro) | |
| Cec08g1661 | 845 | PRINTS | Mitochondrial carrier protein signature | 239 | 257 | IPR002067 | GO:0055085(InterPro) | |
| Cec08g1661 | 845 | PRINTS | Mitochondrial carrier protein signature | 137 | 151 | IPR002067 | GO:0055085(InterPro) | |
| Cec08g1661 | 845 | PRINTS | Mitochondrial carrier protein signature | 124 | 137 | IPR002067 | GO:0055085(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec01g1702 | Cec-Chr1:31655711 | Cec08g1661 | Cec-Chr8:27935947 | 4.60E-109 | dispersed | |
| Cec07g0287 | Cec-Chr7:2828441 | Cec08g1661 | Cec-Chr8:27935947 | 1.10E-162 | dispersed | |
| Cec08g1661 | Cec-Chr8:27935947 | Cec08g1770 | Cec-Chr8:28800226 | 6.10E-31 | dispersed | |
| Cec08g1661 | Cec-Chr8:27935947 | Cec08g1766 | Cec-Chr8:28770578 | 2.30E-54 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec08g1661 | K05863 | - | csv:101203733 | 734.947 |