Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1662 | ATGTCTAATTATGCCTTCTTGAATGACCAGCTCTCGAAGCGGACCTCCATTTTCGGTTTGCGCTTGTGGGTTGTTTTGGGTATTTGCGTTGGTGCCGCCATTGTTATCGTTCTGTTCCTCATTTCGTTATGGTTCACTTCCAGGCGCAACGGTTCCAATAAATCTAAACCCTCTCTGAACCCCACTATCCCAAATGTGTCTAAGGAAATCCAGGAAATACGAATCGATCATTCTCGGAATCCAACTCATTCTGACTCTAAAGTTCAATTAGCTTCTAACCCTGAGCCTTTGCCGGAGGCAGAGCCTTTAGCAACGCTGCTTCAGACGGAAGAAGGGAGCCCACCTAGTGGTCGCCATAGAATTCACATTGAAATTGGGAAGGACCACCGGATTTCGTACCCGGAGAGAGGTGGCGGTTCGTCTCACGGTAGCGGAGAGGCTAGGTCTGGTGATCAGGCGCCAATGGCTGTGCCGGAGGTTTCGCATTTGGGTTGGGGACATTGGTACACTCTCAGAGAGCTTGAGTATGCTACTAATAGTTTTGCGGATGAGAATGTAATTGGTGAGGGCGGATATGGAATTGTGTACCGTGGCGTTATGGAGGACAACACTGTGGTTGCTATCAAAAATTTGCTCAATAACAGAGGACAGGCTGAGAAGGAGTTTAAAGTTGAAGTGGAAGCAATTGGACGCGTACGCCACAAGAATCTGGTGCGTTTGCTCGGCTACTGTGCTGAAGGAGCTCATAGGATACTTGTCTATGAGTACATTGATAACGGAAACTTGGAACAGTGGCTTCATGGAGAAGTTGGACCTTGTAGCCCTCTCACATGGGACATTCGAATGAATATAATTGTTGGAACAGCAAAAGGGTTAACATACCTCCATGAGGGGCTCGAGCCTAAGGTTGTTCACCGTGATATCAAGTCAAGTAACATTTTGCTTGACAAGCAGTGGAATCCAAAGGTCTCTGACTTCGGGCTAGCAAAGCTTCTAGGCTCAGAGAGGAGTTATGTAACAACTCGGGTGATGGGAACTTTTGGATATGTAGCTCCAGAATATGCAAGTACTGGCATGTTAAATGAAAAAAGTGATGTATATAGTTTCGGTATCCTCATCATGGAGATAATTTCAGGGAGAAATCCAGTAGATTATAGCCGCCCTTCAGGAGAGGTCAACCTAGTTGAGTGGCTTAAAACAATGGTAAGTAATCGAAATGCAGAGGGAGTTCTGGATCCTAAGTTACCTGAGAAGCCTTCAACAAGGGCACTGAAGCGTGCTCTGTTAGTAGCTTTACGCTGTGTGGATCCTAATGTTCAGAAAAGGCCTAAAATGGGGCATGTAATTCATATGCTTGAAGCTGACGAGTTTCCTTTCCGAGATGATCGTAGAGTGGGACGAGAACCAGGACGATCACTACTGAAGGAAAAGCTCATGGAAAGGCTTGTGAGTGAATCTGGAGAGAGCAGTGGATACGAAAGTGGAGCAACCCAAGCAAGCCGACATCTACGAGAAAGCAAGAACTTGAAGAACAACAGCCTCGCGAACCTCACACTTTAA | 1560 | 46.35 | MSNYAFLNDQLSKRTSIFGLRLWVVLGICVGAAIVIVLFLISLWFTSRRNGSNKSKPSLNPTIPNVSKEIQEIRIDHSRNPTHSDSKVQLASNPEPLPEAEPLATLLQTEEGSPPSGRHRIHIEIGKDHRISYPERGGGSSHGSGEARSGDQAPMAVPEVSHLGWGHWYTLRELEYATNSFADENVIGEGGYGIVYRGVMEDNTVVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRILVYEYIDNGNLEQWLHGEVGPCSPLTWDIRMNIIVGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNEKSDVYSFGILIMEIISGRNPVDYSRPSGEVNLVEWLKTMVSNRNAEGVLDPKLPEKPSTRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDDRRVGREPGRSLLKEKLMERLVSESGESSGYESGATQASRHLRESKNLKNNSLANLTL | 519 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 27947811 | 27950189 | - | CePI673135_08g016620.1 | Cec08g1662 | 210304 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1662 | 519 | FunFam | Putative receptor-like serine/threonine-protein kinase | 257 | 467 | - | - | |
Cec08g1662 | 519 | CDD | STKc_IRAK | 187 | 453 | - | - | |
Cec08g1662 | 519 | Pfam | Protein kinase domain | 183 | 450 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec08g1662 | 519 | ProSiteProfiles | Protein kinase domain profile. | 181 | 439 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec08g1662 | 519 | PANTHER | OS01G0323000 PROTEIN | 6 | 488 | IPR052232 | - | |
Cec08g1662 | 519 | ProSitePatterns | Protein kinases ATP-binding region signature. | 187 | 209 | IPR017441 | GO:0005524(InterPro) | |
Cec08g1662 | 519 | MobiDBLite | consensus disorder prediction | 483 | 519 | - | - | |
Cec08g1662 | 519 | MobiDBLite | consensus disorder prediction | 130 | 154 | - | - | |
Cec08g1662 | 519 | Gene3D | Transferase(Phosphotransferase) domain 1 | 257 | 463 | - | - | |
Cec08g1662 | 519 | FunFam | Probable serine/threonine-protein kinase At1g01540 | 161 | 256 | - | - | |
Cec08g1662 | 519 | Gene3D | Phosphorylase Kinase; domain 1 | 155 | 256 | - | - | |
Cec08g1662 | 519 | SMART | serkin_6 | 181 | 459 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec08g1662 | 519 | MobiDBLite | consensus disorder prediction | 487 | 502 | - | - | |
Cec08g1662 | 519 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 303 | 315 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec08g1662 | 519 | SUPERFAMILY | Protein kinase-like (PK-like) | 162 | 453 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec05g0161 | Cec-Chr5:1373772 | Cec08g1662 | Cec-Chr8:27947811 | 4.60E-169 | dispersed | |
Cec05g1002 | Cec-Chr5:8799995 | Cec08g1662 | Cec-Chr8:27947811 | 2.10E-72 | dispersed | |
Cec08g1662 | Cec-Chr8:27947811 | Cec09g2350 | Cec-Chr9:40323737 | 3.00E-145 | dispersed | |
Cec02g0544 | Cec-Chr2:5220020 | Cec08g1662 | Cec-Chr8:27947811 | 1.30E-140 | transposed | |
Cec04g1381 | Cec-Chr4:33448330 | Cec08g1662 | Cec-Chr8:27947811 | 2.70E-199 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72219 | PF00069 | Pkinase | 2.50E-47 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1662 | - | - | - | 0.0 |