Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1681 ATGGCAGCGGCAGATAACTGTGTCCGTGTCACTCGTGCTTCCAAGAAGAGAGCTGCGGCGGCCGCCGTAGTCGAGGGCCAATCCGCCAATAAAAAGCGGGTGGTTCTTGGAGAGCTTTCCAACATTCAGAATGTTAATGGGTCAGTGGCCCCACAGAAGAGGAAGGCCAAGTCCCAGATGACTAAATGCAAGCCTAAGAAGAGAGCGAAGGTTGGTGTTGCTCCAACGATGAAGACGACGGTTGTTTCTGAAGATAATGATCCCAAGTTGACCGTTGATGATATTTTGGACGACCCAGAAATGAAGGGGCCTTATTCATCGGATATTTATGCTTATCTTCGCAAAATGGAGGCGGAACCAAAAAGAAGGCCGATTCCAAATTACATAGAGAAGATTCAGACGGATGTAAGTGCTAATATGAGAGGGGTTTTGGTTGATTGGATGGTTGAGGTAGCAGAGGAATACAAGCTTGGCTCCGATACTCTGTATCTATCCATCTCTTACCTCGATAGGTTCTTATCAATGAACATCCTCAGTAGGCAAAGGCTCCAATTGTTGGGGGTTTCTTCAATGCTTATTGCCTCGAAGTATGAAGAGATCACCCCTCCACATGTGGAGGATTTCTGTTACATAACAGATAATACTTACAGAAGGGATGAGGTTGTGAAGATGGAAGCTGATATACTTAAGTCTCTGAACTTTGAAATGGGAAATCCTACTGCCAAGACATTCTTAAGGAGGTTCACTAATATTGCTCAAGAAGATTTCAAAATACCAAATCTGCAGTTGGAGTTTCTTGGTTATTACCTTGCTGAGCTTAGCTTATTGGACTACAATTTTGTGAAGTTCTTGCCTTCTTTGGTTGCTGCCTCTGTCTTATTTCTTGCAAAATTTATCATCCGACCAAAGCTGCATCCTTGGGGTCCAAACATGCAACAATACACAGGCTACAAGCCAGCTGATCTAAGGCCATGTGTGATTCTGTTACATGATCTGTATATGGCCAGAAGAGGGGGGTCTCTGATAGCTGTGAGAGAAAAATACAAGCTACATAGGTTCAAATGTGTTGCAATGATGCCTTCACCTCCCGAGATACCGTTTTCATATTTTGAAGAAGCTTAG 1122 43.85 MAAADNCVRVTRASKKRAAAAAVVEGQSANKKRVVLGELSNIQNVNGSVAPQKRKAKSQMTKCKPKKRAKVGVAPTMKTTVVSEDNDPKLTVDDILDDPEMKGPYSSDIYAYLRKMEAEPKRRPIPNYIEKIQTDVSANMRGVLVDWMVEVAEEYKLGSDTLYLSISYLDRFLSMNILSRQRLQLLGVSSMLIASKYEEITPPHVEDFCYITDNTYRRDEVVKMEADILKSLNFEMGNPTAKTFLRRFTNIAQEDFKIPNLQLEFLGYYLAELSLLDYNFVKFLPSLVAASVLFLAKFIIRPKLHPWGPNMQQYTGYKPADLRPCVILLHDLYMARRGGSLIAVREKYKLHRFKCVAMMPSPPEIPFSYFEEA 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28093077 28094890 - CePI673135_08g016810.1 Cec08g1681 210323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1681 373 SUPERFAMILY Cyclin-like 97 236 IPR036915 -
Cec08g1681 373 CDD CYCLIN_AtCycA-like_rpt2 239 353 - -
Cec08g1681 373 Pfam Cyclin, N-terminal domain 108 236 IPR006671 -
Cec08g1681 373 ProSitePatterns Cyclins signature. 141 172 IPR048258 -
Cec08g1681 373 Gene3D - 124 237 - -
Cec08g1681 373 FunFam Cyclin A1 226 358 - -
Cec08g1681 373 SMART cyclin_7 146 230 IPR013763 -
Cec08g1681 373 SMART cyclin_7 243 331 IPR013763 -
Cec08g1681 373 PANTHER CYCLINS 86 349 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cec08g1681 373 SUPERFAMILY Cyclin-like 239 364 IPR036915 -
Cec08g1681 373 Pfam Cyclin, C-terminal domain 239 361 IPR004367 -
Cec08g1681 373 PIRSF Cyclin_A_B_D_E 1 367 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Cec08g1681 373 SMART Cyclin_C_2 239 362 IPR004367 -
Cec08g1681 373 FunFam Mitotic cyclin 6 124 224 - -
Cec08g1681 373 Gene3D - 108 358 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0619 Cec-Chr8:17738459 Cec08g1681 Cec-Chr8:28093077 1.50E-77 dispersed
Cec08g1329 Cec-Chr8:25223519 Cec08g1681 Cec-Chr8:28093077 8.50E-67 dispersed
Cec08g1681 Cec-Chr8:28093077 Cec09g0240 Cec-Chr9:2086511 3.60E-76 dispersed
Cec02g0707 Cec-Chr2:7403638 Cec08g1681 Cec-Chr8:28093077 2.80E-79 wgd
Cec05g2257 Cec-Chr5:33994556 Cec08g1681 Cec-Chr8:28093077 8.60E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1681 K06627 - csv:101206145 696.041