Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec08g1722 | ATGGAGGACGCCTACGCCAGATCTATCACTGAGGTATTGGATTTCTTTCGGGTTGATCCATCACAAGGTCTCACAGATGATCAGGTTTTACATCATGCTAAACTTTATGGAAAAAACTTGGTTCCTGAGGAGAAAAGGGCCCCATTTTGGAAATTGGTTTTGAAGCAGTTTGATGATTTACTAGTGAAGATATTGATTGTTGCAGCAGTTGTTTCTTTCCTTTTGGCTTTGATAAATGGAGAGACAGGTGTAACAGCATTTTTGGAGCCTTCAGTAATTCTAATGATATTGGCTGCAAACGCAGCAGTCGGGGTGATTACGGAAACAAATGCTGAAAAGGCCCTTGTGTTATACTCTGAACAAAAGAGGACTGTTCTAAGAGATATTGCTATGTTGGACTCGATGGATGAACTGGATGCATGTAGAGTAGAAAATATTAGACCTGAACTACGGGCATACCAGGCAGATATTGCTACTGTGATGAGAAATGGTTGCTTTTCAATACTTCCAGCTACTGAGCTTGTTCCTGGCGATATTGTAGAAGTTGCTGTGGGGTGCAAAATTCCAGCTGATATGAGAATGATTGAGATGCTGACTAATCAGCTACGTGTTGATCAAGCAATTCTCACAGGTGAGAGTTGCTCTGTTGAAAAAGAGCTCGAGTCCACAACAGCAGCAAATGCTGTATATCAAGACAAGACAAATATTCTTTTTTCTGGTACAGTGGTGGTTGCTGGCAGGGCACGAGCTATTGTGGTAGGAGTTGGTGCAAATACTGCCATGGGCAATATACGAGATTCTATATTGCAAACGGATGATGAGGTGACACCGTTGAAAAAGAAGCTCGATGAATTTGGTACCTTCCTGGCCAAGGTTATTGCTGGAATTTGTGCACTAGTATGGATAGTGAACATTGGTCACTTTCGTGATCCTTCACATGGTGGGGTTTTGAGTGGTGCAATACATTACTTCAAGATTGCAGTTGCCCTTGCTGTTGCAGCTATTCCTGAAGGACTTCCTGCTGTTGTCACAACGTGTTTGGCTCTTGGCACCAAACGAATGGCACGTCTGAATGCAATTGTGAGGTCTTTGCCATCTGTTGAGACTTTAGGCTGCACTACTGTTATATGTAGTGACAAGACTGGAACTTTGACTACCAATATGATGTCCATCGCAAAGATTTGTGTGGTCCATTCTGTTTTGCATGGTCCACAACTTTCAGAGTACAATGTCAGTGGTACAACATATGCTCCTGATGGTATTATTTTTGACAGCACGGGAGTACAGCTTGAGTTTCCAGCTCAATTGCCTTGTATTCTACATTTGGCGATGGGGTCTGCCCTCTGCAACGAGTCTACCTTGCAATATAACTCAGACAAGGGAAGCTACGAAAAAATTGGTGAATCAACTGAAGTTGCACTGCGTGTCTTTGCTGAAAAGGTTGGTCTTCCTGGTTTTACTTCTATGCCTTCTGCTCTAAATATGCTCAGCAAGCATGAGCGTGCATCCTATTGTAACCACCATTGGGAGAGCCAGTTCAAAAAGATTTCTGTATTGGAATTTTCTCGCAATCGCAAGATGATGAGCATTTTATGTAGCAGAAACCAGTCACATATCCTATTCTCCAAGGGTGCTCCTGAGAGCATTATTTCAAGATGCTCAAGCATCCTTTGTAATGAAGATGGTTCCACCAGTGTTTTAACTTCTACTATTCGCACTGAACTGGAAGCAAGATTTCAAAGTTTTGCAGGAAATGAAATGCTTAGGTGCCTGGCCATAGCATTCAAATTGCTTCCCTTGAGTCACCAGAGTTTATCCTTTGATGATGAGCAAGATCTAACATTCATTGGGTTGGTTGGAATGCTTGATCCACCGAGAGAGGAAGTGAGAAATGCTATGCTTTCATGCATGACTGCTGGCATACGTGTTATAGTTGTAACTGGGGACAATAAGTCAACTGCTGAATCACTCTGTCGCAAGATTGGTGCTTTTGATCACTTGGTAGATCTAACTGGTCATTCTTACACTGCTTCCGAATTTGAAGAGCTACCTGCAATGCAACAAACAATGGCATTGCAACGAATGGCACTCTTCACCAGGGTTGAACCTTCTCACAAGAGAATGCTCGTGGAGGCCTTACAACATCAGAATGAAGTGGTTGCTATGACAGGCGATGGTGTCAATGATGCACCTGCACTGAAGAAAGCCGATATTGGAATTGCCATGGGTTCAGGAACAGCAGTTGCCAAGAGTGCTTCTGATATGGTCTTAGCTGATGACAATTTTGCTTCTATTGTTGCGGCTGTTGCAGAGGGCAGAGCTATTTACAATAATACTAAGCAGTTCATCAGATACATGATCTCTTCAAATATTGGTGAAGTAGTCTGTATATTTGTGGCAGCTGTTCTTGGAATACCAGAGACACTTGCCCCTGTGCAACTTCTTTGGGTCAACTTGGTCACTGATGGGTTGCCTGCAACTGCAATTGGATTTAACAAGCAAGACTCTGATGTAATGAAAGCTAAGCCTCGAAAGGTGAATGAAGCTGTGGTGACTGGGTGGTTGTTCTTTCGTTATTTGGTAATCGGAGCCTATGTTGGTCTTGCAACAATTGCTGGCTTCATATGGTGGTTTATATACTCGGACACTGGTCCTAAGCTAAATTACTCTGAGTTGATGAATTTTGATACTTGCTCAACCCAAGAGACAACATACTCTTGCAGTATATTCGAGGATCGGCATCCATCGACTGTGTCTATGACTGTGCTTGTTGTTGTCGAGATGTTCAATGCTTTAAATAATCTAAGTGAAAATCAATCTCTTCTTGTTATCCCTCCCTGGAGTAATTTATGGCTCGTTGCCTCCATTGTCATAACCATGATCCTTCACATGCTTATTATGTATGTGCAACCTCTCGCTGTTCTTTTCTCTGTAACGCCATTATCTTGGGCTGAATGGACGATGGTTTTGTATCTTTCATTTCCTGTTATAATTATTGATGAGGTACTGAAGTGCTTTTCACGACGCTCTAGTGGCACTGGCAGGTTGAGGCTTCCATTCAGATTCAGAAGACATGATTTACTTCCAAAGAAGGAATTGCATGACAACACTCTAAGCTACCGGTCCGTTAATAATATCACATCACAACACAACAATCATGAAGAGAAAGCGGCAAAGATGAATGTGCTGGAAAAAAAAATTCCTCAAGGAATTTGGTCAACTCCATCATTTGAATATCTCTCCTTTTGCCCCCACAAGAATCTGCAGAAGATCTTAAGGGATAACAAAGGAAATAAGAACCATGTTCGTGTCAAAATCTTTGAAATGAAACTCATGACCCCCCACCATCCATGGAAAGTTGGAAACGCTGCACGCCCACAGCCCTAA | 3387 | 42.4 | MEDAYARSITEVLDFFRVDPSQGLTDDQVLHHAKLYGKNLVPEEKRAPFWKLVLKQFDDLLVKILIVAAVVSFLLALINGETGVTAFLEPSVILMILAANAAVGVITETNAEKALVLYSEQKRTVLRDIAMLDSMDELDACRVENIRPELRAYQADIATVMRNGCFSILPATELVPGDIVEVAVGCKIPADMRMIEMLTNQLRVDQAILTGESCSVEKELESTTAANAVYQDKTNILFSGTVVVAGRARAIVVGVGANTAMGNIRDSILQTDDEVTPLKKKLDEFGTFLAKVIAGICALVWIVNIGHFRDPSHGGVLSGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSIAKICVVHSVLHGPQLSEYNVSGTTYAPDGIIFDSTGVQLEFPAQLPCILHLAMGSALCNESTLQYNSDKGSYEKIGESTEVALRVFAEKVGLPGFTSMPSALNMLSKHERASYCNHHWESQFKKISVLEFSRNRKMMSILCSRNQSHILFSKGAPESIISRCSSILCNEDGSTSVLTSTIRTELEARFQSFAGNEMLRCLAIAFKLLPLSHQSLSFDDEQDLTFIGLVGMLDPPREEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHLVDLTGHSYTASEFEELPAMQQTMALQRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPETLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFIYSDTGPKLNYSELMNFDTCSTQETTYSCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIVITMILHMLIMYVQPLAVLFSVTPLSWAEWTMVLYLSFPVIIIDEVLKCFSRRSSGTGRLRLPFRFRRHDLLPKKELHDNTLSYRSVNNITSQHNNHEEKAAKMNVLEKKIPQGIWSTPSFEYLSFCPHKNLQKILRDNKGNKNHVRVKIFEMKLMTPHHPWKVGNAARPQP | 1128 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 28321518 | 28346868 | + | CePI673135_08g017220.1 | Cec08g1722 | 210364 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec08g1722 | 1128 | Gene3D | - | 270 | 1008 | - | - | |
| Cec08g1722 | 1128 | SUPERFAMILY | HAD-like | 610 | 771 | IPR036412 | - | |
| Cec08g1722 | 1128 | SFLD | Haloacid Dehalogenase | 358 | 775 | - | - | |
| Cec08g1722 | 1128 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 1 | 1010 | IPR023298 | - | |
| Cec08g1722 | 1128 | FunFam | Calcium-transporting ATPase | 144 | 269 | - | - | |
| Cec08g1722 | 1128 | Gene3D | - | 374 | 767 | IPR023214 | - | |
| Cec08g1722 | 1128 | FunFam | Calcium-transporting ATPase | 387 | 624 | - | - | |
| Cec08g1722 | 1128 | SFLD | p-type atpase | 358 | 775 | IPR044492 | - | |
| Cec08g1722 | 1128 | SUPERFAMILY | Calcium ATPase, transduction domain A | 156 | 267 | IPR008250 | - | |
| Cec08g1722 | 1128 | CDD | P-type_ATPase_SERCA | 5 | 1008 | - | - | |
| Cec08g1722 | 1128 | Gene3D | - | 55 | 131 | - | - | |
| Cec08g1722 | 1128 | PANTHER | CALCIUM-TRANSPORTING ATPASE | 142 | 1015 | - | GO:0005388(PANTHER)|GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0070588(PANTHER) | |
| Cec08g1722 | 1128 | SMART | Cation_ATPase_N_a_2 | 3 | 77 | IPR004014 | - | |
| Cec08g1722 | 1128 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 384 | 621 | IPR023299 | GO:0000166(InterPro) | |
| Cec08g1722 | 1128 | FunFam | Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 | 719 | 1011 | - | - | |
| Cec08g1722 | 1128 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 379 | 385 | IPR018303 | - | |
| Cec08g1722 | 1128 | FunFam | Calcium-transporting ATPase, putative | 242 | 373 | - | - | |
| Cec08g1722 | 1128 | Pfam | Cation transporting ATPase, C-terminus | 807 | 1006 | IPR006068 | - | |
| Cec08g1722 | 1128 | PRINTS | P-type cation-transporting ATPase superfamily signature | 205 | 219 | - | - | |
| Cec08g1722 | 1128 | PRINTS | P-type cation-transporting ATPase superfamily signature | 377 | 391 | - | - | |
| Cec08g1722 | 1128 | PRINTS | P-type cation-transporting ATPase superfamily signature | 746 | 758 | - | - | |
| Cec08g1722 | 1128 | PRINTS | P-type cation-transporting ATPase superfamily signature | 639 | 649 | - | - | |
| Cec08g1722 | 1128 | PRINTS | P-type cation-transporting ATPase superfamily signature | 723 | 742 | - | - | |
| Cec08g1722 | 1128 | PRINTS | P-type cation-transporting ATPase superfamily signature | 617 | 628 | - | - | |
| Cec08g1722 | 1128 | FunFam | Sodium/potassium-transporting ATPase subunit alpha | 616 | 762 | - | - | |
| Cec08g1722 | 1128 | Pfam | Cation transporter/ATPase, N-terminus | 5 | 72 | IPR004014 | - | |
| Cec08g1722 | 1128 | NCBIfam | calcium-translocating P-type ATPase, SERCA-type | 144 | 878 | IPR005782 | GO:0005388(InterPro)|GO:0006816(InterPro)|GO:0016020(InterPro) | |
| Cec08g1722 | 1128 | Pfam | Cation transport ATPase (P-type) | 447 | 556 | - | - | |
| Cec08g1722 | 1128 | Gene3D | - | 387 | 624 | IPR023299 | GO:0000166(InterPro) | |
| Cec08g1722 | 1128 | NCBIfam | HAD-IC family P-type ATPase | 693 | 811 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec08g1722 | 1128 | NCBIfam | HAD-IC family P-type ATPase | 141 | 398 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec08g1722 | 1128 | Gene3D | - | 146 | 269 | - | - | |
| Cec08g1722 | 1128 | Pfam | E1-E2 ATPase | 154 | 356 | - | - | |
| Cec08g1722 | 1128 | Pfam | haloacid dehalogenase-like hydrolase | 614 | 737 | - | - | |
| Cec08g1722 | 1128 | PRINTS | H+-transporting ATPase (proton pump) signature | 695 | 711 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec08g1722 | 1128 | PRINTS | H+-transporting ATPase (proton pump) signature | 723 | 739 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
| Cec08g1722 | 1128 | PRINTS | H+-transporting ATPase (proton pump) signature | 754 | 779 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec08g1722 | Cec-Chr8:28321518 | Cec11g1193 | Cec-Chr11:24541914 | 3.70E-84 | dispersed | |
| Cec03g0176 | Cec-Chr3:1818080 | Cec08g1722 | Cec-Chr8:28321518 | 8.00E-222 | transposed | |
| Cec05g1931 | Cec-Chr5:31385969 | Cec08g1722 | Cec-Chr8:28321518 | 2.90E-53 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec08g1722 | K05853 | - | csv:101211345 | 1875.14 |