Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1722 ATGGAGGACGCCTACGCCAGATCTATCACTGAGGTATTGGATTTCTTTCGGGTTGATCCATCACAAGGTCTCACAGATGATCAGGTTTTACATCATGCTAAACTTTATGGAAAAAACTTGGTTCCTGAGGAGAAAAGGGCCCCATTTTGGAAATTGGTTTTGAAGCAGTTTGATGATTTACTAGTGAAGATATTGATTGTTGCAGCAGTTGTTTCTTTCCTTTTGGCTTTGATAAATGGAGAGACAGGTGTAACAGCATTTTTGGAGCCTTCAGTAATTCTAATGATATTGGCTGCAAACGCAGCAGTCGGGGTGATTACGGAAACAAATGCTGAAAAGGCCCTTGTGTTATACTCTGAACAAAAGAGGACTGTTCTAAGAGATATTGCTATGTTGGACTCGATGGATGAACTGGATGCATGTAGAGTAGAAAATATTAGACCTGAACTACGGGCATACCAGGCAGATATTGCTACTGTGATGAGAAATGGTTGCTTTTCAATACTTCCAGCTACTGAGCTTGTTCCTGGCGATATTGTAGAAGTTGCTGTGGGGTGCAAAATTCCAGCTGATATGAGAATGATTGAGATGCTGACTAATCAGCTACGTGTTGATCAAGCAATTCTCACAGGTGAGAGTTGCTCTGTTGAAAAAGAGCTCGAGTCCACAACAGCAGCAAATGCTGTATATCAAGACAAGACAAATATTCTTTTTTCTGGTACAGTGGTGGTTGCTGGCAGGGCACGAGCTATTGTGGTAGGAGTTGGTGCAAATACTGCCATGGGCAATATACGAGATTCTATATTGCAAACGGATGATGAGGTGACACCGTTGAAAAAGAAGCTCGATGAATTTGGTACCTTCCTGGCCAAGGTTATTGCTGGAATTTGTGCACTAGTATGGATAGTGAACATTGGTCACTTTCGTGATCCTTCACATGGTGGGGTTTTGAGTGGTGCAATACATTACTTCAAGATTGCAGTTGCCCTTGCTGTTGCAGCTATTCCTGAAGGACTTCCTGCTGTTGTCACAACGTGTTTGGCTCTTGGCACCAAACGAATGGCACGTCTGAATGCAATTGTGAGGTCTTTGCCATCTGTTGAGACTTTAGGCTGCACTACTGTTATATGTAGTGACAAGACTGGAACTTTGACTACCAATATGATGTCCATCGCAAAGATTTGTGTGGTCCATTCTGTTTTGCATGGTCCACAACTTTCAGAGTACAATGTCAGTGGTACAACATATGCTCCTGATGGTATTATTTTTGACAGCACGGGAGTACAGCTTGAGTTTCCAGCTCAATTGCCTTGTATTCTACATTTGGCGATGGGGTCTGCCCTCTGCAACGAGTCTACCTTGCAATATAACTCAGACAAGGGAAGCTACGAAAAAATTGGTGAATCAACTGAAGTTGCACTGCGTGTCTTTGCTGAAAAGGTTGGTCTTCCTGGTTTTACTTCTATGCCTTCTGCTCTAAATATGCTCAGCAAGCATGAGCGTGCATCCTATTGTAACCACCATTGGGAGAGCCAGTTCAAAAAGATTTCTGTATTGGAATTTTCTCGCAATCGCAAGATGATGAGCATTTTATGTAGCAGAAACCAGTCACATATCCTATTCTCCAAGGGTGCTCCTGAGAGCATTATTTCAAGATGCTCAAGCATCCTTTGTAATGAAGATGGTTCCACCAGTGTTTTAACTTCTACTATTCGCACTGAACTGGAAGCAAGATTTCAAAGTTTTGCAGGAAATGAAATGCTTAGGTGCCTGGCCATAGCATTCAAATTGCTTCCCTTGAGTCACCAGAGTTTATCCTTTGATGATGAGCAAGATCTAACATTCATTGGGTTGGTTGGAATGCTTGATCCACCGAGAGAGGAAGTGAGAAATGCTATGCTTTCATGCATGACTGCTGGCATACGTGTTATAGTTGTAACTGGGGACAATAAGTCAACTGCTGAATCACTCTGTCGCAAGATTGGTGCTTTTGATCACTTGGTAGATCTAACTGGTCATTCTTACACTGCTTCCGAATTTGAAGAGCTACCTGCAATGCAACAAACAATGGCATTGCAACGAATGGCACTCTTCACCAGGGTTGAACCTTCTCACAAGAGAATGCTCGTGGAGGCCTTACAACATCAGAATGAAGTGGTTGCTATGACAGGCGATGGTGTCAATGATGCACCTGCACTGAAGAAAGCCGATATTGGAATTGCCATGGGTTCAGGAACAGCAGTTGCCAAGAGTGCTTCTGATATGGTCTTAGCTGATGACAATTTTGCTTCTATTGTTGCGGCTGTTGCAGAGGGCAGAGCTATTTACAATAATACTAAGCAGTTCATCAGATACATGATCTCTTCAAATATTGGTGAAGTAGTCTGTATATTTGTGGCAGCTGTTCTTGGAATACCAGAGACACTTGCCCCTGTGCAACTTCTTTGGGTCAACTTGGTCACTGATGGGTTGCCTGCAACTGCAATTGGATTTAACAAGCAAGACTCTGATGTAATGAAAGCTAAGCCTCGAAAGGTGAATGAAGCTGTGGTGACTGGGTGGTTGTTCTTTCGTTATTTGGTAATCGGAGCCTATGTTGGTCTTGCAACAATTGCTGGCTTCATATGGTGGTTTATATACTCGGACACTGGTCCTAAGCTAAATTACTCTGAGTTGATGAATTTTGATACTTGCTCAACCCAAGAGACAACATACTCTTGCAGTATATTCGAGGATCGGCATCCATCGACTGTGTCTATGACTGTGCTTGTTGTTGTCGAGATGTTCAATGCTTTAAATAATCTAAGTGAAAATCAATCTCTTCTTGTTATCCCTCCCTGGAGTAATTTATGGCTCGTTGCCTCCATTGTCATAACCATGATCCTTCACATGCTTATTATGTATGTGCAACCTCTCGCTGTTCTTTTCTCTGTAACGCCATTATCTTGGGCTGAATGGACGATGGTTTTGTATCTTTCATTTCCTGTTATAATTATTGATGAGGTACTGAAGTGCTTTTCACGACGCTCTAGTGGCACTGGCAGGTTGAGGCTTCCATTCAGATTCAGAAGACATGATTTACTTCCAAAGAAGGAATTGCATGACAACACTCTAAGCTACCGGTCCGTTAATAATATCACATCACAACACAACAATCATGAAGAGAAAGCGGCAAAGATGAATGTGCTGGAAAAAAAAATTCCTCAAGGAATTTGGTCAACTCCATCATTTGAATATCTCTCCTTTTGCCCCCACAAGAATCTGCAGAAGATCTTAAGGGATAACAAAGGAAATAAGAACCATGTTCGTGTCAAAATCTTTGAAATGAAACTCATGACCCCCCACCATCCATGGAAAGTTGGAAACGCTGCACGCCCACAGCCCTAA 3387 42.4 MEDAYARSITEVLDFFRVDPSQGLTDDQVLHHAKLYGKNLVPEEKRAPFWKLVLKQFDDLLVKILIVAAVVSFLLALINGETGVTAFLEPSVILMILAANAAVGVITETNAEKALVLYSEQKRTVLRDIAMLDSMDELDACRVENIRPELRAYQADIATVMRNGCFSILPATELVPGDIVEVAVGCKIPADMRMIEMLTNQLRVDQAILTGESCSVEKELESTTAANAVYQDKTNILFSGTVVVAGRARAIVVGVGANTAMGNIRDSILQTDDEVTPLKKKLDEFGTFLAKVIAGICALVWIVNIGHFRDPSHGGVLSGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSIAKICVVHSVLHGPQLSEYNVSGTTYAPDGIIFDSTGVQLEFPAQLPCILHLAMGSALCNESTLQYNSDKGSYEKIGESTEVALRVFAEKVGLPGFTSMPSALNMLSKHERASYCNHHWESQFKKISVLEFSRNRKMMSILCSRNQSHILFSKGAPESIISRCSSILCNEDGSTSVLTSTIRTELEARFQSFAGNEMLRCLAIAFKLLPLSHQSLSFDDEQDLTFIGLVGMLDPPREEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHLVDLTGHSYTASEFEELPAMQQTMALQRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPETLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFIYSDTGPKLNYSELMNFDTCSTQETTYSCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIVITMILHMLIMYVQPLAVLFSVTPLSWAEWTMVLYLSFPVIIIDEVLKCFSRRSSGTGRLRLPFRFRRHDLLPKKELHDNTLSYRSVNNITSQHNNHEEKAAKMNVLEKKIPQGIWSTPSFEYLSFCPHKNLQKILRDNKGNKNHVRVKIFEMKLMTPHHPWKVGNAARPQP 1128
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 28321518 28346868 + CePI673135_08g017220.1 Cec08g1722 210364
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1722 1128 Gene3D - 270 1008 - -
Cec08g1722 1128 SUPERFAMILY HAD-like 610 771 IPR036412 -
Cec08g1722 1128 SFLD Haloacid Dehalogenase 358 775 - -
Cec08g1722 1128 SUPERFAMILY Calcium ATPase, transmembrane domain M 1 1010 IPR023298 -
Cec08g1722 1128 FunFam Calcium-transporting ATPase 144 269 - -
Cec08g1722 1128 Gene3D - 374 767 IPR023214 -
Cec08g1722 1128 FunFam Calcium-transporting ATPase 387 624 - -
Cec08g1722 1128 SFLD p-type atpase 358 775 IPR044492 -
Cec08g1722 1128 SUPERFAMILY Calcium ATPase, transduction domain A 156 267 IPR008250 -
Cec08g1722 1128 CDD P-type_ATPase_SERCA 5 1008 - -
Cec08g1722 1128 Gene3D - 55 131 - -
Cec08g1722 1128 PANTHER CALCIUM-TRANSPORTING ATPASE 142 1015 - GO:0005388(PANTHER)|GO:0006874(PANTHER)|GO:0015662(PANTHER)|GO:0016021(PANTHER)|GO:0034220(PANTHER)|GO:0070588(PANTHER)
Cec08g1722 1128 SMART Cation_ATPase_N_a_2 3 77 IPR004014 -
Cec08g1722 1128 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 384 621 IPR023299 GO:0000166(InterPro)
Cec08g1722 1128 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 719 1011 - -
Cec08g1722 1128 ProSitePatterns E1-E2 ATPases phosphorylation site. 379 385 IPR018303 -
Cec08g1722 1128 FunFam Calcium-transporting ATPase, putative 242 373 - -
Cec08g1722 1128 Pfam Cation transporting ATPase, C-terminus 807 1006 IPR006068 -
Cec08g1722 1128 PRINTS P-type cation-transporting ATPase superfamily signature 205 219 - -
Cec08g1722 1128 PRINTS P-type cation-transporting ATPase superfamily signature 377 391 - -
Cec08g1722 1128 PRINTS P-type cation-transporting ATPase superfamily signature 746 758 - -
Cec08g1722 1128 PRINTS P-type cation-transporting ATPase superfamily signature 639 649 - -
Cec08g1722 1128 PRINTS P-type cation-transporting ATPase superfamily signature 723 742 - -
Cec08g1722 1128 PRINTS P-type cation-transporting ATPase superfamily signature 617 628 - -
Cec08g1722 1128 FunFam Sodium/potassium-transporting ATPase subunit alpha 616 762 - -
Cec08g1722 1128 Pfam Cation transporter/ATPase, N-terminus 5 72 IPR004014 -
Cec08g1722 1128 NCBIfam calcium-translocating P-type ATPase, SERCA-type 144 878 IPR005782 GO:0005388(InterPro)|GO:0006816(InterPro)|GO:0016020(InterPro)
Cec08g1722 1128 Pfam Cation transport ATPase (P-type) 447 556 - -
Cec08g1722 1128 Gene3D - 387 624 IPR023299 GO:0000166(InterPro)
Cec08g1722 1128 NCBIfam HAD-IC family P-type ATPase 693 811 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec08g1722 1128 NCBIfam HAD-IC family P-type ATPase 141 398 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec08g1722 1128 Gene3D - 146 269 - -
Cec08g1722 1128 Pfam E1-E2 ATPase 154 356 - -
Cec08g1722 1128 Pfam haloacid dehalogenase-like hydrolase 614 737 - -
Cec08g1722 1128 PRINTS H+-transporting ATPase (proton pump) signature 695 711 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec08g1722 1128 PRINTS H+-transporting ATPase (proton pump) signature 723 739 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cec08g1722 1128 PRINTS H+-transporting ATPase (proton pump) signature 754 779 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1722 Cec-Chr8:28321518 Cec11g1193 Cec-Chr11:24541914 3.70E-84 dispersed
Cec03g0176 Cec-Chr3:1818080 Cec08g1722 Cec-Chr8:28321518 8.00E-222 transposed
Cec05g1931 Cec-Chr5:31385969 Cec08g1722 Cec-Chr8:28321518 2.90E-53 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1722 K05853 - csv:101211345 1875.14