Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1743 | ATGATCACCGAATCAATGCTCCTCAATCCGACGGTTCACATTTCATCCAGGGACTCCCCCGACGATCCCGCCGCCGCATTCCCTTCTTATTTCACCGCCGGTCACGTGTCGCCCCTCGATTCGCCCACGGCGGCGCTCATGGACTTCGATTCATCCTTCTGGGAAGATCCAGACTTGCCGTCGGCTGTGGACGCCTTCTCGTGCGACCAGTTCCGGATGTATGAGTTCAAAGTCCGCACGTGCGCACGTGGGAGGTCGCACGATTGGACTAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGCCGAGATCCCAGGAAGTTCAACTATTCCGGCACAGAGTGCCCGGATTTACGCCATGGGTGTTGTAAAAAAGGAGACGCTTGTGAGTACGCTCATGGAGTTTTCGAAAGTTGGCTTCACCCGGACCGGTACCGGACTCAACCGTGCCGTGACGGAACCGGATGCCGACGACGGGTCTGTTTCTTCGCTCACTCGTCGGAGCAGCTCCGGATTCCGGGGAAACAGAGTCTCAGATCTCCACGGGCGAGAGAAATCGCTGTCCCTGCTGTATCATCGCCGACGTCGATCCTAATGTCGCCGTCATCGGACTCGCCGCCTATGTCTCCGATCAGCCCTGTAATCAGCGGCGGCGAATCGTTCAGTAGATTAGTCGCATTGATGCACAGTTTTCACCTGGATGAACTGAAAACGAATCCAGCCGTCTCCGGCTTCAGTCCAGGTCTCCGGCGGAACTCCGGCGCATTTGATCTGTGGGACAGAGAAAATGAAGAAGAACCAGCAATGGAGAGAGTAGAATCAGGGAGAAACCTACGAGCCCAAATGTACGCGAAATTAATGAGAGAGAATTCAGTGGACCGAGTCCGGCCACTGATATCGGCCGGATCACGTAACTAA | 921 | 55.92 | MITESMLLNPTVHISSRDSPDDPAAAFPSYFTAGHVSPLDSPTAALMDFDSSFWEDPDLPSAVDAFSCDQFRMYEFKVRTCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGTECPDLRHGCCKKGDACEYAHGVFESWLHPDRYRTQPCRDGTGCRRRVCFFAHSSEQLRIPGKQSLRSPRAREIAVPAVSSPTSILMSPSSDSPPMSPISPVISGGESFSRLVALMHSFHLDELKTNPAVSGFSPGLRRNSGAFDLWDRENEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLISAGSRN | 306 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 28576288 | 28577208 | + | CePI673135_08g017430.1 | Cec08g1743 | 210385 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1743 | 306 | FunFam | Zinc finger CCCH domain-containing protein 66 | 68 | 136 | - | - | |
Cec08g1743 | 306 | ProSiteProfiles | Zinc finger C3H1-type profile. | 110 | 137 | IPR000571 | GO:0046872(InterPro) | |
Cec08g1743 | 306 | PANTHER | UNKEMPT FAMILY MEMBER | 52 | 229 | IPR045234 | - | |
Cec08g1743 | 306 | SMART | c3hfinal6 | 110 | 136 | IPR000571 | GO:0046872(InterPro) | |
Cec08g1743 | 306 | SMART | c3hfinal6 | 145 | 168 | IPR000571 | GO:0046872(InterPro) | |
Cec08g1743 | 306 | Gene3D | - | 107 | 178 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1743 | Cec-Chr8:28576288 | Cec11g0201 | Cec-Chr11:2165280 | 2.90E-63 | dispersed | |
Cec03g1649 | Cec-Chr3:34662962 | Cec08g1743 | Cec-Chr8:28576288 | 5.70E-69 | wgd | |
Cec05g1948 | Cec-Chr5:31562905 | Cec08g1743 | Cec-Chr8:28576288 | 2.20E-75 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1743 | - | - | - | 0.0 |