Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1761 ATGTTGAAGCTATTATCCTCATCTCACCGCATTTCCATCTTCATCTTCATCTTCCTCTGCTCTCCGCCGCTGCTTTCTTCCGCCGCTCTTCCCCTCTCCGACTCCGGTCATCAGCTTATCGCTAACGCTACCCTCCAGTCTAATAATGTATCCGTTCCGAGGAATAAGGAGGGCAGTTTTGCTGACATCATTGATCGTGCTTTGGAGAATGAATTCAAGGAGAATGACCAGAATGAAGCAATTGATGCAGGAAGTTTCAACAACAGTGTAGCGGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAACGTTTTCAATTTGGACAGTGATAATAGAGCTGAAGACACTCCTACATTGATTGATCGAAAGGATAATGTCTTTATAATATCTAACTTCAAGTCTAAATATCCAGTGCTACAATTAGACTTGAGATTGATCTCTGATTTGGTAATCGTAATTGTCTCTGCAACTTGTGGTGGCATTGCCTTCGCATGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCTGGAGGATTTAACTTCGTCAGTGAAATGGTTCAAGTTGAAACGGTAGCTCAATTTGGTGTAATTTTTCTTCTTTTTGCACTGGGGTTGGAGTTTTCAACAGCTAAGCTTCGAGTTGTTCGTGCAGTTGCTGTTCTTGGTGGCCTGCTCCAAATTTTCCTGTTTATGTGCCTCAGTGGGATCACAGCCTCGTCATGCGGTGGGAGTGCTTCTGAAGGGGTTTTTGTTGGAGCATTTCTATCAATGTCCTCAACAGCAGTGGTGCTGAAGTTTTTGATGGAAAAGAACTCAACTAATGCTCTTCATGGACAAGTCACAATTGGCACCCTTATTCTGCAGGACTGTGCTGTTGGGTTACTGTTTGCTTTGCTTCCAGTACTAGGTGGGAATTCTGGTATTCTTCAAGGAGTAATATCCATGAGTAAAGTGTTGGTGACCTTGGTTACTTTTTTGGTTGCTTTGTCAATTTTATCCCGTACATGTATTCCCTGGCTTTTAAAGTTGATGATAAGTCTATCATCGCAGACCAATGAACTCTATCAATTAGCCTCCGTGGCGTTCTGCTTGCTCGTAGCATGGTGTAGTGATAAGTTGGGGCTGAGTCTAGAATTGGGTTCCTTTGCTGCTGGAGTGATGATATCGACAACTGATCTTGCTCAACACACACTTGAACAAATAGAGCCTATAAGGAACCTTTTTGCAGCCCTTTTTCTTGCCAGCATTGGAATGCTGATCCACGTTCAGTTTTTGTGGAACCATGTCGATATATTACTAGCAGCTGTTATACTGGTGATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGGTATAACAACAGGACAGCACTCCTGGTTGGAATGTCTCTGGCTCAGATAGGAGAATTTGCTTTTGTTCTTCTCAGCCGCGCTTCTAATCTTCATCTAGTTGAGGGGAAACTGTATCTATTGCTTATTGGGACCACAGCCCTCAGTCTGGTGACAACTCCTTTTCTTTTCAAGCTGATACCTGCTGTAGTACATTTAGGCGTGCTATTGCGGTGGTTCTCTCCAGATAGTCTCGTTGAGATTGGATTCAAAGGAGATATCATCCGTTCAGACAGTGTAAAGCAGCGAGTTATCCTTCCATTGCTACTTCAAGACCCTTCATCAGATGGTCATCAGCAAAAGGAAAAAGAAAAAAAGGTCCAAGGCTTAACTGCCATTTACCTTCTTGCTAATAGCAACAACTTTGTTCCTGACGGCTTGCACAAATGTTAA 1863 42.78 MLKLLSSSHRISIFIFIFLCSPPLLSSAALPLSDSGHQLIANATLQSNNVSVPRNKEGSFADIIDRALENEFKENDQNEAIDAGSFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDSDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTAKLRVVRAVAVLGGLLQIFLFMCLSGITASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVISMSKVLVTLVTFLVALSILSRTCIPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNLFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTALLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPFLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSDSVKQRVILPLLLQDPSSDGHQQKEKEKKVQGLTAIYLLANSNNFVPDGLHKC 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28715086 28725118 - CePI673135_08g017610.1 Cec08g1761 210403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1761 620 Pfam Sodium/hydrogen exchanger family 169 535 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Cec08g1761 620 Gene3D - 159 542 IPR038770 -
Cec08g1761 620 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 44 569 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g0200 Cec-Chr5:1652240 Cec08g1761 Cec-Chr8:28715086 2.80E-37 transposed
Cec05g0904 Cec-Chr5:7792611 Cec08g1761 Cec-Chr8:28715086 4.90E-185 transposed
Cec09g1769 Cec-Chr9:33317098 Cec08g1761 Cec-Chr8:28715086 1.90E-29 transposed
Cec03g1628 Cec-Chr3:34440672 Cec08g1761 Cec-Chr8:28715086 8.60E-234 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1761 K26735 - csv:101217282 1000.73