Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1764 ATGTTCTTCATTGAGGATTTGTGGCAGATGCTCTTCGTTCGAGGTTTCCAGGATACAACTCGACTTCTCTCTGAGTCTTTTATACGGACCATATCCGAATCCATGGCCAATTCATCTTGTGGGGTCTCGGAATTAGAACTCTGTAGGAACGATACGGCTGCGCTCCATTTCAAATTAGTCGCCATCGCCTCGATTCTAACATCGGGAGTCATCGGAATCGCCATTCCGTTGTTTGGTAGACAGAGTCGGTTCCTCAAAACAGACGGCAACCTGTTTGTGGCGGCGAAGGCGTTTGCCGCCGGTGTGATTCTAGCCACCGCCTTCGTCCATATGCTTCCGGATGGATCGAAGGCCCTCTCCGATCCGTGCTTGCCGGAATTTCCTTGGTCTAAATTCCCCTTCTCTGGATTCTTCGCGATGATGGCGTCGCTGTTGACGCTCCTCGTCGATTTCGTCGGAACTCAGTACTACGAGCGGAAACAGGGGATGATTCGGTCGAAAGAGGAGGCGAATCGGGTCGGGTCGATTATGGATTCCGGGTTGGAATCCGGCATTGTTCCGGCCGGAGATTTGAACGTGAAAGTGTTTGGGGAAGAGGACGGCGGCGCGATGCACATTGTCGGAATGCATGCCCACGCCGCCCACCACCGGCACAATCATCCACAGGGGAAGCAGGCATGTGATGGGCACGTGACGGGTCATGATCATGGGCATGGGCACGGGCATGCCCATGGACATGTTCATTCTCATGGGCTGGACGGCGACGATGACGAAAGCGGTGTACGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTCATAATTGGGCTATCTCTTGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCTCTCTCCTTCCATCAGTTCTTTGAAGGCTTTGCCCTTGGTGGCTGCATTTCTCAGGCTCAATTCAACACCCTCTCCACCTCCCTGATGGCTGTCTTCTTCGCCATCACCACGCCCCTCGGCATCTCCATAGGCGCTGCCGTTGCCTCCACCTACAACCCCAACAGCACTGGGGCATTGGTTGCTGAAGGCATTTTGGACTCTCTATCGGCCGGAATTTTGGTGTACATGGCTCTGGTTGATTTGATTGCGGCCGACTTTCTTAGCAAAAGAATGAGCTGCAATTTTAGACTCCAAATTGTTTCGTATTGTACTCTCTTCCTCGGCGCGGGGTTGATGTCTTCGCTTGCGCTTTGGGCTTGA 1260 52.78 MFFIEDLWQMLFVRGFQDTTRLLSESFIRTISESMANSSCGVSELELCRNDTAALHFKLVAIASILTSGVIGIAIPLFGRQSRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSKALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGMIRSKEEANRVGSIMDSGLESGIVPAGDLNVKVFGEEDGGAMHIVGMHAHAAHHRHNHPQGKQACDGHVTGHDHGHGHGHAHGHVHSHGLDGDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPLGISIGAAVASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCTLFLGAGLMSSLALWA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28758495 28761267 - CePI673135_08g017640.1 Cec08g1764 210406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1764 419 NCBIfam ZIP zinc/iron transport family 40 419 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Cec08g1764 419 PANTHER ZINC/IRON TRANSPORTER 52 418 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Cec08g1764 419 MobiDBLite consensus disorder prediction 235 254 - -
Cec08g1764 419 Pfam ZIP Zinc transporter 56 416 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1764 Cec-Chr8:28758495 Cec11g1736 Cec-Chr11:31629521 2.10E-72 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1764 K14709 - csv:101218224 749.969