Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1790 ATGAAGCTTGAAGTTCGAGCTGCTGATTGCGACCAAGACCAAGTATTACCAATCCCATTGAGAAAGCAAGCAATCTCCACTGAAGTAGGAATAATTAGAAAAGTAACTGCCAACTGGTTATCCAACTTGTTCGTACCTTTTGTAACCTCGTTGGCTTGGATTTGTCTCCGTCTCAACTCTCTTCCCTTCGCGTACTTGTATGTCCCCCTCCACTTTACTAATTGGTATGATGACCCGGGTGCGAACTATGATGTTGAAGCTCAGGCTAAGGTGGTGGGCTCGTCGTTCCTTCATACTCCGCACGCTCGCTCTCCCAAGTCCCATCTTTCTCGAAATTTCACGGAATTCCCTGAATCAGAGACTATGTACTTGTCTGATAAGCCTCGCCCAATCGATATTTACAAGGAAGAAGGTAGCAGAGATATGATGATCGAGGTCGCCTCCAATGGCGACCACCATATTCAACCTCATCAGCCACAGCCACAGCCACAGCAGACTCATCAGCAGCACCAAATGATGCTTGGTGACAGCAGTGGTGAGGATCATGAAGTCAAGGCTCCCAAGAAGCGGGCGGAGACTTGGGTTCAGGATGAGACTCGAAGCTTAATTGCCCTACGCCGGGAGATGGATGGCTTGTTTAATACTTCGAAATCCAACAAACATTTGTGGGAGCAGATATCGGCTAAGATGAGGGAAAGGGGATTTGATCGCTCTCCGACTATGTGTACTGATAAGTGGAGGAACTTGCTCAAGGAGTTCAAGAAAGCAAAGCACCATGACAGGGGAAGTGGCTCTGCTAAGATGTCGTGTTACAAGGAGATTGAAGAAATTTTGAAGGAGAGAAGCAAAAGTACGCAGTACAAGAGTCCCACGCCACCCAAGATTGATTCATATATGCAATTCTCAGACAAAGGAATAGAGGATAATGGTCTATCGTTCGGACCTGTTGAAGGTGGCAGACCTTCACTCAATCTTGAAAGACAACTAGATCACGATGGACATCCCCTTGCCATCACAGCAGCTGATGCAGTTGCTGCTACGGGCATTCCACCTTGGAATTGGAGGGAGGCATCAGGAAATGGTGGGGAGAGTCAAGCATTTGGCGGGAGAGTAATATCAGTGAAGTGGGGGGACTACACAAGAAGAATTGGTGTTGATGGCACCTCAGAGGCAATCAAGGAGGCAATCAAGTCTGCATTCAGATTGAGAACTAAACGTGCATTTTGGTTAGAGGATGAGGACCAGGTTGTCAGAAGTCTGGACAGGGACATGCCTTTAGGAAACTACACTCTTCACCTTGATGAAGGTGTGGCTGTTAAAATCTGCCTATATGATGAATCTGACCACTTACCGGTACATACCGAAGACAAAGTTTTTTACATTGAAGAAGATTACCGAGATTTTTTAGCTCGTCGAGGCTGGACATGCCTTCGGGAGTTTGATGGGTATAGAAACATCGATAATATGGATGACCTCCGTCCTGGTGCAATATACCGTGTATCGTCTCATCTGTACAGTGAGTATTGCATGTTTCCGAAGATGTCTATGAAATACATAAATGTAAAAAGTGATGCCATTGTCGCTACCACACAAGTTTACTTCAGTTTCTTAATTCCCGTTTATCATTTGGGTACATATCTTTGGAACCAACAGCTTATTAGCGGATCGTTATATTAG 1677 45.56 MKLEVRAADCDQDQVLPIPLRKQAISTEVGIIRKVTANWLSNLFVPFVTSLAWICLRLNSLPFAYLYVPLHFTNWYDDPGANYDVEAQAKVVGSSFLHTPHARSPKSHLSRNFTEFPESETMYLSDKPRPIDIYKEEGSRDMMIEVASNGDHHIQPHQPQPQPQQTHQQHQMMLGDSSGEDHEVKAPKKRAETWVQDETRSLIALRREMDGLFNTSKSNKHLWEQISAKMRERGFDRSPTMCTDKWRNLLKEFKKAKHHDRGSGSAKMSCYKEIEEILKERSKSTQYKSPTPPKIDSYMQFSDKGIEDNGLSFGPVEGGRPSLNLERQLDHDGHPLAITAADAVAATGIPPWNWREASGNGGESQAFGGRVISVKWGDYTRRIGVDGTSEAIKEAIKSAFRLRTKRAFWLEDEDQVVRSLDRDMPLGNYTLHLDEGVAVKICLYDESDHLPVHTEDKVFYIEEDYRDFLARRGWTCLREFDGYRNIDNMDDLRPGAIYRVSSHLYSEYCMFPKMSMKYINVKSDAIVATTQVYFSFLIPVYHLGTYLWNQQLISGSLY 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 28975397 28983678 - CePI673135_08g017900.1 Cec08g1790 210432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1790 558 FunFam trihelix transcription factor GT-1 194 256 - -
Cec08g1790 558 ProSiteProfiles Myb-like domain profile. 186 250 IPR001005 -
Cec08g1790 558 PANTHER FI21293P1 151 494 - -
Cec08g1790 558 MobiDBLite consensus disorder prediction 153 175 - -
Cec08g1790 558 Gene3D - 194 256 - -
Cec08g1790 558 SMART sant 190 252 IPR001005 -
Cec08g1790 558 MobiDBLite consensus disorder prediction 176 193 - -
Cec08g1790 558 Pfam Myb/SANT-like DNA-binding domain 193 277 IPR044822 -
Cec08g1790 558 CDD GT1 192 257 - -
Cec08g1790 558 MobiDBLite consensus disorder prediction 151 193 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1790 Cec-Chr8:28975397 Cec02g0077 Cec-Chr2:725182 1.00E-05 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30139 PF13837 Myb_DNA-bind_4 3.60E-20 CL0123 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1790 - - - 0.0