Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1809 ATGGCTTCCATATCACCTTACCGCCCAAACTTTGTGTTCTCTTCATTTCCGACCCGTGTTCCGAACTCAAACCCTCTATTTCATGGAGTTCAATTCCGAGGTTTATCCCACCATAAGCCTTTCCTTCGCGGTTCCCTTGCTGTGGCGAGATTTGGGTTTAAACCCGAGTTCTTGCCTGACCCGGATAACGCCGAGGGCTTTGTTAGAGAGTTGTTTGGCAAAGCTGAGAGCGTTCTTTACACGATTGCCGACGCCGCCGTGTCTGCTTCGCCGGAGAATGTTACCACCGCCAAGCAGACTGACGATTGGTTTACGGGGATTACCAATTATATGGAGAGCGTCCTTAAAATTCTTAAGGATGGACTTTCTACTCTACATGTTCCTTATGCCTATGGTTTTGCTATTATACTCCTTACAGTTCTTGTTAAGGCTGCTACGTTTCCTTTAACAAAGAAGCAGGTAGAATCTGCAATGGCGATGCGTTCTTTGCAACCACAAGTGAAGGCTGTTCAACAACGCTATGCTGGGGATCAGGAGAGGATTCAACTTGAGACTGCTAGACTGTACAAATTAGCTGGCATAAACCCATTGGCAGGATGCCTACCCACGTTGGCAACAATTCCTGTATGGATTGGGCTATACAGGGCTCTTTCAAATGTGGCCAACGAGGGTCTCCTCACAGAAGGTTTTTTCTGGATACCCTCTCTAGCTGGTCCAACTACGATTGCCTCTCGACAAAATGGGAGTGGTATTTCTTGGCTCTTTCCATTTGTTGATGGTCACCCACCACTTGGGTGGTCAGATACCTTTGCGTATCTTGTCTTGCCTGTGTTGCTGGTCGTTTCGCAGTACATCTCTGTTCAAATTATGCAATCATCGCAGACTAATGATCCAAGCATGAAGAGTTCTCAAGCGATAACGAAGTTCCTACCATTAATGATTGGATATTTTGCACTTTCAGTTCCTTCTGGTCTAAGTCTTTATTGGCTTACTAATAACATCTTGAGCACAGCTCAGCAAGCATGGCTTCAAAAGTTAGGTGGTGCCAAAACCCCCGACAAACAGTTCATTGATGAAATCATCAAACAAGAGCAAGAACAAGCCCGTGTCCAGAGCGAAGCGCCCAAGTTAAACTCAATCTCCAGTAGCACAGTAGCCCGACAAGAAGAGAAGCTGACAGCAGAAGGGCTAAAGCCTGGTGAAAGATTTAAACAGTTGAAGGAGCAAGAGGCTAGGTTAAGACAGCAAAGAGAAGAAGAAAAAAGGAAAGCTGAAAAGGTAGCCAAGGTTGAATCTCTGACAATAAATGACAGTGACAAGAGTGCAACCGTTGGAGTTGTTGTCAATGGCGGTCTTTCTAGGCAGGATGTAAAGGAGGATCGGAACTCCATTCCCACAACTTCTAGACAAAGAACTGATGTGGACAACAAGCCAAGTGCAACTCAAGGAGAGGGAGTACTCGAGACATACACCAGGGTGGCCAAGGATGCCAAACTAAACGGAGAAGAACAAAGAGAGTAA 1521 45.89 MASISPYRPNFVFSSFPTRVPNSNPLFHGVQFRGLSHHKPFLRGSLAVARFGFKPEFLPDPDNAEGFVRELFGKAESVLYTIADAAVSASPENVTTAKQTDDWFTGITNYMESVLKILKDGLSTLHVPYAYGFAIILLTVLVKAATFPLTKKQVESAMAMRSLQPQVKAVQQRYAGDQERIQLETARLYKLAGINPLAGCLPTLATIPVWIGLYRALSNVANEGLLTEGFFWIPSLAGPTTIASRQNGSGISWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISVQIMQSSQTNDPSMKSSQAITKFLPLMIGYFALSVPSGLSLYWLTNNILSTAQQAWLQKLGGAKTPDKQFIDEIIKQEQEQARVQSEAPKLNSISSSTVARQEEKLTAEGLKPGERFKQLKEQEARLRQQREEEKRKAEKVAKVESLTINDSDKSATVGVVVNGGLSRQDVKEDRNSIPTTSRQRTDVDNKPSATQGEGVLETYTRVAKDAKLNGEEQRE 506
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29091193 29095651 + CePI673135_08g018090.1 Cec08g1809 210451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1809 506 MobiDBLite consensus disorder prediction 450 506 - -
Cec08g1809 506 Pfam 60Kd inner membrane protein 131 345 IPR028055 -
Cec08g1809 506 CDD UDM1_RNF168_RNF169-like 361 429 - -
Cec08g1809 506 PANTHER OXA1 46 406 IPR001708 GO:0009535(PANTHER)|GO:0010027(PANTHER)|GO:0016020(InterPro)|GO:0032977(PANTHER)|GO:0032977(InterPro)|GO:0051205(PANTHER)|GO:0072598(PANTHER)
Cec08g1809 506 CDD 5TM_YidC_Alb3 132 345 IPR047196 -
Cec08g1809 506 Coils Coil 403 430 - -
Cec08g1809 506 MobiDBLite consensus disorder prediction 467 486 - -
Cec08g1809 506 NCBIfam membrane protein insertase YidC 131 345 IPR028055 -
Cec08g1809 506 MobiDBLite consensus disorder prediction 368 389 - -
Cec08g1809 506 MobiDBLite consensus disorder prediction 368 399 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g0162 Cec-Chr3:1604548 Cec08g1809 Cec-Chr8:29091193 3.40E-120 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1809 K03217 - csv:101205346 909.442