Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1823 ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGGGAGGCCCAAGCTGCTGCCGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAGGGAAGCTGTTAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTGTTGGAATTCACTATGGGGACCTTGACGGGTCCTGGCGCCGGCGGTAGACAAACGGAGAGCCAGGGCTTGACGCCGGAGGAGATGATTCGGCTTCCAACTGGTCCGAAAGACCGCTCTGGTGAGGAAGTGCGTCCTGGCCGCCTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGTCTGCTGGTCGATATCGAGACCGTGATGAAGGCGATGGGTCCTGGGGTAGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAACGCAGGGGTCCATCTCCTAGGGCTTCCAATTTCGATCAGCCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCGCATTGGATTCCGGTCGACAAAATAGGTACGGGTCGCTAGGCGGTGGCGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGTCAAAAAGCCTATTCCATCAAGATCCTCCACATTTGGTTCTGGTTATCGTGAGGCAAACGAGCCTGATCGCTGGGGTAGAGGTCGTTCACGTGATAGTGACACAGAACGACCTCGATTAGTACTGGATCCACCTAAAGGTAATGTCGTTACAAATGAAGCAACGAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTCGGGGATGCTAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTTCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTCATAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGATCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTCGAGGGATAGATGGTAA 1596 52.01 MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAVSTKPKKKKMSLLEFTMGTLTGPGAGGRQTESQGLTPEEMIRLPTGPKDRSGEEVRPGRLGGGFPTYDRHSMSAGRYRDRDEGDGSWGSGRRSYGGFDEERRGPSPRASNFDQPSRADEVDNWAMTKKSPALDSGRQNRYGSLGGGVGGIASRADEVDNWASVKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVIRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTADVWSRSTDDRKPIQGARDRGFLGNRDVERSRDRW 531
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29178134 29182371 + CePI673135_08g018230.1 Cec08g1823 210465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1823 531 MobiDBLite consensus disorder prediction 303 322 - -
Cec08g1823 531 MobiDBLite consensus disorder prediction 276 302 - -
Cec08g1823 531 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 436 IPR010433 GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER)
Cec08g1823 531 Pfam Plant specific eukaryotic initiation factor 4B 457 517 IPR010433 GO:0003743(InterPro)
Cec08g1823 531 Pfam Plant specific eukaryotic initiation factor 4B 1 459 IPR010433 GO:0003743(InterPro)
Cec08g1823 531 Coils Coil 403 430 - -
Cec08g1823 531 Coils Coil 15 37 - -
Cec08g1823 531 MobiDBLite consensus disorder prediction 227 248 - -
Cec08g1823 531 MobiDBLite consensus disorder prediction 117 132 - -
Cec08g1823 531 MobiDBLite consensus disorder prediction 439 531 - -
Cec08g1823 531 MobiDBLite consensus disorder prediction 1 344 - -
Cec08g1823 531 MobiDBLite consensus disorder prediction 483 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1222 Cec-Chr2:28567979 Cec08g1823 Cec-Chr8:29178134 5.80E-27 dispersed
Cec08g1823 Cec-Chr8:29178134 Cec02g0450 Cec-Chr2:4245441 2.80E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1823 K03258 - csv:101206526 916.761