Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec08g1823 | ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGGGAGGCCCAAGCTGCTGCCGCCGCCTCCCAAGCAGAATCGAAGAATTTCCCTAGCCTTAGGGAAGCTGTTAGCACCAAGCCCAAGAAGAAGAAGATGTCGCTGTTGGAATTCACTATGGGGACCTTGACGGGTCCTGGCGCCGGCGGTAGACAAACGGAGAGCCAGGGCTTGACGCCGGAGGAGATGATTCGGCTTCCAACTGGTCCGAAAGACCGCTCTGGTGAGGAAGTGCGTCCTGGCCGCCTTGGTGGGGGATTTCCCACTTATGATCGGCACAGTATGTCTGCTGGTCGATATCGAGACCGTGATGAAGGCGATGGGTCCTGGGGTAGTGGTCGACGATCGTATGGTGGGTTCGATGAGGAACGCAGGGGTCCATCTCCTAGGGCTTCCAATTTCGATCAGCCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCGCATTGGATTCCGGTCGACAAAATAGGTACGGGTCGCTAGGCGGTGGCGTGGGTGGAATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGTCAAAAAGCCTATTCCATCAAGATCCTCCACATTTGGTTCTGGTTATCGTGAGGCAAACGAGCCTGATCGCTGGGGTAGAGGTCGTTCACGTGATAGTGACACAGAACGACCTCGATTAGTACTGGATCCACCTAAAGGTAATGTCGTTACAAATGAAGCAACGAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCGAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGATTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGATTACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTCGGGGATGCTAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTTCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAGGAAAAGATGTTGAAAGAGGAAATTGATGTCATAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGATCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTCGAGGGATAGATGGTAA | 1596 | 52.01 | MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAVSTKPKKKKMSLLEFTMGTLTGPGAGGRQTESQGLTPEEMIRLPTGPKDRSGEEVRPGRLGGGFPTYDRHSMSAGRYRDRDEGDGSWGSGRRSYGGFDEERRGPSPRASNFDQPSRADEVDNWAMTKKSPALDSGRQNRYGSLGGGVGGIASRADEVDNWASVKKPIPSRSSTFGSGYREANEPDRWGRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGLQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVIRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTADVWSRSTDDRKPIQGARDRGFLGNRDVERSRDRW | 531 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 29178134 | 29182371 | + | CePI673135_08g018230.1 | Cec08g1823 | 210465 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec08g1823 | 531 | MobiDBLite | consensus disorder prediction | 303 | 322 | - | - | |
Cec08g1823 | 531 | MobiDBLite | consensus disorder prediction | 276 | 302 | - | - | |
Cec08g1823 | 531 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B | 1 | 436 | IPR010433 | GO:0003729(PANTHER)|GO:0003743(InterPro)|GO:0003743(PANTHER) | |
Cec08g1823 | 531 | Pfam | Plant specific eukaryotic initiation factor 4B | 457 | 517 | IPR010433 | GO:0003743(InterPro) | |
Cec08g1823 | 531 | Pfam | Plant specific eukaryotic initiation factor 4B | 1 | 459 | IPR010433 | GO:0003743(InterPro) | |
Cec08g1823 | 531 | Coils | Coil | 403 | 430 | - | - | |
Cec08g1823 | 531 | Coils | Coil | 15 | 37 | - | - | |
Cec08g1823 | 531 | MobiDBLite | consensus disorder prediction | 227 | 248 | - | - | |
Cec08g1823 | 531 | MobiDBLite | consensus disorder prediction | 117 | 132 | - | - | |
Cec08g1823 | 531 | MobiDBLite | consensus disorder prediction | 439 | 531 | - | - | |
Cec08g1823 | 531 | MobiDBLite | consensus disorder prediction | 1 | 344 | - | - | |
Cec08g1823 | 531 | MobiDBLite | consensus disorder prediction | 483 | 531 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1222 | Cec-Chr2:28567979 | Cec08g1823 | Cec-Chr8:29178134 | 5.80E-27 | dispersed | |
Cec08g1823 | Cec-Chr8:29178134 | Cec02g0450 | Cec-Chr2:4245441 | 2.80E-34 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec08g1823 | K03258 | - | csv:101206526 | 916.761 |