Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1840 ATGCCCAATGCCCAATGCCCAATGCCCAACATCAGCCATCCAATTAGCTTCAGAATCGGAATAAGGGAGGTGACGATGAGGACTGGATCACCACTTGGATTGTTCATTTTGATCACCGCTCTTCTCTTACTTCAATTATCCACAGTGGCAGACCCCAGATCCCGGACCGTCAAGATACTATGTTCAACCGTGCCAGAGCACAATACAACCGCCTTTGTGCCCAATTTCGTGGCCACAATGCAAATAATCAGCGACCAAATGCGAACCGGTGGGTTTGGAGTCGCAGTTGCGGGTAAAGGCCCGGACGCCAACTACGGCCTTGCTCAATGTTACGGAGATTTGTCGCTGATGGACTGTGTGTTGTGTTATGCGGAAGCCCGTACTGTCCTTCCTCAATGCTTCCCTTTCAACGGCGGCCGGATTTTCCTGGATGGCTGCTTCATGAGGGCTGAGAACTACAGCTTTTATGACGAATTTTCGGGGCCTCTTGACAGGGCTGTGTGCGGTAACAATTCCATCACCAACTCCCTTTTTGGACAGTCGGCCAGGCAGGCTGTGGCCCGAGCAACCCAAACTGCACCCAACAATGGAGGGTATGCCAGAATTCAAGTGGCTCCCTCTGGAACCCCCAATGCCTCCGTTTACCTGTTGGCTCAGTGCTGGAGGAATTTGAATCGCACCTCCTGCACTTCCTGTTTGCAAAACGCCTCTGCTTCTATCTTGAAATGCTTGCCTCGATCCGAAGCAAGAGCCCTCAACACAGGTTGCTTCATGAGATACTCTAACCTTGACTTCTTAAATGCCGAAGCTTCAGCTTCAAGGTCAAGGGGTACTATTATAGAAATTGTAGTCTCCCTGGTGAGTTCTGTTGCTGTTTTAGTCGTTGGAGTGTTGATTGGAATCTACATCTGGAATAACAGATATGTAAAGAAGAAGCGAAAAGGTTCAAACGATGCAAACAAGATGGCAAAAACACTAAACAATAGTAGCTTGAATTTCAAATACTCTACCCTTGAAAAGGCAACAGGATCCTTTGCTGAGGCTAACAAGCTTGGACAAGGAGGATTTGGCACTGTTTATAAGGCAATTCTGTCGGACGGAAGAGAGATAGCTGTGAAGAGGCTTTTCTTCAACAACAAACATAGAGCAGCAGACTTTTACAATGAAGTAAACATAATCAGTAGTGTGGAGCACAAAAACTTAGTACGGTTGCTTGGTTGTAGTTGTTCTGGACCTGAAAGTCTGCTCGTCTATGAATACCTTGCCAACAAGAGTCTCGACCGCTTCATTTTCGATCGAGATAGAGGTAAATTGCTCAATTGGGAGAAGAGATTTGATATCATTGTGGGAACAGTTGAAGGTTTGGCTTACCTTCATGAGAACTCAAAAACCAAGATCATACACAGAGACATCAAGGCTAGTAACATCCTGCTAGACTCCAAGCTTCGAGCTAAAATAGCTGATTTTGGATTAGCTAGATCCTTTGAAGAAGATGAGAGTCACATCAGCACGGCCATTGCTGGAACCTTGGGATACATGGCGCCAGAGTATTTAGCTCATGGGCAGCTAACAGAAAAGGCAGATGTGTACAGTTTTGGTGTGGTTTTGCTGGAGACCGTGACCGGCATACAAAACAGTAGAAGCAAAACCTCTGACTACTTGGAAAGCATAGTACTAATTGCATGGAAGCACTTTCAATCGGGGACAGTGGAAAGGATATTGGATCCGAACCTTATGGTTGAGGAAGATGGGAGCATAAAAGAGGAGATATTGAGAGTGGTGCAGATAGGGCTTCTTTGCACACAGGAGACTGCATCTCTACGACCCACAATGTCCAAGGTACTGCAGATGCTGATGAAGAAGGAAGAGGAACTTCCGGCGCCGACCAACCCACCGTTCATGGACGAGAGGACAATGGAATTAAACGACACCAGTGGCACTGAGGATCCATCATGCTTCAACCTCACGAAAGCTTCTTCCTCAGCGGCCACCGTGACCCATAGTTCATTTCATCCCAGAACCCCGGATTCCATGGCGATCCAGCTTGTTTATGCTTCCAAATATGTCCGATTTTCAATCATCACTATTCTTCTGCTGCTCGCAACTTCGACTCTGGGGAAGCCAAGAGATCAAACTGTGAGAGTCATCTGCGGGAAAGAACTGGAGCACAACACCACCGCCTACGTCCCAAACTTTTTTGGTTCCATGGAAAAAGTTAGACAACAAATCGGAACTTCAGGATTTGGAACCGCCGGTACAGGAATAGGACCTGATGCCAGCTATGGGCTTGCCCAATGCCATGGAGATCTCTCACCCCTTGAATGTGTGCTGTGTCATTCTCAAGCACGTACAATGCTCCCCCAATGCTTCCCTTTCAACGGCGGCCGAGCTTTCATTGATGGCTGCTTCCTGAGGTTCGAAAACTATACCTTTTTCGACGAATACAAAGGACCTGAAGACACTGCAGTTTGTGGGAACTTCACCCAAAATGACCCCAACTATAGACAAGCAGTCAAGGAGGCAGTGATGCAAGTGGTTAACGGTGCACCAGACAACAGAGGCTTTGCGAAAGCTCGAATGGCTGTGGCTGGGATGGCAAATGAGTCCGCCGCTTATGCTCTGGGTCAGTGCTGGAGAAGTTTGAACCGCAGCTCTTGCAGTTCATGTTTGTTAATTGCTTCTGCTTCAATGTTGCGATGTTTACCTCAATCTGAAGGACGAGCACTGAACACAGGCTGCTTCATGAGATATTCAAATACAGACTTCCTCAACAAGGACATCAAAAATAGTTCCAGAGGTGGCACAAGAACTGAATTGATAGTTTCAGTTTTGAGTTCTGTTGTTGTTTTGATAGTTGGCCTGGCGATTGGAGCTTATATCTGGAAGCGCAGACATATACAAAAGAAAAGGAAAGGAGGTTCAACTGATGTGAAGAAGTTTGCAAAAACTCTTCAAGATAGTAACTTGGAATTCAAGTACTCAACCCTTGAAAAAGCTACCAACAATTTCAGCCTTGATAACAAGATTGGACAGGGCGGGTTTGGCTCTGTTTATAAGGGAACTCTATCCGATGGAAGAGAAATTGCTGTGAAGAGATTCTTCTTTGATAACAGACATAGAGCAGCAGATTTCTACAATGAAGTGAACATGATCAGCAGTGTCGAACATAAAAATCTGGTAAGATTACTTGGATGCAGTTGTTCTGGACCTGAAAGCCTTCTTGTTTATGAATTCCTACCAAACAAGAGTCTCGATCGCTTCATTTTCGATACCAGTAGCAGTAAAGCTCTTGATTGGGATAAGAGATACAACATCATCACTGGAACGGTTGAAGGTTTAATATATCTACACGAAAATCCAAAGATCAAAATCATACACAGGGATATAAAGGCGAGTAATATCTTGCTGGATCTAAAGCTTCAAGCGAAAATAGCAGATTTTGGATTAGCAAGGTCTTTCCAAGACAGCAAGAGCCATATTAGCACGGCTGTTGCAGGAACCCTAGGATATATGGCTCCGGAGTATCTAGCTTATGGCCAGTTATCAGAAAAGGCCGATGTCTACAGCTTTGGAGTGCTTTTGTTAGAAATTGTTACAGGATTGCAATATAGTGGCATTCAAGTCTCCGGCAACATTGAAAGTCTGATCACTGCTATGTGGAGACATTTCCAAGCAGGCACAGTTGAGAGATTATTTGATCCAAATCTCAATCTTCAGAATCACTATAACAAGAAAGTGAAGGATGAGGTAAAGAGAGTGGTGCACATAGGGCTCTTATGCATCCAGGAGATTCCATCTCTACGACCAACAATGTTGAAGGTTCTACGAATGCTGACCATGGAGGAAGAGCATCTTCCTCCACCCACCAAACCACCCTTCATGGATGAGATGACCATGGAACTTGATGATTCATGCAAGTACTCACGATGTTATTCTAATACGGAGGGATCTTCTTCTACTGCCACAGTCGGCCATAGTTCTTTCCATCCCAGATAA 3996 45.37 MPNAQCPMPNISHPISFRIGIREVTMRTGSPLGLFILITALLLLQLSTVADPRSRTVKILCSTVPEHNTTAFVPNFVATMQIISDQMRTGGFGVAVAGKGPDANYGLAQCYGDLSLMDCVLCYAEARTVLPQCFPFNGGRIFLDGCFMRAENYSFYDEFSGPLDRAVCGNNSITNSLFGQSARQAVARATQTAPNNGGYARIQVAPSGTPNASVYLLAQCWRNLNRTSCTSCLQNASASILKCLPRSEARALNTGCFMRYSNLDFLNAEASASRSRGTIIEIVVSLVSSVAVLVVGVLIGIYIWNNRYVKKKRKGSNDANKMAKTLNNSSLNFKYSTLEKATGSFAEANKLGQGGFGTVYKAILSDGREIAVKRLFFNNKHRAADFYNEVNIISSVEHKNLVRLLGCSCSGPESLLVYEYLANKSLDRFIFDRDRGKLLNWEKRFDIIVGTVEGLAYLHENSKTKIIHRDIKASNILLDSKLRAKIADFGLARSFEEDESHISTAIAGTLGYMAPEYLAHGQLTEKADVYSFGVVLLETVTGIQNSRSKTSDYLESIVLIAWKHFQSGTVERILDPNLMVEEDGSIKEEILRVVQIGLLCTQETASLRPTMSKVLQMLMKKEEELPAPTNPPFMDERTMELNDTSGTEDPSCFNLTKASSSAATVTHSSFHPRTPDSMAIQLVYASKYVRFSIITILLLLATSTLGKPRDQTVRVICGKELEHNTTAYVPNFFGSMEKVRQQIGTSGFGTAGTGIGPDASYGLAQCHGDLSPLECVLCHSQARTMLPQCFPFNGGRAFIDGCFLRFENYTFFDEYKGPEDTAVCGNFTQNDPNYRQAVKEAVMQVVNGAPDNRGFAKARMAVAGMANESAAYALGQCWRSLNRSSCSSCLLIASASMLRCLPQSEGRALNTGCFMRYSNTDFLNKDIKNSSRGGTRTELIVSVLSSVVVLIVGLAIGAYIWKRRHIQKKRKGGSTDVKKFAKTLQDSNLEFKYSTLEKATNNFSLDNKIGQGGFGSVYKGTLSDGREIAVKRFFFDNRHRAADFYNEVNMISSVEHKNLVRLLGCSCSGPESLLVYEFLPNKSLDRFIFDTSSSKALDWDKRYNIITGTVEGLIYLHENPKIKIIHRDIKASNILLDLKLQAKIADFGLARSFQDSKSHISTAVAGTLGYMAPEYLAYGQLSEKADVYSFGVLLLEIVTGLQYSGIQVSGNIESLITAMWRHFQAGTVERLFDPNLNLQNHYNKKVKDEVKRVVHIGLLCIQEIPSLRPTMLKVLRMLTMEEEHLPPPTKPPFMDEMTMELDDSCKYSRCYSNTEGSSSTATVGHSSFHPR 1331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29279671 29286140 + CePI673135_08g018400.1 Cec08g1840 210482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1840 1331 SUPERFAMILY Protein kinase-like (PK-like) 987 1304 IPR011009 -
Cec08g1840 1331 ProSiteProfiles Gnk2-homologous domain profile. 815 922 IPR002902 -
Cec08g1840 1331 FunFam Cysteine-rich receptor-like protein kinase 2 421 626 - -
Cec08g1840 1331 CDD STKc_IRAK 351 620 - -
Cec08g1840 1331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g1840 1331 CDD STKc_IRAK 1009 1279 - -
Cec08g1840 1331 ProSiteProfiles Gnk2-homologous domain profile. 54 155 IPR002902 -
Cec08g1840 1331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1124 1136 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec08g1840 1331 FunFam Cysteine-rich receptor-like protein kinase 2 710 811 - -
Cec08g1840 1331 Gene3D Transferase(Phosphotransferase) domain 1 1079 1286 - -
Cec08g1840 1331 Gene3D Transferase(Phosphotransferase) domain 1 421 630 - -
Cec08g1840 1331 FunFam Putative DUF26-domain receptor-like protein kinase family protein 315 420 - -
Cec08g1840 1331 SUPERFAMILY Protein kinase-like (PK-like) 330 639 IPR011009 -
Cec08g1840 1331 ProSiteProfiles Protein kinase domain profile. 1003 1294 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1840 1331 Gene3D - 710 811 IPR038408 -
Cec08g1840 1331 Gene3D - 821 922 IPR038408 -
Cec08g1840 1331 Gene3D - 164 265 IPR038408 -
Cec08g1840 1331 Gene3D - 54 155 IPR038408 -
Cec08g1840 1331 FunFam Putative DUF26-domain receptor-like protein kinase family protein 973 1078 - -
Cec08g1840 1331 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524(InterPro)
Cec08g1840 1331 ProSitePatterns Protein kinases ATP-binding region signature. 1009 1031 IPR017441 GO:0005524(InterPro)
Cec08g1840 1331 SMART serkin_6 1003 1280 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1840 1331 SMART serkin_6 345 591 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1840 1331 ProSiteProfiles Gnk2-homologous domain profile. 710 811 IPR002902 -
Cec08g1840 1331 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 191 649 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cec08g1840 1331 FunFam Cysteine-rich receptor-like protein kinase 3 820 922 - -
Cec08g1840 1331 FunFam Cysteine-rich receptor-like protein kinase 3 164 265 - -
Cec08g1840 1331 FunFam Cysteine-rich receptor-like protein kinase 2 1079 1286 - -
Cec08g1840 1331 Pfam Protein kinase domain 347 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1840 1331 Pfam Protein kinase domain 1004 1276 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1840 1331 FunFam Cysteine-rich receptor-like protein kinase 2 54 155 - -
Cec08g1840 1331 Pfam Salt stress response/antifungal 824 919 IPR002902 -
Cec08g1840 1331 Pfam Salt stress response/antifungal 168 262 IPR002902 -
Cec08g1840 1331 Pfam Salt stress response/antifungal 68 153 IPR002902 -
Cec08g1840 1331 Pfam Salt stress response/antifungal 724 809 IPR002902 -
Cec08g1840 1331 ProSiteProfiles Protein kinase domain profile. 345 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec08g1840 1331 ProSiteProfiles Gnk2-homologous domain profile. 160 265 IPR002902 -
Cec08g1840 1331 Gene3D Phosphorylase Kinase; domain 1 963 1078 - -
Cec08g1840 1331 Gene3D Phosphorylase Kinase; domain 1 305 420 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1840 Cec-Chr8:29279671 Cec10g1412 Cec-Chr10:28462798 9.70E-132 dispersed
Cec05g2779 Cec-Chr5:38193199 Cec08g1840 Cec-Chr8:29279671 1.60E-132 wgd
Cec06g1916 Cec-Chr6:32528725 Cec08g1840 Cec-Chr8:29279671 1.40E-51 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72226 PF00069 Pkinase 1.60E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1840 - - - 0.0