Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1841 ATGGACTCCCGTGGTTTGCGCTGGGAAGCAGCTTTTGGGGCTCTCCCTGTCTCTCACCCACGCACTGTCTCTTCAGTCTTCCTGTTGGTTAGTGCTTGCCACTTTCTGTGGACAAATAGTCTGTTGTGGGTCTTTCAGCTTCATAATGTGTCTTACACGTGTGACCTGCCTGCTTCATACCTGTATCCTCCGATTCGGCATTTGGGTGTCCCAGATTCCCACTCGATCGTGGCCCGTTGGTTGTGCTCCCGAGCCCGTAGTTTAGTTCTCGCCTCCGTACTTGAACTTTTAATCTGGTGTATTGTAGATGAGGATGCTATGTCATCAGATGATGAGCTTAACTGGGGAGAGAGGGAATTACAAGATGCTCAAATGAGGTTTGAAGACAAAGGTCTTAAAGATATGCTCTTAAGTAGATTTGGCAGCCACATTGGTACCTTGAAGCTGGAATTTTCAAAGAAGAAGAAGAAAGGAAAACTACCTAAAGAAGGAAGGAAAGTACTGTTCGAGTGGTGGAATGTTCACTATAAATGGCCATATCCTACGGAAGCTGATAAGGTTGCGCTGGCAGAGACAACAGGACTAGATCCCAAGCAAATTAACAATTGGTTTATTAATCAACGAAAGCGGCACTGGAAACCTTCTGAAAGTATGCAATATGCAAATATGGATAATGTGGCTGATCAATTTTACGCTAGGCTTGACTCTTTTGGATTGGGTGGGAAGTGGAGTGCGGCGTGGTTAGGGCGAATGATGTTCATTTGCATGGGCATGGCTTCCTCGCTGCAACTCCAACTCCGTCTTCATCCTTCAACCACTCGACCTTTTCTGCGTCACCGCCCTATTCAATGCGCTTCCGACCGCCAGACACTATTCAACCGTATTGCGCCTGTCTACGATACCTTGAACGACTTGCTCAGCTTGGGTCAGCATCGCATTTGGAAACGGATGGCAGTCTCCTGGAGCGGTGCAAAGCCAGGAGACTGCGTCTTGGATATATGCTGTGGAAGCGGCGATTTGGCCTTCCTTTTATCTCACAAAGTTGGATCCCTCGGCAAGGTGATGGGTCTTGATTTCTCATGGGAGCAACTAAGAATTGCTTCTTCTCGCCAACGTTCCCTCTCCAACCCCTGCTATGACAACATTGAGTGGGTGGAGGGTGATGCACTCAATTTGCCATTTCCTGACGGCTCTTTCGATGCCATTACAATGGGCTACGGTCTACGAAATGTGGTGGATAAACGGAGAGCATTAGAGGAGATGCGTAGAGTACTAAAAGAAGGTAGTAAGGTATCAATTCTCGACTTTAACAAGACTACACAACCGACTACTGCTGCTATTCAGGAATGGATGATCAACAACATCGTTGTCCCAGTGGCATCTGGCTATGGCCTTGCCGAGGATTATAAATATCTGTCTAAATCCATCAAGGAATTTTCAACAGGAAAGGAATTGGAAGAACTTGCTTTAGCAGTAGGGTTCTCTACCTCTACACATTATGAAATTAGTGGAGGCCTTATGGGAAATTTGGTAGCATCTCGTTAA 1545 46.54 MDSRGLRWEAAFGALPVSHPRTVSSVFLLVSACHFLWTNSLLWVFQLHNVSYTCDLPASYLYPPIRHLGVPDSHSIVARWLCSRARSLVLASVLELLIWCIVDEDAMSSDDELNWGERELQDAQMRFEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLFEWWNVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKRHWKPSESMQYANMDNVADQFYARLDSFGLGGKWSAAWLGRMMFICMGMASSLQLQLRLHPSTTRPFLRHRPIQCASDRQTLFNRIAPVYDTLNDLLSLGQHRIWKRMAVSWSGAKPGDCVLDICCGSGDLAFLLSHKVGSLGKVMGLDFSWEQLRIASSRQRSLSNPCYDNIEWVEGDALNLPFPDGSFDAITMGYGLRNVVDKRRALEEMRRVLKEGSKVSILDFNKTTQPTTAAIQEWMINNIVVPVASGYGLAEDYKYLSKSIKEFSTGKELEELALAVGFSTSTHYEISGGLMGNLVASR 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29286810 29294702 - CePI673135_08g018410.1 Cec08g1841 210483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1841 514 Gene3D Vaccinia Virus protein VP39 294 514 IPR029063 -
Cec08g1841 514 NCBIfam ubiquinone/menaquinone biosynthesis methyltransferase 290 512 IPR004033 GO:0008168(InterPro)
Cec08g1841 514 Hamap 2-phytyl-1,4-naphtoquinone methyltransferase [menG]. 287 514 IPR032904 GO:0042372(InterPro)|GO:0052624(InterPro)
Cec08g1841 514 SUPERFAMILY Homeodomain-like 152 224 IPR009057 -
Cec08g1841 514 ProSiteProfiles 'Homeobox' domain profile. 151 214 IPR001356 GO:0003677(InterPro)
Cec08g1841 514 Pfam ELK domain 132 152 IPR005539 GO:0003677(InterPro)
Cec08g1841 514 SMART HOX_1 153 218 IPR001356 GO:0003677(InterPro)
Cec08g1841 514 Hamap Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 285 514 IPR004033 GO:0008168(InterPro)
Cec08g1841 514 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 119 224 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Cec08g1841 514 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 290 505 IPR029063 -
Cec08g1841 514 Pfam ubiE/COQ5 methyltransferase family 289 507 - -
Cec08g1841 514 SMART ELK_2 131 152 IPR005539 GO:0003677(InterPro)
Cec08g1841 514 ProSitePatterns ubiE/COQ5 methyltransferase family signature 1. 299 314 IPR023576 GO:0008168(InterPro)
Cec08g1841 514 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Cec08g1841 514 CDD AdoMet_MTases 330 433 - -
Cec08g1841 514 ProSiteProfiles UbiE family SAM-binding methyltransferase profile. 283 514 IPR004033 GO:0008168(InterPro)
Cec08g1841 514 Pfam Homeobox KN domain 171 210 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Cec08g1841 514 Gene3D - 150 227 - -
Cec08g1841 514 CDD homeodomain 165 215 IPR001356 GO:0003677(InterPro)
Cec08g1841 514 ProSitePatterns 'Homeobox' domain signature. 189 212 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1742 Cec-Chr8:28552386 Cec08g1841 Cec-Chr8:29286810 2.50E-33 dispersed
Cec05g2778 Cec-Chr5:38185860 Cec08g1841 Cec-Chr8:29286810 3.80E-50 wgd
Cec06g1905 Cec-Chr6:32410348 Cec08g1841 Cec-Chr8:29286810 2.10E-25 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30142 PF01209 Ubie_methyltran 4.30E-55 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1841 K23095 - csv:101208642 440.654