Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec08g1842 ATGCGCTCCACTTCTCAATTCCCTCCCAAGTCCTTCCTTTCATCTGACAATCCCATCCTTCCCCTCCATTACCACACCTTGCTTTCCTCCACCAACTTCCGCGATCGGATTCCTGTCTTCGGATCCCATGACTTGGTTTCCACTAATTCCGCCATATCCCAACCCCAACCACCTTCCACTACTCCAGATTTCCCACTCCCAGAAGATGCTCTCACCCTCACCAAGGCCAAAATTCTCTCTCATCCTACCTATCCTCGTTTGCTTCAAGCTTATATTGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCTTGCTTGTTGGAGGAAATCCGGCGGGAAAACGACAGTCACAAACAAAACGCCATCTCCACGTGCTTTGGAGCCGATCCCGAGCTCGATGAGTTCATGGAAGCGTACTGTGACATGCTGGTGAAGTATAAATCAGATCTCTCGAGGCCCTTTCATGAAGCTTCTTCCTTCTTGAACAGCATTCAACTGCAACTTAGCGACCTCTGCGCTGGTGCTTCCACCAGAACCCCTTCCAAAGGAAAAAACAAAAAAATACAACTCGGAAGAATAATAATACGGTTTCGTGGGGTTAATAAAGCACGAACAAACAGCGAACCCTAG 630 48.73 MRSTSQFPPKSFLSSDNPILPLHYHTLLSSTNFRDRIPVFGSHDLVSTNSAISQPQPPSTTPDFPLPEDALTLTKAKILSHPTYPRLLQAYIDCQKVGAPPEIACLLEEIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNSIQLQLSDLCAGASTRTPSKGKNKKIQLGRIIIRFRGVNKARTNSEP 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 29301026 29302458 - CePI673135_08g018420.1 Cec08g1842 210484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec08g1842 209 SMART KNOX2_2 122 173 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cec08g1842 209 PANTHER FUSED COMPOUND LEAF 1 68 181 - -
Cec08g1842 209 Pfam KNOX2 domain 126 172 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Cec08g1842 209 Pfam KNOX1 domain 75 115 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Cec08g1842 209 SMART KNOX1_2 72 116 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1842 Cec-Chr8:29301026 Cec05g2778 Cec-Chr5:38185860 3.90E-56 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec08g1842 - - - 0.0