Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0022 ATGGGGAAAGCTACCAGATGGTTGAAGGGTTTATTGGGGATCAAGAAAGAAAAAGACCCATCTGGGAATTCAAATTCAAATTCAAATTCAACCACCCTCGCCGCCGACAGAAAGGACAAGAAACGCTGGAGTTTTGCAAAGTCCGCTAGAGATTCCGGCCAAACGCCGCCTCCACCGCCGGACACTACTTGGTTCAGATCCTCCTACATTTCTGATTCAGAGAAAGAGCAGAACAAACACGCAATTGCTGTAGCTGCAGCCACCGCCGCCGCCGCAGACGCCGCCGTCGCGGCAGCGCAAGCGGCGGTGGCCGTCGTCCGCCTGACTAGCCAAGGAAGAGGGTCTCTTTATATCACTGGAAGAGATAGATGGGCTGCTGTGAAGATTCAAACAGTTTTTAGGGGCTATTTGGCAAGAAAGGCCCTGCGAGCTCTCAAAGGGCTTGTTAAATTGCAGGCTGTGGTTAGAGGATTTCTTGTGAGGAAAAGAGCTGCTGCTACTCTTCACAGTATGCAAGCTCTTTTTCGAGCTCAAACTGCAGTTAGAACTCAGAGAGCTCGTCGATCTTTCAACAAAGAGAACAGGTTTATCCCCGAGATTCGTCCCCGAAAATCTTCGGAACGCTTTGATGAAACAAGAAGTGAATTATTCCATAGTAAGAGGTTGTCTGTAGCATCATCTTATGACACAACCTGTATGAATTCATTGGATGAGAGTCCCAAAATCGTGGAAATCGACACCTACCGAACTCGATCGAGGTCTCGTAGGTACATTTCGACATTGTCCGAATGCGGAGGAGATGATGTAGCTTTCCAAGCAATCTCTTCATCGCCATTACCTTGTCCGAATCGACCTCGCGTCGTTGTGGATTGCCACAACAATGTGCTTCAAGACTTCGAATGGTGCTTGATGGGTGAGGACTGCAAGTTCCCTACAGCTCACAGCACGCCCCGGCTATCGAATAACTCGTTCGTCTCTGCCAACGTGCCAGTCACCCCATCCAAGAGCGTGTGCGGGGACAGCTTCTTTAGGCCATACATGAACTACTGCCCCAATTATATGGCGAACACACAATCTTTCAAGGCAAAACTGAGGTCTCAAAGTGCCCCAAAGCAAAGGCCAGAGCCAGGGTCCAAGAAGAAGCTATCGTTGAATGAAATAATGGCAGCAAGAAACAGCTTGAGCAGTGTAAGAATGCGAAGACCAAATAACCAAATGCTGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATGATGATGATGAAGAAGAAGAAGAAGCATCATATGGTTTTTGA 1317 47.76 MGKATRWLKGLLGIKKEKDPSGNSNSNSNSTTLAADRKDKKRWSFAKSARDSGQTPPPPPDTTWFRSSYISDSEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSQGRGSLYITGRDRWAAVKIQTVFRGYLARKALRALKGLVKLQAVVRGFLVRKRAAATLHSMQALFRAQTAVRTQRARRSFNKENRFIPEIRPRKSSERFDETRSELFHSKRLSVASSYDTTCMNSLDESPKIVEIDTYRTRSRSRRYISTLSECGGDDVAFQAISSSPLPCPNRPRVVVDCHNNVLQDFEWCLMGEDCKFPTAHSTPRLSNNSFVSANVPVTPSKSVCGDSFFRPYMNYCPNYMANTQSFKAKLRSQSAPKQRPEPGSKKKLSLNEIMAARNSLSSVRMRRPNNQMLQEEEEEEEEEEEEEEEEDDDDEEEEEASYGF 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 231277 233086 + CePI673135_09g000220.1 Cec09g0022 210532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0022 438 MobiDBLite consensus disorder prediction 362 438 - -
Cec09g0022 438 PANTHER IQ-DOMAIN 5-RELATED 6 385 - -
Cec09g0022 438 MobiDBLite consensus disorder prediction 1 63 - -
Cec09g0022 438 Pfam Protein of unknown function (DUF4005) 314 400 IPR025064 -
Cec09g0022 438 MobiDBLite consensus disorder prediction 19 33 - -
Cec09g0022 438 ProSiteProfiles IQ motif profile. 122 150 - -
Cec09g0022 438 Pfam IQ calmodulin-binding motif 123 143 IPR000048 GO:0005515(InterPro)
Cec09g0022 438 Pfam IQ calmodulin-binding motif 149 163 IPR000048 GO:0005515(InterPro)
Cec09g0022 438 Gene3D - 75 148 - -
Cec09g0022 438 ProSiteProfiles IQ motif profile. 146 173 - -
Cec09g0022 438 Coils Coil 403 433 - -
Cec09g0022 438 MobiDBLite consensus disorder prediction 388 403 - -
Cec09g0022 438 SMART iq_5 144 165 IPR000048 GO:0005515(InterPro)
Cec09g0022 438 SMART iq_5 121 143 IPR000048 GO:0005515(InterPro)
Cec09g0022 438 MobiDBLite consensus disorder prediction 408 438 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec03g1666 Cec-Chr3:34853316 Cec09g0022 Cec-Chr9:231277 4.10E-84 dispersed
Cec09g0022 Cec-Chr9:231277 Cec09g2145 Cec-Chr9:38401423 6.90E-10 dispersed
Cec07g1451 Cec-Chr7:30162977 Cec09g0022 Cec-Chr9:231277 2.40E-43 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0022 - - - 0.0