Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0023 | ATGGCATTTAGAGGGCGAGGACGAGGACGAGGTGGCGGCGGTGGGGCCTTTCAGTATGCCAAGCAAGAACCCTTTGAGCTTTTTCCAGAGAATGTAACTCTACCGAGCGTCAGTGATATGCCTGAAGAAAGAAGCTTGGCTTTACGTAACAACAAGTTTCTGAATTATTGGAAGGCCTCTCCTTTTTATCTAGAGGAAAATGTTATGAAAAAGGTGCAAAGAACTGAGATAGAGAAATTTTCCGATAGATCCAAGTCGAATAGTACGTTGAAGCGTGATTCCCTTGCACAAATTCTACAGCTCACATCCAGGAACTTTCCTGAAGAATTGGTTGAAGATACTCTACTGTTAAATTTTCAGGTTTCAAAGGGAAGTTGCGGACCAAAAGAAAAGTGCAATGGAATCCTGGCTCAGGGACAGGATAAGGATGATAAGGAGAAGAAAGAAGGAGAAGAAGGTGAAGATGAAGATGAAGATGAAGACGATGCACAGTCCGAGGAACTTACTGATGATGATTATTATCAGAATGAATACTTCGACGACGATGAAGATGATTACAACATGGAAGAAGAAGGTGGAGGTATGGTTTTTTACTCTGATGTACTGATTAATATTATGAACCAGAATATTAGCAGAATGGAACGTGGTGGTAAGATTTGGGGCTTGTTTCTCCAACTCAAAGAATTTAATTGGTGTAGGGCATTGGATTGTTTGGGCAAAATGTCGTGGCAAACGTACGTGGACGATCACCTGATGTGTGAGATTGAAGGAAACCATCTGACCTCCGCCGCAATCATCGGACACGACGGCAGTGTTTGGGCGCAGAGCTCCTCATTCCCTCAGTTTAAGGCGGAGGAGATATCGGCGATTATGAAGGATTTGGATGAGCCAGGTTCTCTTGCACCAACTGGATTACACCTGGGAGGCACTAAATACATGGTCATCCAAGGAGAGCCTGGATCCGTTGTTCGTGGCAAAAAGGGTGCTGGGGGAATCACTGTGAAGAAAACTGAGAAGGCTGTCATAATTGGGATTTATGATGAACCTTTGACTCCTGGACAATGCAATATGGTGGTTGAAAGGTTGGGAGATTACCTCATCGAACAGGCTTTGTAG | 1116 | 44.09 | MAFRGRGRGRGGGGGAFQYAKQEPFELFPENVTLPSVSDMPEERSLALRNNKFLNYWKASPFYLEENVMKKVQRTEIEKFSDRSKSNSTLKRDSLAQILQLTSRNFPEELVEDTLLLNFQVSKGSCGPKEKCNGILAQGQDKDDKEKKEGEEGEDEDEDEDDAQSEELTDDDYYQNEYFDDDEDDYNMEEEGGGMVFYSDVLINIMNQNISRMERGGKIWGLFLQLKEFNWCRALDCLGKMSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVERLGDYLIEQAL | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 237917 | 244169 | - | CePI673135_09g000230.1 | Cec09g0023 | 210533 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0023 | 371 | SMART | prof_2 | 241 | 371 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | Gene3D | Dynein light chain 2a, cytoplasmic | 239 | 370 | - | - | |
Cec09g0023 | 371 | PRINTS | Profilin signature | 243 | 252 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Profilin signature | 353 | 370 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Profilin signature | 304 | 318 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Profilin signature | 340 | 353 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Profilin signature | 261 | 270 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Profilin signature | 280 | 300 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | SUPERFAMILY | Profilin (actin-binding protein) | 242 | 369 | IPR036140 | - | |
Cec09g0023 | 371 | CDD | PROF | 242 | 369 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | MobiDBLite | consensus disorder prediction | 130 | 171 | - | - | |
Cec09g0023 | 371 | MobiDBLite | consensus disorder prediction | 150 | 171 | - | - | |
Cec09g0023 | 371 | PANTHER | DNA-DIRECTED RNA POLYMERASE III | 1 | 193 | IPR024661 | GO:0005666(PANTHER)|GO:0006383(InterPro) | |
Cec09g0023 | 371 | PRINTS | Plant profilin signature | 357 | 370 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Plant profilin signature | 292 | 306 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Plant profilin signature | 344 | 357 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Plant profilin signature | 324 | 339 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Plant profilin signature | 267 | 280 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Plant profilin signature | 241 | 254 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | PRINTS | Plant profilin signature | 311 | 320 | IPR005455 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | Pfam | Profilin | 241 | 369 | IPR048278 | GO:0003779(InterPro) | |
Cec09g0023 | 371 | FunFam | Profilin | 241 | 371 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec09g0023 | Cec-Chr9:237917 | Cec11g0212 | Cec-Chr11:2303911 | 2.50E-61 | dispersed | |
Cec11g1559 | Cec-Chr11:29869735 | Cec09g0023 | Cec-Chr9:237917 | 2.10E-54 | wgd | |
Cec07g1455 | Cec-Chr7:30183925 | Cec09g0023 | Cec-Chr9:237917 | 3.00E-57 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0023 | K05759 | - | cit:102614190 | 243.817 |