Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0030 ATGGGTACAACAACGAACGAAACATACAGGTTTCCTGGTGATATATATGATCGATTTTGGACGCCTTTCAATTGGTACGAGTGGACAAGCATAAGTACCACACTTAAGATAGATTCAGCTGATAATAATTACTACCAGCCAGGATCTGCTGTCATGGGAACTGCAGCTATTAGAATAGATACAAAAAAGCCTATGGAAATTTGGTGGGAGCCTGAAGATGAAAACACCCAGTATTATGTATACATGCACTTTGCTGAAGTTGAAAATCTCCAAGCCAATCAATCCAGAGGATTCAACGTCACTTATAATGGGACTTTTTGGTATGGTCCTCTCATTCCCAACTACTTGTCAACAATAACGCTCTACAATCGAGGGCCATTACCAACACCAAATAAAAAGCATCTGTTCTCATTTATACAAATTGAAAATTCAACACGCCCTCCAATTATAGATCTATCAGAGCTAACGTCAGATCAAGGAGATGTGGATGCAATAACAAGCATCAAGTCAACTTACGGAATAGTCAGAGATTGGGAAGGAGATCCATGTGTTCCAAGAGCATACCCTTGGGAGGGTATAGATTGTACCAAAACAAATGGAACTGCTCCTAGAATCGTGTCTTTGAATTTGTCATCAAGTGGATTGACAGGAGAGATTTCTCAAAGTATAGAGAATCTACAAATGATACAAATATTGGACTTGTCAAACAATGGCTTGACGGGAACTATCCCCGATTTTCTGTCTAACTTGTCAAACCTTGAAGTCTTAAAGTTAGACAACAACAAGCTTTCAGGCTCTATTCCATCTGAACTCATTACGAGACTCAATAATGGTTCATTAACGTTAAGTGTTCAAGGGAATCCAAATCTAGATTGCATATCAAATTTGTGCAAGAGTCAAGGTTATCAACAGTTTCAAGCAGAGGTTACACTTCTTTTGAGAGTTCACCACAAAAACTTGACAAGTCTTGTGGGGTATTTGAATGAAGGAGACCGCCTTGGGCTCATTTATGAGTTCATGGCCAAAGGAAACTTAGCAGAGCATCTTTCAGAAACGAGTTCCTATGTCTTAAGTTGGCAAGATAGGCTCCGGATAGCCATGGATGCAGCACAAGGATTGGAGTACCTACACGATGGTTGCAAGCCACCCATAATCCATAGAGATGTGAAAACAACAAACATCTTATTGACAGAGAATTTCCAAGCCAAACTTGCAGATTTTGGTTTATCCAAAAGCTTCCCAGTAGATGGCAACAAAACTAACAACTACATGTCCACCATTGTTGCTGGAACCCCTGGTTACCTTGATCCAGACTACTACTTATCGAACAGGCTAACGGAGAAAAGCGATGTGTACAGCTTTGGAGTGGTTCTGTTGGAGATAATCAGCTGCAGACCTGTGATATCAAGAAGCGAAGAAAATGGTCATATCAGTAAATGGGTAAACTCGATGGTGGCTCAAGGGGACATAAATAGAATAGTTGATGAAAGATTGAGAGGAAAATATGATGGTAACTCAGTTTGGAAGGCAGTGGAGGTGGCGTTGAGTTGTGTATCTGGGAACTCTGGAAGAAGACCGACGATGAACCACGTGGTGGCGGAACTGAAGAGTTGTCTGGCCATGGAATTGGAACGGACGCCGGAGAGTCAAGGTTTCGATTCGACGAATTCCGTTAACATGATGTCCATTGTTATGGATTACAGTGAATCCGCTCCAATGGCGAGGATTGGAGTACCTGCACGATGGTTGCAAACCGCCCATAATCCACAGAGATGTGAAAACAACAATGCAGATTTTGGTTTATCCAAAAGCTTTCAAACAGAAGGCAACGACACCCATATGTCCACCATTGTTGCTGGCACTATTGGTTACCTTGATCCAGAGTACTATAAATCAAACAGGTTGACTGAGAAAAGTGATGTGTATAGCTTTGGGGTTGCTCTGTTGGAGATAATCAGCTGCAAACCTGTAAGACCACTAACTGACACGGATATTCATATCATCAAATGGGTAAACTCCCTGCCTGTTCGAGGGGATATTAACGGCATAATTGACCGAAGATTGAATGGAAATTATGATGTGAACTCAGTTTGGAAGGCAGTGGAAATAGCGATGAATTGGGTATCCAAGAAGCCTACAAGAAGACCGACAATGAACCAAGTGGTGGCAGAACTAAAGAATTGCTTAGCAATGGAATTGGAACGGATGCCGGAGAACGAAGCTTCCAATTCCATGTCCATTGTTATGGATTACAGTGTATCCCGTCCAATGGCAAGGGACTTGTCAAACAATAATTTGACAGGGCAAGTGCCTGATTTCCTGTCTAGTTTGTCAGACCTCAAAACTCTGAACCTAGGCAACAACAAGCTCTCAGGTCCAATTCCGGCTGAGCTTTTGAAAAGATCCAATGATGGCTCACTATCATTAAGTGTGGGAGGTAACCAAAATCTCGATGGATGTACATCAGATCCATGTCCAAAGAATGAGAAGAAGAAGAACAACATCATCATTCCAATTGTAGCATCAATTGGTGGATTCCTAGTTGTCATTACAATTGCTGCAGTAACCTTTTGGATCATCAAATCTCGAAAGAAACAAGAAGGTAAAAATGTTGTCTCAGTGGTGGATAAGTCAGAAACTAACAGTCAATTTGGTAATTCATTGGAGGTGAGAAGGCGTCAATTTACATATTCTGAGGTGGTGAAAATGACAAACAATTTCAGTAAAGTTTTGGGTAAAGGAGGTTTCGGGAAGGTCTATTATGGTGTCATTGACGAAATTCAAGTGGCAGTGAAGATGTTGTCTTTATCATCACCACAAGGATATCGGCAATTTCAAGCAGAGGTTACCCATCTTATGAGAGTTCACCACAGAAACTTGACCAGCCTCGTTGGATATTTGAATGAAGGAGATCGCCTTGGCCTAATTTACGAGTACATGGCCAATGGAGATTTGGCCAAACACCTTTCAGAGAGGAGTGTACATATCCTAAGCTGGGAAAACAGACTTCGAATAGCAATGGATGCAGCTCAAGGATTGGAGTACTTGCATTATGGTTGTAAGCCACCCATAGTTCACAGAGATGTGAAAACAACAAACATCTTATTGACAGATAATTTCCAAGGCAAACTTGCAGATTTTGGTCTTTCCAAAAGCTTCCCCAGAGATGGCAACACCCACATGTCCACGGTTGTTGCTGGCACTCCTGGTTACCTTGATCCAGAGTACTACGTATCAAACAGGCTAACAGAGAAAAGCGATGTATACAGCTTTGGGATAGCTCTATTGGAGATAATCAGTTGCAAACCAGTAATATCAAGAACCGGAGATACACCACATATAGCTAAATGGGTTACCTCTTTGCTGGCGCGAGGAGATATCCAGAGTATAGTTGATCCAAGATTAGAAGGGCAATATGAAACAAACTCTGTTTGGAAGGCGGTGGAAGTGGCAATGGCTTGTGTAGCGGCAAATTCCAGTAGAAGGCCGACGATGAGCGACATTGTGGCGGAACTTAAAGATTGTTTAGCTACGGAATTGAGCCGAAAGCTTGAGAATCGTTCGCTTGATTCGACAAATTCCATTGAAATGAGGTCCATCTCTGTAGGATTTAATGCTTCCGATTCAAATCCCATGGCGAGGTGA 3645 41.92 MGTTTNETYRFPGDIYDRFWTPFNWYEWTSISTTLKIDSADNNYYQPGSAVMGTAAIRIDTKKPMEIWWEPEDENTQYYVYMHFAEVENLQANQSRGFNVTYNGTFWYGPLIPNYLSTITLYNRGPLPTPNKKHLFSFIQIENSTRPPIIDLSELTSDQGDVDAITSIKSTYGIVRDWEGDPCVPRAYPWEGIDCTKTNGTAPRIVSLNLSSSGLTGEISQSIENLQMIQILDLSNNGLTGTIPDFLSNLSNLEVLKLDNNKLSGSIPSELITRLNNGSLTLSVQGNPNLDCISNLCKSQGYQQFQAEVTLLLRVHHKNLTSLVGYLNEGDRLGLIYEFMAKGNLAEHLSETSSYVLSWQDRLRIAMDAAQGLEYLHDGCKPPIIHRDVKTTNILLTENFQAKLADFGLSKSFPVDGNKTNNYMSTIVAGTPGYLDPDYYLSNRLTEKSDVYSFGVVLLEIISCRPVISRSEENGHISKWVNSMVAQGDINRIVDERLRGKYDGNSVWKAVEVALSCVSGNSGRRPTMNHVVAELKSCLAMELERTPESQGFDSTNSVNMMSIVMDYSESAPMARIGVPARWLQTAHNPQRCENNNADFGLSKSFQTEGNDTHMSTIVAGTIGYLDPEYYKSNRLTEKSDVYSFGVALLEIISCKPVRPLTDTDIHIIKWVNSLPVRGDINGIIDRRLNGNYDVNSVWKAVEIAMNWVSKKPTRRPTMNQVVAELKNCLAMELERMPENEASNSMSIVMDYSVSRPMARDLSNNNLTGQVPDFLSSLSDLKTLNLGNNKLSGPIPAELLKRSNDGSLSLSVGGNQNLDGCTSDPCPKNEKKKNNIIIPIVASIGGFLVVITIAAVTFWIIKSRKKQEGKNVVSVVDKSETNSQFGNSLEVRRRQFTYSEVVKMTNNFSKVLGKGGFGKVYYGVIDEIQVAVKMLSLSSPQGYRQFQAEVTHLMRVHHRNLTSLVGYLNEGDRLGLIYEYMANGDLAKHLSERSVHILSWENRLRIAMDAAQGLEYLHYGCKPPIVHRDVKTTNILLTDNFQGKLADFGLSKSFPRDGNTHMSTVVAGTPGYLDPEYYVSNRLTEKSDVYSFGIALLEIISCKPVISRTGDTPHIAKWVTSLLARGDIQSIVDPRLEGQYETNSVWKAVEVAMACVAANSSRRPTMSDIVAELKDCLATELSRKLENRSLDSTNSIEMRSISVGFNASDSNPMAR 1214
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 300061 314951 + CePI673135_09g000300.1 Cec09g0030 210540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0030 1214 Gene3D Ribonuclease Inhibitor 753 843 IPR032675 -
Cec09g0030 1214 SUPERFAMILY Protein kinase-like (PK-like) 884 1172 IPR011009 -
Cec09g0030 1214 SUPERFAMILY Protein kinase-like (PK-like) 597 751 IPR011009 -
Cec09g0030 1214 Gene3D Ribonuclease Inhibitor 162 291 IPR032675 -
Cec09g0030 1214 CDD STKc_IRAK 911 1173 - -
Cec09g0030 1214 Pfam Malectin-like domain 2 150 IPR024788 -
Cec09g0030 1214 SUPERFAMILY L domain-like 201 812 - -
Cec09g0030 1214 FunFam Leucine-rich repeat receptor-like protein kinase 878 979 - -
Cec09g0030 1214 ProSiteProfiles Protein kinase domain profile. 269 539 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0030 1214 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 980 1185 - -
Cec09g0030 1214 Gene3D Transferase(Phosphotransferase) domain 1 591 752 - -
Cec09g0030 1214 Gene3D Transferase(Phosphotransferase) domain 1 341 559 - -
Cec09g0030 1214 Gene3D Transferase(Phosphotransferase) domain 1 980 1197 - -
Cec09g0030 1214 SUPERFAMILY Protein kinase-like (PK-like) 300 557 IPR011009 -
Cec09g0030 1214 SMART serkin_6 266 509 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0030 1214 SMART serkin_6 905 1176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0030 1214 Pfam Protein tyrosine and serine/threonine kinase 907 1172 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0030 1214 Pfam Protein tyrosine and serine/threonine kinase 297 535 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0030 1214 PANTHER OS07G0107800 PROTEIN-RELATED 760 1181 - -
Cec09g0030 1214 FunFam Leucine-rich repeat receptor-like kinase 161 293 - -
Cec09g0030 1214 Pfam Protein kinase domain 597 723 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0030 1214 ProSiteProfiles Protein kinase domain profile. 905 1176 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0030 1214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1024 1036 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0030 1214 Gene3D Phosphorylase Kinase; domain 1 292 340 - -
Cec09g0030 1214 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 340 547 - -
Cec09g0030 1214 Pfam Leucine Rich Repeat 252 271 IPR001611 GO:0005515(InterPro)
Cec09g0030 1214 Pfam Leucine Rich Repeat 780 798 IPR001611 GO:0005515(InterPro)
Cec09g0030 1214 Pfam Leucine Rich Repeat 229 250 IPR001611 GO:0005515(InterPro)
Cec09g0030 1214 ProSitePatterns Protein kinases ATP-binding region signature. 911 932 IPR017441 GO:0005524(InterPro)
Cec09g0030 1214 Gene3D Phosphorylase Kinase; domain 1 892 979 - -
Cec09g0030 1214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g1466 Cec-Chr7:30254374 Cec09g0030 Cec-Chr9:300061 2.00E-89 dispersed
Cec09g0027 Cec-Chr9:270974 Cec09g0030 Cec-Chr9:300061 2.70E-91 dispersed
Cec09g0030 Cec-Chr9:300061 Cec11g1723 Cec-Chr11:31497152 5.40E-81 dispersed
Cec09g0033 Cec-Chr9:329545 Cec09g0030 Cec-Chr9:300061 3.00E-24 dispersed
Cec09g0034 Cec-Chr9:335235 Cec09g0030 Cec-Chr9:300061 3.50E-38 dispersed
Cec09g0030 Cec-Chr9:300061 Cec09g0031 Cec-Chr9:317210 5.30E-68 tandem
Cec02g0625 Cec-Chr2:6248136 Cec09g0030 Cec-Chr9:300061 2.30E-12 transposed
Cec05g2853 Cec-Chr5:38745232 Cec09g0030 Cec-Chr9:300061 1.90E-78 transposed
Cec07g1464 Cec-Chr7:30239146 Cec09g0030 Cec-Chr9:300061 3.50E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72232 PF07714 PK_Tyr_Ser-Thr 8.40E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0030 - - - 0.0