Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0031 ATGGAAACAGCAATAGCAACGTGGGTCTTGTTGAGTTCTTTTGCACTCCTTGTTGAAGCTCAAGATCAACCAGGCTTTGTTAGTCTAGATTGTGGTCTACAAGCAAATTCATCAGGCTACATCGATCCAAAGACAAATATTAAGTATATATCAGATGCAAGCTTTATAAACACAGGGGAAAGTAGAAGCGTAGCACCTGAGTTCAAGAACTATGAACAATCACACTGGACTCTAAGAAGTTTTCCTCAAGAAATTAGAAACTGTTACAATAAAAGCGCCATTAAAGACACCACGTATTTGATTCGAGCAAGCTTCTTATACGGAAATTATGATGGGCTCAATAAAACTCCACGCTCTGATCCAGTCCCTAGAATCACATCACTGAACTTGTCTTCAAGCGAATTGAAGGGTGAGATATCTCCGCACATAATCAGTCTACCAATGTTACAAACATTGGATTTGTCAAACAATTACTTGACAGGAGAAGTACCTAGATTTCTGTCCCAGTCGGAACACCTCAAAATCCTAAACTTAGAGAATAACAATCTCACAGGCTCTCTTCCACCAGAGCTTATCAAAAAACAGAAGAACCGGCTGGAGTATCTGCATCATGGTTGTAAGCCACCAATAGTCCACAGGGATGTGAAAACAACAAACATCTTATTGACAGAAAAATTCAACGCCAAACTTTCTGATTTTGGTCTTTCCAAGACTTATCCAACAGATGACAAGTCCTACATGAGCACTGTTATTGTTGGCACTCCCGGTTACCTTGATCCAGAGTACTTTACATCAAACAGGCTAACTGAAAAAAGCGATGTGTATGGTTTTGGAGTTTCCTTGATGGAAGTAATTAGTTGCAGACCAGTAATTTCAAACATCCAAGACCCGGAAACGAATTACATAGCCAAATGGCTTCGTACCATGGTTGCTCAGGGAGATATCAAGAACATAGTCGACCCAAGGTTAAAAGAAGCATATGAATGTAACTCTGTTTGGAAAGCTGTAAAAGTAGCATTGGCTTGCGTATCAGAAAACTCCAGTCAAAGGCCAACGATGAATCAAGTGGTGATAGAGCTGAAGGATTGCTTGGGCATGGAGTTGAATCAGAGATCTAAAATTGCAGACTACAAGTCAAACAAGCCCCTGCTAAGGAAATCTGTTGATGACAGTGTGGAAGGTAATTCAAATCTGGACTGCACAAATGAGGAAGTGGTGGTGAAGGAGGAGTAG 1233 40.63 METAIATWVLLSSFALLVEAQDQPGFVSLDCGLQANSSGYIDPKTNIKYISDASFINTGESRSVAPEFKNYEQSHWTLRSFPQEIRNCYNKSAIKDTTYLIRASFLYGNYDGLNKTPRSDPVPRITSLNLSSSELKGEISPHIISLPMLQTLDLSNNYLTGEVPRFLSQSEHLKILNLENNNLTGSLPPELIKKQKNRLEYLHHGCKPPIVHRDVKTTNILLTEKFNAKLSDFGLSKTYPTDDKSYMSTVIVGTPGYLDPEYFTSNRLTEKSDVYGFGVSLMEVISCRPVISNIQDPETNYIAKWLRTMVAQGDIKNIVDPRLKEAYECNSVWKAVKVALACVSENSSQRPTMNQVVIELKDCLGMELNQRSKIADYKSNKPLLRKSVDDSVEGNSNLDCTNEEVVVKEE 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 317210 323600 + CePI673135_09g000310.1 Cec09g0031 210541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0031 410 Gene3D Transferase(Phosphotransferase) domain 1 198 403 - -
Cec09g0031 410 Gene3D Ribonuclease Inhibitor 79 197 IPR032675 -
Cec09g0031 410 Pfam Protein kinase domain 191 357 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0031 410 ProSiteProfiles Protein kinase domain profile. 50 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0031 410 SUPERFAMILY L domain-like 114 202 - -
Cec09g0031 410 Pfam Leucine rich repeat 123 183 IPR001611 GO:0005515(InterPro)
Cec09g0031 410 Pfam Malectin-like domain 29 120 IPR024788 -
Cec09g0031 410 SMART serkin_6 84 364 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0031 410 PANTHER OS07G0107800 PROTEIN-RELATED 18 112 - -
Cec09g0031 410 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0031 410 SUPERFAMILY Protein kinase-like (PK-like) 199 363 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0031 Cec-Chr9:317210 Cec11g1723 Cec-Chr11:31497152 6.60E-07 dispersed
Cec09g0030 Cec-Chr9:300061 Cec09g0031 Cec-Chr9:317210 5.30E-68 tandem
Cec11g1547 Cec-Chr11:29759261 Cec09g0031 Cec-Chr9:317210 7.30E-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72233 PF00069 Pkinase 2.70E-25 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0031 - - - 0.0