Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0037 ATGGATCATTTGAATTGGAATGGTTATGGATCAAGAGTTGCGATGAAAACGACGACGTCGGCATCGTTTTGGAGCAATTACCAACAAGGAGTTGAAGAAAGGTTCATGATATCCAACTCAAATAATTCCAACTTCTTCAACTCACTTCAAGACTTCCCAATTAAAGAAGCTGCAACTTCTTCAGCTCTGGTTTCAAAAACAGGGGAACCTTTGGTTATCAGTCCTCCATTGTCAAGCTTTACAACATCTAGCAACATGGATGTTGTTGGCCTTGAATCACAGCTCCTCACCGGCTTCAACGGCGACAAATCGGCGACGGTAACGACGTGCTCTCTCGAGTCGTTGGACTGTTTGCTTTCAGCTACAAACAGCAACACAGACACATCAGTTGAAGATGATGGATCAGTTTCAATGATGTTAACAGATTACACCAATTTATGGAACTTCGGAGGAAATGCAGCAGCATCTTCAAGAGAATCTGAAAAGAATGGTTCAAATTCTACAAAGAGAAGCCATGACCAGACTCATTTCAAAGCTGCAGATTACTCTATTTTCTCAAATAACATCATAAATCTATCTGATTCCACTTCAGACAGTGGAGGATTTAGGATCATAACAGATCAGAATCCGCCAAAACAGAAGAAACCCAGATCAGAAAAGCCACCAAGTTCATCAAACATCAATTTTCAACAATCATGTTCATCAGGATCTTCTTGTATTGATCAAGAGCCTGATCCAGAGGCCATTGCACAAATGAAAGAGATGATCTACAGAGCAGCAGCTTTCAGGCCAGTGAATTTGGGGTTGGAAATGATAGAAAAGCCCAAAAGGAAGAATGTGAGAATTTCAACGGACCCACAAACTGTAGCAGCAAGGCAAAGGAGAGAGAGAATCAGTGAGAGAATTAGGGTTTTGCAAAGGCTTGTTCCTGGTGGAAGCAAAATGGATACAGCATCAATGCTTGATGAAGCTGCAAATTATCTCAAGTTCTTGAAGTCTCAGATCAAAGCTTTAGAGAATCTTGGGCAAAAGCTTGAGTCTTTGAATTGCCCTCCAACTAGCATAGCTTTCTCTTTCAACCCATCTTTTCCCATACAAACATCATCATCATCCTCCCATAATAATTTCACGCTCCAAAATCCCAACCACCTTATTAGCCAATATCCCCAAAACTAA 1176 40.99 MDHLNWNGYGSRVAMKTTTSASFWSNYQQGVEERFMISNSNNSNFFNSLQDFPIKEAATSSALVSKTGEPLVISPPLSSFTTSSNMDVVGLESQLLTGFNGDKSATVTTCSLESLDCLLSATNSNTDTSVEDDGSVSMMLTDYTNLWNFGGNAAASSRESEKNGSNSTKRSHDQTHFKAADYSIFSNNIINLSDSTSDSGGFRIITDQNPPKQKKPRSEKPPSSSNINFQQSCSSGSSCIDQEPDPEAIAQMKEMIYRAAAFRPVNLGLEMIEKPKRKNVRISTDPQTVAARQRRERISERIRVLQRLVPGGSKMDTASMLDEAANYLKFLKSQIKALENLGQKLESLNCPPTSIAFSFNPSFPIQTSSSSSHNNFTLQNPNHLISQYPQN 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 357015 358190 - CePI673135_09g000370.1 Cec09g0037 210547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0037 391 Coils Coil 321 348 - -
Cec09g0037 391 MobiDBLite consensus disorder prediction 154 173 - -
Cec09g0037 391 Gene3D - 287 350 IPR036638 GO:0046983(InterPro)
Cec09g0037 391 SMART finulus 288 337 IPR011598 GO:0046983(InterPro)
Cec09g0037 391 MobiDBLite consensus disorder prediction 220 241 - -
Cec09g0037 391 FunFam BHLH transcription factor 285 349 - -
Cec09g0037 391 Pfam Helix-loop-helix DNA-binding domain 291 332 IPR011598 GO:0046983(InterPro)
Cec09g0037 391 MobiDBLite consensus disorder prediction 199 243 - -
Cec09g0037 391 MobiDBLite consensus disorder prediction 368 391 - -
Cec09g0037 391 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 102 377 IPR045843 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0037 391 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 287 347 IPR036638 GO:0046983(InterPro)
Cec09g0037 391 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 282 331 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0173 Cec-Chr2:1688230 Cec09g0037 Cec-Chr9:357015 4.30E-09 dispersed
Cec04g0819 Cec-Chr4:27857040 Cec09g0037 Cec-Chr9:357015 9.20E-20 dispersed
Cec05g2218 Cec-Chr5:33719264 Cec09g0037 Cec-Chr9:357015 2.30E-30 dispersed
Cec08g1655 Cec-Chr8:27890832 Cec09g0037 Cec-Chr9:357015 8.00E-29 dispersed
Cec09g0037 Cec-Chr9:357015 Cec10g1052 Cec-Chr10:23522225 1.00E-12 dispersed
Cec07g1468 Cec-Chr7:30276497 Cec09g0037 Cec-Chr9:357015 9.30E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30147 PF00010 HLH 7.20E-06 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0037 - - - 0.0