Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0056 ATGGACAGTTTATTGGATGTTTTGGTAGTGACAGCCATTTTTTTGACCACCATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACAAACTCCCTTTGGGATCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGTGCTTATTCGGACCGTCCCGAAACCTTCATGGACAAGCGTCGCCGCCTCTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCGTCTTATCCGAAATCTTTAACAGAATTGATGGGGAAGTCCTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCATTGGCAAATTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTACATCCTGGTCAAAGGATGGAGTTTCTCAAGAAACAGTTTCAAGAATTCATAGCTGGGCTCATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGAAAAAGCTGTGGAATTTCCCCTGTCCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTAACAGATGATCTAATAGCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCGGATTGCCCTGCCGCACTTCAACAATTAACTGAGGAAAACTTGAAGATGAAAGGACTGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCGTTTACGCAGAGTGTGATCACTGAGACATTAAGGATGGGAAACATTATAATTGGGGTGATGCGTAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACCTAAGGGTTGGTCAGTGCTGACATACTTTAGATCTGTTCATCTTGACCACAATCACTATGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGACTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAAAAGGATGCCAGTTTGGGTGAAGAGAAGAAGGGACCCATAA 1425 41.4 MDSLLDVLVVTAIFLTTIILYRNCFRLLRSKFCNKLPLGSLGWPFIGETIEFISCAYSDRPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSLANWTENNPIYLQDETKNISFQVLVKILISLHPGQRMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISPVPKDVMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGLKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLIPKGWSVLTYFRSVHLDHNHYDCPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDRIINFPTVRMKKRMPVWVKRRRDP 474
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 493392 497310 - CePI673135_09g000560.1 Cec09g0056 210566
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0056 474 CDD CYP90-like 68 466 - -
Cec09g0056 474 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec09g0056 474 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec09g0056 474 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec09g0056 474 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec09g0056 474 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec09g0056 474 Pfam Cytochrome P450 38 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec09g0056 474 PANTHER CYTOCHROME P450 26 35 447 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER)
Cec09g0056 474 Gene3D Cytochrome P450 29 471 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec09g0056 474 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 27 471 - -
Cec09g0056 474 SUPERFAMILY Cytochrome P450 34 471 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cec09g0056 474 Coils Coil 307 327 - -
Cec09g0056 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec07g0466 Cec-Chr7:4944385 Cec09g0056 Cec-Chr9:493392 1.80E-93 dispersed
Cec09g0056 Cec-Chr9:493392 Cec10g0363 Cec-Chr10:4310216 3.20E-69 dispersed
Cec04g1692 Cec-Chr4:36045955 Cec09g0056 Cec-Chr9:493392 1.40E-137 transposed
Cec06g0163 Cec-Chr6:1663717 Cec09g0056 Cec-Chr9:493392 1.20E-60 transposed
Cec07g1005 Cec-Chr7:24510265 Cec09g0056 Cec-Chr9:493392 6.10E-92 transposed
Cec11g0509 Cec-Chr11:5423359 Cec09g0056 Cec-Chr9:493392 8.10E-86 transposed
Cec07g1484 Cec-Chr7:30431501 Cec09g0056 Cec-Chr9:493392 3.80E-190 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0056 K12638 - csv:101217830 872.078