Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0066 | ATGAGCCCCATCAATCACCACCAACACTTCTCCAAATCCACCTCCGCCGCCGTCACAACCACCACTTCCTCCAACACCACCACCACCCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTCGCCCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCACAAACTCTTCGGCGTTAGCAATATCACTAAAATCATTAGGAATCTCGATCCGTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTCCAATCTGATGTTCGATCCGTCGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGACCTTCAATGCCAAATTGAATATAGCAAGGCGGAGCTTGAGATCGTGCTTCATCAATTGGCTATTTGTAAACAGCAGGCCGCTGCTGCTGCGGCTGCTGCGGCCGCTGCGGCTATTCTTGAGGCGGATCCGATGAGTGGATACGGCGGAATTGAGCATCAATTTGTGGAAGGGTATGAAGGGGAAGGGTTTGTAGTTGGGGAAAATGAGAATGGGGAAAGTTTGGAAGATCAGGACGCGGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCATTACAATTGAAACAAGCCGGCTCTGTTCATGATTTTCACGATATCAAGATCGATACAAATAATAATCACCTTCAACAACAACTTAAATTTCAACACGATCATCATCCTGATCTGGTTCATCAGAGTGAAGAACCTATGCTGAAGATGGACAATGTGATATTGAAAGAAGATTCTGACCCAATACAACAGGCTCAAGATCAAGAACTTAAAGGTTCGGGGGTTAAGGCACCTGCTCCTGCTTCTTTCCTTGAAGTAGGAGATCCAAACCTTCAAATTCCACTTTTCTTATACTCTTTGCTCAGAAAGTGA | 915 | 46.01 | MSPINHHQHFSKSTSAAVTTTTSSNTTTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIRNLDPFEKEEAMRTIIFQSDVRSVDPVGGCYRIIRDLQCQIEYSKAELEIVLHQLAICKQQAAAAAAAAAAAAILEADPMSGYGGIEHQFVEGYEGEGFVVGENENGESLEDQDAEVWGIQDSCSSLQLKQAGSVHDFHDIKIDTNNNHLQQQLKFQHDHHPDLVHQSEEPMLKMDNVILKEDSDPIQQAQDQELKGSGVKAPAPASFLEVGDPNLQIPLFLYSLLRK | 304 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 560485 | 562964 | - | CePI673135_09g000660.1 | Cec09g0066 | 210576 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0066 | 304 | ProSiteProfiles | LOB domain profile. | 30 | 131 | IPR004883 | - | |
Cec09g0066 | 304 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cec09g0066 | 304 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 29 | 227 | - | - | |
Cec09g0066 | 304 | Pfam | Lateral organ boundaries (LOB) domain | 31 | 126 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1035 | Cec-Chr2:17435243 | Cec09g0066 | Cec-Chr9:560485 | 5.60E-19 | dispersed | |
Cec08g1765 | Cec-Chr8:28768122 | Cec09g0066 | Cec-Chr9:560485 | 1.90E-25 | dispersed | |
Cec09g0066 | Cec-Chr9:560485 | Cec09g1957 | Cec-Chr9:36608606 | 8.10E-26 | dispersed | |
Cec09g0066 | Cec-Chr9:560485 | Cec06g1923 | Cec-Chr6:32617791 | 7.10E-22 | transposed | |
Cec09g0066 | Cec-Chr9:560485 | Cec10g1403 | Cec-Chr10:28374804 | 7.10E-22 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30148 | PF03195 | LOB | 7.80E-35 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0066 | - | - | - | 0.0 |