Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0066 ATGAGCCCCATCAATCACCACCAACACTTCTCCAAATCCACCTCCGCCGCCGTCACAACCACCACTTCCTCCAACACCACCACCACCCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCATTCTCGCCCCTTATTTCCCTCACGATCGTCAACGTCAATTCTTAAACGCTCACAAACTCTTCGGCGTTAGCAATATCACTAAAATCATTAGGAATCTCGATCCGTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTCCAATCTGATGTTCGATCCGTCGATCCTGTTGGCGGTTGTTATCGGATTATTCGAGACCTTCAATGCCAAATTGAATATAGCAAGGCGGAGCTTGAGATCGTGCTTCATCAATTGGCTATTTGTAAACAGCAGGCCGCTGCTGCTGCGGCTGCTGCGGCCGCTGCGGCTATTCTTGAGGCGGATCCGATGAGTGGATACGGCGGAATTGAGCATCAATTTGTGGAAGGGTATGAAGGGGAAGGGTTTGTAGTTGGGGAAAATGAGAATGGGGAAAGTTTGGAAGATCAGGACGCGGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCATTACAATTGAAACAAGCCGGCTCTGTTCATGATTTTCACGATATCAAGATCGATACAAATAATAATCACCTTCAACAACAACTTAAATTTCAACACGATCATCATCCTGATCTGGTTCATCAGAGTGAAGAACCTATGCTGAAGATGGACAATGTGATATTGAAAGAAGATTCTGACCCAATACAACAGGCTCAAGATCAAGAACTTAAAGGTTCGGGGGTTAAGGCACCTGCTCCTGCTTCTTTCCTTGAAGTAGGAGATCCAAACCTTCAAATTCCACTTTTCTTATACTCTTTGCTCAGAAAGTGA 915 46.01 MSPINHHQHFSKSTSAAVTTTTSSNTTTTQACAACKYQRRKCAPDCILAPYFPHDRQRQFLNAHKLFGVSNITKIIRNLDPFEKEEAMRTIIFQSDVRSVDPVGGCYRIIRDLQCQIEYSKAELEIVLHQLAICKQQAAAAAAAAAAAAILEADPMSGYGGIEHQFVEGYEGEGFVVGENENGESLEDQDAEVWGIQDSCSSLQLKQAGSVHDFHDIKIDTNNNHLQQQLKFQHDHHPDLVHQSEEPMLKMDNVILKEDSDPIQQAQDQELKGSGVKAPAPASFLEVGDPNLQIPLFLYSLLRK 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 560485 562964 - CePI673135_09g000660.1 Cec09g0066 210576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0066 304 ProSiteProfiles LOB domain profile. 30 131 IPR004883 -
Cec09g0066 304 MobiDBLite consensus disorder prediction 1 21 - -
Cec09g0066 304 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 29 227 - -
Cec09g0066 304 Pfam Lateral organ boundaries (LOB) domain 31 126 IPR004883 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g1035 Cec-Chr2:17435243 Cec09g0066 Cec-Chr9:560485 5.60E-19 dispersed
Cec08g1765 Cec-Chr8:28768122 Cec09g0066 Cec-Chr9:560485 1.90E-25 dispersed
Cec09g0066 Cec-Chr9:560485 Cec09g1957 Cec-Chr9:36608606 8.10E-26 dispersed
Cec09g0066 Cec-Chr9:560485 Cec06g1923 Cec-Chr6:32617791 7.10E-22 transposed
Cec09g0066 Cec-Chr9:560485 Cec10g1403 Cec-Chr10:28374804 7.10E-22 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30148 PF03195 LOB 7.80E-35 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0066 - - - 0.0