Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0077 | ATGGCTGACCATTCTTCCAATCGCGATACTGATTCAGGGTTTGATCATGGCTCACCTCAACCACGTCTTTACAATCCCTACAAGGATCTCCAGGTTCCTTATCGGAACTTCCAGCTTCCAACCTCCCCAGAGTTTCTTTTCGATGAAGAAGCTCGTCGCCAGCGTCGATCTTGGGGCGAGAATCTCACCTTCTACACTGGTTGCGGTTACCTCGCTGGTGCTGTCGGCGGAGCATCTACAGGACTCGTATCCGGCGTCAAATCTTTTGAATCAGGTGATACTATGAAACTCCGGATCAATCGGATCCTGAACTCGTCTGGTCATTCAGGGCGTCTTTGGGGGAATCGGCTCGGCGTGATTGGGTTGCTTTATGCTGGTTTGGAGAGCGGGATTGAGGCTGTGAGGGATACGGACGATGTGTGGAACTGTATTGCAGCAGGACTTGGCACTGGTGCGCTTTATCGTGCAGCAAGAGGGGTGAGATCGGCGGCGGTGGCCGGTGCTATTGGCGGTGTCGTGGTTGGCGTGGCGGTGACGGGTAAGCAGATGTTGAAGCGCCACCGTGACCTACGCAGGTGCATTGCTTCTATCATTTCGCATTTCTATACTTACATCATGTTCAGCTTTTTTCGTTTTAGCAACCTTAACTATTATAGAAGACAGTTACAGGCATTAAAAGAACTGGCAGGTCCTACCACATTCTTTGGCTTCAACAACGTGGGAAGTTTACCGCCTTCGCAAAAATTTCCCACTTTCGCTCGCTGCGCTTTGCCCAACACTCGCCTCCAACTCACGGATCAGATCCGAAGAGTTTGGCAAACCCTAGCTTCCTTCCTTCAATCTCCATCTGTTTCATCTTCCTCTTTCTTCTCTAACATTCCGCAGACTACCCCTGTTCTTAGCCCTTCCGTATGGTATCCCTTAACTCCTTTTCCCACATTGAGACAGAAGTTTAATGCTTGTTCTCCTCTCTATATGGATTGCAAGTTTGGCTTTTCTGTTACAGATTTCCTTTCTCAGAATAGCTCTGGGCAAATTCATAATGTTGTTCTGTTTCTTACTTGGTGGGCCATGGCAGGTTTAGCTCCAGAAGGATCCCAGTTTGATTCTCGCCAATATGATGCTAAAATGAATGAGATTCTTTCGGCAGAAGGCCAGGAATTCTTTACCTCATATGATGAAGTATATGAAAGTTTTGATTCGATGGGGCTGCAAGAAAATCTCCTTAGAGGCATTTATGCCTATGGTTTTGAGAAACCATCTGCAATTCAGCAAAGAGGTATTGTTCCCTTCTGCAAAGGCCTTGATGTGATTCAGCAGGCTCAGTCTGGAACTGGGAAGACTGCAACCTTCTGCTCTGGGATACTTCAGCAACTTGATTATGGTCTAATCCAGTGTCAGGCATTAGTTCTGGCTCCGACTAGGGAGCTGGCTCAACAAATCGAGAAGGTTATGAGAGCTCTTGGAGATTATCTTGGTGTTAAGGTTCATGCTTGTGTAGGAGGGACAAGCGTCCGTGAGGATCAACGCATTCTTCAAGCTGGTGTTCATGTAGTAGTTGGAACACCTGGTCGTGTGTTTGACATGTTAAGGAGGCAGTCTCTTCGCCCAGATTGTATTAAGATGTTTGTATTAGATGAAGCTGATGAAATGCTTTCTCGAGGTTTCAAAGATCAGATCTACGACATTTTCCAGCTGTTGCCGTCAAAAATTCAAGTTGGGGTATTCTCCGCCACAATGCCACCAGAAGCTTTGGAGATCACGAGGAAATTCATGAACAAGCCTGTCAGAATCTTGGTAAAACGTGATGAGCTTACTTTGGAGGGTATCAAACAATTTTACGTAAATGTCGATAAGGAAGATTGGAAGCTCGAAACTCTATGTGATCTCTACGAGACTCTGGCTATCACTCAAAGTGTTATTTTTGTTAACACACGTCGCAAGGTCGATTGGCTTACAGACAAGATGAGAAGCCGAGACCATACCGTATCAGCCACCCATGGTGACATGGACCAGAACACTCGAGATATAATCATGCGTGAATTTCGGTCTGGTTCGTCTCGTGTCCTCATCACAACTGACTTGTTAGCTCGTGGTATTGATGTTCAGCAAGTCTCCCTTGTCATAAATTATGATTTACCAACCCAACCAGAAAATTACCTTCATCGAATTGGGCGAAGTGGGCGTTTTGGAAGAAAGGGTGTTGCCATCAATTTTGTTACAAATGATGATGACAGAATGCTTTTTGATATTCAGAAGTTCTATAATGTGGTCATCGAGGAGCTGCCAGCCAATGTTGCAGATCTCCTATGA | 2313 | 45.96 | MADHSSNRDTDSGFDHGSPQPRLYNPYKDLQVPYRNFQLPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLAGAVGGASTGLVSGVKSFESGDTMKLRINRILNSSGHSGRLWGNRLGVIGLLYAGLESGIEAVRDTDDVWNCIAAGLGTGALYRAARGVRSAAVAGAIGGVVVGVAVTGKQMLKRHRDLRRCIASIISHFYTYIMFSFFRFSNLNYYRRQLQALKELAGPTTFFGFNNVGSLPPSQKFPTFARCALPNTRLQLTDQIRRVWQTLASFLQSPSVSSSSFFSNIPQTTPVLSPSVWYPLTPFPTLRQKFNACSPLYMDCKFGFSVTDFLSQNSSGQIHNVVLFLTWWAMAGLAPEGSQFDSRQYDAKMNEILSAEGQEFFTSYDEVYESFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTNDDDRMLFDIQKFYNVVIEELPANVADLL | 770 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 628920 | 635694 | - | CePI673135_09g000770.1 | Cec09g0077 | 210587 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0077 | 770 | Gene3D | - | 387 | 605 | IPR027417 | - | |
Cec09g0077 | 770 | FunFam | Eukaryotic initiation factor 4A-II | 385 | 604 | - | - | |
Cec09g0077 | 770 | CDD | DEADc_EIF4A | 402 | 599 | - | - | |
Cec09g0077 | 770 | Gene3D | - | 606 | 770 | IPR027417 | - | |
Cec09g0077 | 770 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 428 | 598 | IPR014001 | - | |
Cec09g0077 | 770 | SMART | ultradead3 | 416 | 613 | IPR014001 | - | |
Cec09g0077 | 770 | Pfam | DEAD/DEAH box helicase | 422 | 584 | IPR011545 | GO:0003676(InterPro)|GO:0005524(InterPro) | |
Cec09g0077 | 770 | SMART | helicmild6 | 650 | 731 | IPR001650 | - | |
Cec09g0077 | 770 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 609 | 770 | IPR001650 | - | |
Cec09g0077 | 770 | ProSiteProfiles | DEAD-box RNA helicase Q motif profile. | 397 | 425 | IPR014014 | GO:0003724(InterPro) | |
Cec09g0077 | 770 | CDD | SF2_C_DEAD | 610 | 740 | - | - | |
Cec09g0077 | 770 | ProSitePatterns | DEAD-box subfamily ATP-dependent helicases signature. | 544 | 552 | IPR000629 | - | |
Cec09g0077 | 770 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 466 | 751 | IPR027417 | - | |
Cec09g0077 | 770 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Cec09g0077 | 770 | FunFam | Eukaryotic initiation factor 4A-III | 605 | 770 | - | - | |
Cec09g0077 | 770 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 63 | 173 | - | - | |
Cec09g0077 | 770 | Pfam | Helicase conserved C-terminal domain | 623 | 731 | IPR001650 | - | |
Cec09g0077 | 770 | PANTHER | ATP-DEPENDENT RNA HELICASE DBP3 | 392 | 756 | - | GO:0003723(PANTHER)|GO:0003724(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec08g1370 | Cec-Chr8:25606474 | Cec09g0077 | Cec-Chr9:628920 | 3.90E-62 | dispersed | |
Cec09g0077 | Cec-Chr9:628920 | Cec11g1719 | Cec-Chr11:31439958 | 4.40E-52 | dispersed | |
Cec01g0530 | Cec-Chr1:5417704 | Cec09g0077 | Cec-Chr9:628920 | 3.80E-39 | transposed | |
Cec01g0826 | Cec-Chr1:9228437 | Cec09g0077 | Cec-Chr9:628920 | 2.20E-18 | transposed | |
Cec02g1959 | Cec-Chr2:37458746 | Cec09g0077 | Cec-Chr9:628920 | 1.20E-53 | transposed | |
Cec06g1009 | Cec-Chr6:14949004 | Cec09g0077 | Cec-Chr9:628920 | 2.20E-50 | transposed | |
Cec10g1195 | Cec-Chr10:26037240 | Cec09g0077 | Cec-Chr9:628920 | 1.20E-141 | transposed | |
Cec10g1976 | Cec-Chr10:34541899 | Cec09g0077 | Cec-Chr9:628920 | 1.20E-54 | transposed | |
Cec07g1507 | Cec-Chr7:30669075 | Cec09g0077 | Cec-Chr9:628920 | 8.50E-233 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0077 | K03257 | - | csv:101221456 | 816.224 |