Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0078 ATGGCAACTCCCATGGCTGAAGAAGCAACCATCGATTCCAATTCCACTGCCCACACGGTGATCGCGATTAGTAGGGACAAGAACAGTCAATATGCGGTTAAATGGGCTGTGGAACACCTGTTCAATAGGAAGAACACTGGCGATTGCATCCTTATCCATGTTCGCAACCAGAGTTTGCATCCCCAGGAGGCGGATGCGGTTCCTAAGGAGTATCGTCCACCGACTGAAGCAGAGTTGCATCAGTTCTTCCTTCCCTATCGAGGATTCTGCGCACGAAAAGGAATAGTTACAAAGGAGATAATCATCCATGACATTGATGTTCCAAGTGCACTTATTGACTATGTCAGTAAACACTCCATTAGCAATATTGTTGTGGGTGCTTCCAGCCGGAATGCTATTTTGAGGAAGTTCAAGAATCCCGATGTCCCAACGTGCTTACTCAAATCAACTCCAGAATCATGCTCTGTATATGTCATAGCTAGAGGAAAAGTTCATACTAAGAGATTGAGAAAGCGACATAAGTCACAAACTGATGCGAGAGAAACTCAAACCAGAACTCCAGAAATCGACAGGTCTCTATCGAAAATACAAAAATCAGCATATTCTAATATCTCAGAACTATCTGAAGATAGAAACAGGGATAGTTCTGGCACCAGTAATGATTCAATGTCAGGCATTAGTGACTTTTCGGGGCCTCTCAGTTTCAAATCAATTGAAACATCCTTTGAGAGCCCAGATTTTTCCTTAACCTCCTCAGAGACTAGTACGAGGACCTTTGTCTCCTCTAACACCCCACCTTCCATTGAATCTGAGATGAGAAAGTTGAGGTTTGAACTCAAACAGACGATGGAAATGTATGACTCAGCTTCCAAGGAAGCTGTAGTAGCAAAACAAAAGGCAAATGAACTCCAACAGTTGAAGATGGATATGGAAGAAGACAGAAAAATTGAGCGTGGTAAATCTGCAGAAGAGGTTTTTAGAGCATTGGCAGAGTTTGAGAAGCAGAAGAACAAGGCTGCGACAGAAGCAGCTCTAATGGCACAGAAGTTAGCCGAATTAGAGAACCAGAAAAAACGAATTGTTACTGAAGAAAAAGCTAGGATTGTGGCAGAGGAGAGGAAGAAAACAATGGAGTTATTTGAACGCAGTAATATCTGTTATAGACGATACAGCATTGACGAGATCGAAGCTGCAACAGATCATTTTAATGAGTCAAACAAGATTGGTGAAGGTGGCTATGGACCTGTTTACCAAGCCTTACTTGATCATACTCCTGTTGCCATTAAGATATTGCGACCAGATAGATCTCATGGGCAGAGACAATTCCAGCAAGAGATTGAGGTTCTAAGCCGCATGAGGCATCCGCACATGGTTCTCCTCTTAGGTGCCTGCCCAGAATACGGTTGCCTTGTTTATGAATATATGGAAAACGGGAGTTTGGAAGACCGTCTCTTCCAAAAAGATAACACTCCTCCAATGCCTTGGAGAACACGTTTCAGGATAGCTTCTGACATTGCCACTGCCCTACTCTTCCTTCATCAAATGAAGCCAGAACCTGTGGTGCATCGTGATCTCAAGCCAGCCAACATTCTCTTAGATCACAACTACGTGAGCAAAATAGGTGATGTGGGTTTGGCCAGGCTAGTTCCACCATCGGTTGCTGATAGTGTCACTCAATATCACATGACTGCTGCAGCTGGAACCTTCTGTTACATTGATCCAGAATATCAACAAACAGGAATGTTGGGGGTGAAATCAGATATTTACTCATTTGGTGTTCTGCTACTTCAGCTCATCACTGCAAGGTCACCGATGGGTCTTTCATATCAGGTTGAGGAGGCCATCGAACATGGCAAATTCCCGCAGATACTTGATCCTGCCATTACAGATTGGCCTATTGAAGATACTCTTGGACTCGCTCAATTAGCCCTGAAGTGCTGTGAGCTAAGGAAAAGAGATAGGCCCGACCTCTGTACAGTTCTATTGCCAGAACTGGTCAGGTTAAAAAATCTGGGGTCAGGCGAAATGCCACCAAAGGGCAAGCTCCCAAATGTCGGCAAAGCACGTGATCAACGGGCTTCCAACTCAGTTCCAATTTTGAATGGATCAGAGAGTGAGATCTATGTGAGAAAAAGATGGCAGCGATTGAAAGTGAGTACGAGATTTTGGAGCCAAAAGGGTATTGGTTTGAATACCGTTTCTCCGCAGATAAAGAAAAAATGGAGCTGGAACAACAGTGATACAAAAGTCTTAAATATACCATCACCAATGAGTGGAAAACAAGTTGATGTACTCTCAAAGAAGCAGCAAAGCTCTGAACGCTGTTGGTCTTTTGTAGGTTGTGCTTCTGCTGCTACTATGGGGTTGAAGAAACTACACTCATTTTCATAA 2391 43.62 MATPMAEEATIDSNSTAHTVIAISRDKNSQYAVKWAVEHLFNRKNTGDCILIHVRNQSLHPQEADAVPKEYRPPTEAELHQFFLPYRGFCARKGIVTKEIIIHDIDVPSALIDYVSKHSISNIVVGASSRNAILRKFKNPDVPTCLLKSTPESCSVYVIARGKVHTKRLRKRHKSQTDARETQTRTPEIDRSLSKIQKSAYSNISELSEDRNRDSSGTSNDSMSGISDFSGPLSFKSIETSFESPDFSLTSSETSTRTFVSSNTPPSIESEMRKLRFELKQTMEMYDSASKEAVVAKQKANELQQLKMDMEEDRKIERGKSAEEVFRALAEFEKQKNKAATEAALMAQKLAELENQKKRIVTEEKARIVAEERKKTMELFERSNICYRRYSIDEIEAATDHFNESNKIGEGGYGPVYQALLDHTPVAIKILRPDRSHGQRQFQQEIEVLSRMRHPHMVLLLGACPEYGCLVYEYMENGSLEDRLFQKDNTPPMPWRTRFRIASDIATALLFLHQMKPEPVVHRDLKPANILLDHNYVSKIGDVGLARLVPPSVADSVTQYHMTAAAGTFCYIDPEYQQTGMLGVKSDIYSFGVLLLQLITARSPMGLSYQVEEAIEHGKFPQILDPAITDWPIEDTLGLAQLALKCCELRKRDRPDLCTVLLPELVRLKNLGSGEMPPKGKLPNVGKARDQRASNSVPILNGSESEIYVRKRWQRLKVSTRFWSQKGIGLNTVSPQIKKKWSWNNSDTKVLNIPSPMSGKQVDVLSKKQQSSERCWSFVGCASAATMGLKKLHSFS 796
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 638457 642677 - CePI673135_09g000780.1 Cec09g0078 210588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0078 796 Gene3D Phosphorylase Kinase; domain 1 368 474 - -
Cec09g0078 796 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 474 - -
Cec09g0078 796 MobiDBLite consensus disorder prediction 167 226 - -
Cec09g0078 796 PANTHER OS02G0152300 PROTEIN 21 681 IPR051348 -
Cec09g0078 796 Gene3D HUPs 5 160 IPR014729 -
Cec09g0078 796 CDD STK_N 19 162 - -
Cec09g0078 796 SUPERFAMILY Protein kinase-like (PK-like) 379 661 IPR011009 -
Cec09g0078 796 MobiDBLite consensus disorder prediction 246 267 - -
Cec09g0078 796 SMART serkin_6 402 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0078 796 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 20 159 - -
Cec09g0078 796 Coils Coil 322 366 - -
Cec09g0078 796 ProSiteProfiles Protein kinase domain profile. 402 666 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0078 796 Pfam Universal stress protein family 20 135 IPR006016 -
Cec09g0078 796 Coils Coil 272 316 - -
Cec09g0078 796 MobiDBLite consensus disorder prediction 175 192 - -
Cec09g0078 796 Gene3D Transferase(Phosphotransferase) domain 1 475 672 - -
Cec09g0078 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0078 796 Pfam Protein kinase domain 403 660 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1030 Cec-Chr8:22233607 Cec09g0078 Cec-Chr9:638457 4.20E-184 dispersed
Cec09g0078 Cec-Chr9:638457 Cec11g1173 Cec-Chr11:24038135 4.90E-155 dispersed
Cec11g0176 Cec-Chr11:1932542 Cec09g0078 Cec-Chr9:638457 1.40E-114 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72236 PF00069 Pkinase 6.70E-42 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0078 - - - 0.0