Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0081 ATGAATCTAGGTGCGGCGGAGGAAGAATCGCCGCAGGAGATTCATATTCCGGCCGAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGCGTTGTTTTCAGGTGTTTCGGCTTCTCTTTACCCTATGGTGGTGTTGAAAACTCGGCAACAGGTTGCTCATTCGCAACTTCCTTGCATCAGAACTGCATTTTCACTTGTCCGCCATGAAGGTTTTCGAGCTCTCTACCGAGGATTTGGTACTTCTCTAATGGGGACTATCCCGGCTAGAGCTCTATACATGGGAGCTCTTGAGATTACAAAGAGCTATGTCGGAACTGCCACCATTAAAGTGGGATTTCCAGAGACTACTGCAGCTACCATGGCTAACGCAGCTGCTGGATTGAGTGCTGCAATGGCAGCTCAGCTTGTATGGACTCCTGTTGATGTTGTGAGTCAAAGGCTCATGGTTCAACCTAGCTACAACAATCCCAATTCTTCCTCAACTAATTACATCAATGGAATCGATGCATTTAGAAAGATCCTCAATGCCGATGGCCTCCGAGGCCTCTACCGAGGATTCGGGATATCGATTTTGACCTATGCACCGTCGAATGCTGTGTGGTGGGCTTCTTATTATGTAGCTCAGCGGCTAGTTTGGGGTGGAATTGGCTGCTGTTATTATGCAAAGAAGGTTGATGAAGGCAATGAAAATGGAGGTTGTAGTAATGTCTACAAACCGGATTCCAAGACTGTGATTGCGGTTCAGGGGGCGAGCGCAGCAATGGCCGGGAGTATATCGGCTTTGATAACAATGCCATTTGATACAATCAAGACAAGATTGCAAGTTTTGGATGGGGATGAAAATGGGAGAAGAGGGCCAACTATAGGACAGACATTGAGGAATTTGGTAAGGGAAGGAGGGTGGACGGCATGTTACCGAGGCTTGGCACCGCGATGCGCATCAATGTCGATGTCTGCAACGACGATGATCACTACATATGAGTTTTTGAAACGGCTATCAACAAAGAATCAAGAGAGTTTACCAAGCTAA 1047 46.7 MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAHSQLPCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEITKSYVGTATIKVGFPETTAATMANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPSYNNPNSSSTNYINGIDAFRKILNADGLRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCCYYAKKVDEGNENGGCSNVYKPDSKTVIAVQGASAAMAGSISALITMPFDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQESLPS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 712596 713642 + CePI673135_09g000810.1 Cec09g0081 210591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0081 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 249 338 IPR018108 -
Cec09g0081 348 Pfam Mitochondrial carrier protein 253 341 IPR018108 -
Cec09g0081 348 Pfam Mitochondrial carrier protein 36 110 IPR018108 -
Cec09g0081 348 Pfam Mitochondrial carrier protein 125 217 IPR018108 -
Cec09g0081 348 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 344 - -
Cec09g0081 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Cec09g0081 348 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 216 IPR018108 -
Cec09g0081 348 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085(InterPro)
Cec09g0081 348 PRINTS Mitochondrial carrier protein signature 132 154 IPR002067 GO:0055085(InterPro)
Cec09g0081 348 SUPERFAMILY Mitochondrial carrier 23 335 IPR023395 -
Cec09g0081 348 Gene3D Mitochondrial carrier domain 30 346 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0081 Cec-Chr9:712596 Cec10g0174 Cec-Chr10:1696166 9.30E-10 dispersed
Cec05g0805 Cec-Chr5:6795491 Cec09g0081 Cec-Chr9:712596 1.10E-63 transposed
Cec11g0505 Cec-Chr11:5353691 Cec09g0081 Cec-Chr9:712596 6.00E-71 transposed
Cec05g1996 Cec-Chr5:31957681 Cec09g0081 Cec-Chr9:712596 2.10E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0081 K15121 - csv:101210602 608.601