Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0102 ATGGGTTTCCAAAAGCTATTCTCTCTAAAATATTTGATACCCAGTTGTTTAAAGCCAAAGAAGCTGCTCACAGGCCCTTCTTCTGCTGGATTTCAAACCTCAAAAAAAATCTCTCTTAGAAGAATCTTATCATTGTCTGATATGAGTGTTAGATCATCTTTATCAGTTATTAGTGATCTTTCAAACTCTTGTAATGGTTCAAATCTTCAAATTTTCACCTTTAAAGAACTTGAGGAAGTCACTGAAAACTTTACCAAAAGCAATTATTTGGGTGAAGGAGGATTTGGGCCTGTGTTTAAAGGGTTCCTTGAAGACAATTTCAAGCCTGGTTTGAAATCACAGCAAGTGGCTGTGAAGATTTTGGATTTGGATGGCTCTCAAGGCCATAGAGAGTGGCTGGCTGAAGTGTTTTTTCTTGGGCAATTGAGACACCCAAATCTTGTTAATTTGATTGGATATTGTCTTGAAGATGAACAGAGGCTTCTTGTATATGAATATATGGAAGGAGGAAACTTGGAGAATCTGTTGTTTAAATGTTGTTATGTTTCAAATTTGACATGGTTACAAAGGATAAAAATTGCATTAGGATCAGCAAAAGGCCTTGCTTTCTTGCACGAAACCGAAAAACCGATCATTTTTCGAGATTTCAAGGCTTCGAACATCTTACTCGACTCGGATTACAATCCGAAACTTTCGGATTTTGGGTTGGCCATAAATGGTCCCGACGAAGATGATACACATGTAACGACTCGAATCATGGGAACAGAAGGTTATGCAGCCCCAGAATACATCATGACAGGTCATTTGTCAACAATGAGTGATGTGTTTAGCTTTGGGGTGCTACTATTAGAGTTGCTAACCGGTCAACGAGCGATTGACAAGAATCGACCGAGCCGAGAACAGAACTTGGTGGCTTGGGGAAGACATCTTTTGAAAGATCACCACAAACTTGAAAAGATAATTGATCCAAGGCTTGAGGGGCATTACTCAAATGAAGGGGCCAAAAAATTGGCTACAATAGCTCACCAATGCCTTAGCCACCACCCAAAATGTAGGCCCTCAATGAGCACAGTGGTGAAGGATTTGGAGGCTGTTCTTAACATGAAAGAGTTTCTAACTGAGCCATTTGTGTATATTGTCCCAAGTGAAGATATGAAAGAGGTGGAGATACTGGAGAACTGTCACCGGTACTGGGACCGAAAAGGTCGAAGCTATAGGCTTCGGGTATCGTCTTCGAGATTGAGATCTGGTGCTGTTCATTCTGATACAACCTTTATGGAAAATTTATAG 1290 40.23 MGFQKLFSLKYLIPSCLKPKKLLTGPSSAGFQTSKKISLRRILSLSDMSVRSSLSVISDLSNSCNGSNLQIFTFKELEEVTENFTKSNYLGEGGFGPVFKGFLEDNFKPGLKSQQVAVKILDLDGSQGHREWLAEVFFLGQLRHPNLVNLIGYCLEDEQRLLVYEYMEGGNLENLLFKCCYVSNLTWLQRIKIALGSAKGLAFLHETEKPIIFRDFKASNILLDSDYNPKLSDFGLAINGPDEDDTHVTTRIMGTEGYAAPEYIMTGHLSTMSDVFSFGVLLLELLTGQRAIDKNRPSREQNLVAWGRHLLKDHHKLEKIIDPRLEGHYSNEGAKKLATIAHQCLSHHPKCRPSMSTVVKDLEAVLNMKEFLTEPFVYIVPSEDMKEVEILENCHRYWDRKGRSYRLRVSSSRLRSGAVHSDTTFMENL 429
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 852336 854037 + CePI673135_09g001020.1 Cec09g0102 210612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0102 429 Pfam Protein tyrosine and serine/threonine kinase 87 362 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0102 429 ProSiteProfiles Protein kinase domain profile. 84 377 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0102 429 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 167 374 - -
Cec09g0102 429 PANTHER OS01G0588500 PROTEIN-RELATED 60 366 IPR050823 -
Cec09g0102 429 FunFam Serine/threonine-protein kinase BIK1 51 166 - -
Cec09g0102 429 Gene3D Transferase(Phosphotransferase) domain 1 167 375 - -
Cec09g0102 429 SUPERFAMILY Protein kinase-like (PK-like) 69 390 IPR011009 -
Cec09g0102 429 CDD STKc_IRAK 90 363 - -
Cec09g0102 429 Gene3D Phosphorylase Kinase; domain 1 55 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1753 Cec-Chr5:29173609 Cec09g0102 Cec-Chr9:852336 2.70E-109 dispersed
Cec07g1224 Cec-Chr7:27742574 Cec09g0102 Cec-Chr9:852336 8.00E-109 dispersed
Cec09g0102 Cec-Chr9:852336 Cec11g1169 Cec-Chr11:23979325 2.80E-101 dispersed
Cec11g0155 Cec-Chr11:1786763 Cec09g0102 Cec-Chr9:852336 1.10E-120 wgd
Cec03g1566 Cec-Chr3:33778080 Cec09g0102 Cec-Chr9:852336 1.20E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72237 PF07714 PK_Tyr_Ser-Thr 2.30E-46 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0102 - - - 0.0