Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0142 ATGAAAGAGACCGATATAATGGAAAAGCCCATCGCCGCCGGCCTCTCAAATTCCGGCAACCACCACGAAAAGCCTAAAAACAAATCAAAAAAGCTTCTAATTTTAGCCCTGTCTTCGACCCTGCTCCTGGTCGGCGCCGTCGTGGGGATCGTCGCCGGAGTGACGAAATCGGAAAACTCCGGGAAATCACACGCCATTGTGAAGAGCACGTGCAGCAGCACGCTTTACCCGGATCTGTGCTTTTCTGCAATTTCGAATAGTGAAGGGGCTATGTTGAAAGTTAGTAATCAAAAGGATGTGATTGAGGTGTCAATTAACATAACGGTGAAAGCTGTGGAAGATAATTACTTTAGAGTGAAGAAATTGTGTGGATTGAAGAATATTAGCCATAGAGAGAAAATTGCTCTTCATGATTGTCTTGAGACAATTGATGAGACGCTTGATGAACTTCATAAAGCTATTGTGGACCTTCATCAATACCCCAATAAAAAGTCTCTTAATCAACACGCTGATGATCTTAAAACCTTGCTAAGTTCCGCCATTACCAATCAGGAGACATGCCTTGACGGTTTTTCGCACGACGAGGCAGACAAAAACCTGCGGGATAAGCTAAAAGAGGGGCAAGAGGAAGTAGAACACATGTGCAGCAATGCATTAGCCATGATTAAGAACATGACAGATACAGACATAGCCAACTACGAGGCTAAAATGGGAACAACCAACAATAGAAAGCTCAAGGAAGAACAGAACAACGGCGACGGCATCCAGTGGCCGGAGTGGCTATCGGCCGGAGACCGGCGGCTGCTTCAGTCGTCGTCCGTGAAGCCAGATGTGGTGGTGGCGGCGGATGGCAGTGGGAACTTCCGGACGGTGGCGGCCGCCGTGGGGGCGGCGCCGGAGAAAAGTAGCAAGAGATATGTGATAAGAATTAAAGCTGGGGTTTATAGAGAAAATGTGGAAGTGCCGAAGAAGAAAACGAATATTATGTTTATGGGAGATGGAAGACGTAACACTATAATTACCGGCAGCCGTAATGTGGTCGACGGCAGCACCACTTTTAACTCTGCAACCGTCGCTGCGGTGGGAGGAGGATTTCTAGCGCGTGACATCACATTCCAAAACACAGCCGGTCCGTCGAAGCACCAAGCGGTGGCTCTCCGTGTCGGAGCAGATCTCTCCGCCTTCTACCAGTGCGACATGTTGGCTTATCAAGACACTCTCTACGTCCACTCCAACCGTCAATTCTACATCAACTGTCTCATCTCCGGCACCGTCGATTTCATCTTCGGCAACGCCGCCGCCATTTTCCAAGACTGTGACATTCACGCGCGCAAACCAAACTCAGGTCAGAAAAACATGGTCACGGCCCAAGGACGGTCCGACCCGAACCAAAACACCGGAATCGTTATCCAGAAATGCCGGATCGGTGCCACGTCGGATCTCCGACCGGTCCAGAAGAACTTCCCGACGTTCCTTGGAAGGCCGTGGAAGGAATATTCGAGAACGGTGATTATGCAGTCAACGATTAGTGACGTCATTGACCCGAAGGGATGGCATGAGTGGAGCGGTAATTTTGCACTTAACACGTTGTTTTACGGTGAGTATCAGAATACTGGACCGGGGGCTTCAACCGGGGGGAGGGTGACGTGGAAGGGTTTTAGGGTAATTCGGAGTGCCACGGAGGCTGAAAGTTTTACCGCAGGTAAATTTATTGGCGGTGGGAGTTGGTTGCGCTCTGCTGGCTTTCCTTTCTCTCTAGGATTATGA 1767 49.58 MKETDIMEKPIAAGLSNSGNHHEKPKNKSKKLLILALSSTLLLVGAVVGIVAGVTKSENSGKSHAIVKSTCSSTLYPDLCFSAISNSEGAMLKVSNQKDVIEVSINITVKAVEDNYFRVKKLCGLKNISHREKIALHDCLETIDETLDELHKAIVDLHQYPNKKSLNQHADDLKTLLSSAITNQETCLDGFSHDEADKNLRDKLKEGQEEVEHMCSNALAMIKNMTDTDIANYEAKMGTTNNRKLKEEQNNGDGIQWPEWLSAGDRRLLQSSSVKPDVVVAADGSGNFRTVAAAVGAAPEKSSKRYVIRIKAGVYRENVEVPKKKTNIMFMGDGRRNTIITGSRNVVDGSTTFNSATVAAVGGGFLARDITFQNTAGPSKHQAVALRVGADLSAFYQCDMLAYQDTLYVHSNRQFYINCLISGTVDFIFGNAAAIFQDCDIHARKPNSGQKNMVTAQGRSDPNQNTGIVIQKCRIGATSDLRPVQKNFPTFLGRPWKEYSRTVIMQSTISDVIDPKGWHEWSGNFALNTLFYGEYQNTGPGASTGGRVTWKGFRVIRSATEAESFTAGKFIGGGSWLRSAGFPFSLGL 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1250167 1255260 - CePI673135_09g001420.1 Cec09g0142 210652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0142 588 Pfam Pectinesterase 277 573 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec09g0142 588 Gene3D - 270 588 IPR012334 -
Cec09g0142 588 ProSitePatterns Pectinesterase signature 1. 302 321 IPR018040 -
Cec09g0142 588 PANTHER PECTINESTERASE 31 579 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cec09g0142 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 62 226 IPR035513 -
Cec09g0142 588 FunFam Pectinesterase 271 588 - -
Cec09g0142 588 SMART PMEI_2 62 221 IPR006501 GO:0004857(InterPro)
Cec09g0142 588 Pfam Plant invertase/pectin methylesterase inhibitor 66 221 IPR006501 GO:0004857(InterPro)
Cec09g0142 588 NCBIfam pectinesterase inhibitor domain 38 225 IPR006501 GO:0004857(InterPro)
Cec09g0142 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 226 IPR035513 -
Cec09g0142 588 MobiDBLite consensus disorder prediction 1 25 - -
Cec09g0142 588 ProSitePatterns Pectinesterase signature 2. 421 430 IPR033131 -
Cec09g0142 588 SUPERFAMILY Pectin lyase-like 273 587 IPR011050 -
Cec09g0142 588 CDD PMEI-like_3 69 226 - -
Cec09g0142 588 FunFam Pectinesterase 63 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0142 Cec-Chr9:1250167 Cec09g0860 Cec-Chr9:8088371 4.50E-174 dispersed
Cec04g1923 Cec-Chr4:37622944 Cec09g0142 Cec-Chr9:1250167 1.50E-123 transposed
Cec07g1548 Cec-Chr7:31022653 Cec09g0142 Cec-Chr9:1250167 4.90E-218 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0142 K01051 - csv:101212388 1033.86