Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0147 ATGGCGGGAAATGGAAAGGAGCGCGAGAGCCGAATGGTTCGCGGAGCAAACTCCGGATTCTTTCAGTCATCCGACGATCGGAATGCTTTGTGTGGCCGAATGTTTCGCATTAGCCAGGAAGCTTTTTACTTTGTAAAGAAGACGATCCTTGCGTGCTCGTCAGTTCGGAAATGGGATAATAAAAGCAGAGTCAATAGATCGTGGCCACCAGAAAAGCTCAAGCTGGCATTGACTCGGTTGAGGGAAGGAAATGGTGCTTATCCGCACCGAGTCGCTCCAGAAGGGTGGAAGCCTAGCTGCATTCAAGGAACCACAGATCCAACAGATGCCTCTGCTTTAAGGGTTTTGTACACCAGTTTAAACTCGCCCTCTCAGTTAACCCAGTGGAACGCAAATGGCGATGATCCTTGTGGACAATCATGGAAGGGAATTACTTGCTCCGGCTCACGGGTTACAGAAATAAACTTATCTGGCCTTGGACTCAGTGGATCGCTCGGATACCAGCTTGGAAGTATGACATCGGTAACCAACCTGGATGTGAGTAGTAACAATTTTGGAGGCGAGATTGTCTACAACCTTCCACCTAATCTAAAAAGACTAAATCTTGCACGAAACAACTTCAATAAAGGCATTCCTTATTCCGTTTCGTTGATGACTTCTCTTCAATACTTAAATATCAGTCATAATCAGCTTCAGGATCCATTGAATGATGTGTATGGGCAGCTAACTTCCCTATCCACATTGGATCTATCTTTCAATGCTATGTCAGGCAACCTGCCTCAGAGTTTTAGCTCTCTTTCTAGCATCAGCACTATGTATTTGCAAAACAATCAGTTCACTGGCACAATTGATGTCCTTGCAACTCTACCTCTTAGTAACCTGAATGTTGAAAATAACCGTTTCACTGGATGGATCCCTGAACAACTGAAAAACATCAATCTGCAGACAAATGGCAACTCTTGGAACTCCGGTCCTGCACCCCCTCCTCCACCTGGTACACCCCCAGCCACCAGAAGAAACCGAAATCAACATTCAGGTGGCAGTCCATCAAATGGTGGTTCTAGTGAAGGTCAGAAATCAGGAATTAGTGGTGGTGGCATTGCAGGGATTATCATCTCCGTGCTCGTCGTTGGAGCTGTAGTAGCATTCTTCCTCGTCAAGAGGAGATCCAAGAGATCATCTACAGATATTGAAAAGCTCGACAATCAACCCCTGCAACCTCTTAAAGTGACTGCAGCACAAGAAACAAAGTCAGAAGAGACTTCCTCCGCATTTTATCCAACATCATTTGACACTTCTGCTGCAATAAATCTTAAACCCCCACCTATCGATCGTCATAAATCATTTGATGAAGACGACTTCTCAAAACGAGCTGCAGTCAAGAAGGCTAGTGTTGCAGCTCCCATTAATGTAAAGTCCTATTCCATAGCAGACCTTCAAATTGCTACAGGCAGCTTCAATGTTGAAAATCTTCTTGGTGAGGGATCATTTGGACGTGTATATCGGGCTGAGTTTGACGACGGGAAGGTTCTTGCCGTGAAAAAGATAAATTCATCTGCACTACCTAGGGAATTATCTGAAGATTTCACTGACATTGTTTCTAAAGTCTCCCAGATACACCATCCCAATATAACTGAACTCGTGGGTTATTGCTTAGAGCATGGGCAGCATTTGCTTGTGTATGAGTTCCACAAAAATGGTTCGCTTTACGACTTATTACATCTATCAGATGAATACAACAAACCTCTGATATGGAACTCACGCATTAAGATTGCTTTGGGAACAGCGCGGGCATTGGAGTATCTTCATGAAGTGTGCTCCCCATCTATTGTTCATAGAAATGTCAAGTCTGCTAACATATTGTTAGATGCCGAACTCAGCCCTCACCTTTCTGACTCCGGACTGGAAAGCTTTGTACCAAATGCAGATCAGGCGTTGGATGGCAGTGCAAGTTCAGGATATGCTGCCCCGGAAGTTACCATGTCCGGTCAATATACTCTGCAAAGTGACGTCTACAGTTTTGGAGTAGTCATGTTGGAACTGCTGACTGGACGCAAACCATTCGACAGTTCAAGGGCGAGGACGGAGCAATCTTTGGTTCGATGGGCAACACCTCAGCTTCATGACATTGATGCTTTGACCAAGATGGTTGATCCCGAACTCAAAGGCCTTTACCCTGTTAAATCTCTCTCCCGATTTGCAGATGTGATTGCACTTTGCGTTCAGATGGAACCTGAGTTCAGACCTCCAATGTCGGAGGTGGTCGAAGCGTTGGTCCGTTTGGTGCAGCGAGCAAACATGAGTAAGAGAACATATGGAAATGATAATGCAACATCTCCGAGAGGGGAGATGGGTGGGGAGGACACGCCATAA 2373 45.39 MAGNGKERESRMVRGANSGFFQSSDDRNALCGRMFRISQEAFYFVKKTILACSSVRKWDNKSRVNRSWPPEKLKLALTRLREGNGAYPHRVAPEGWKPSCIQGTTDPTDASALRVLYTSLNSPSQLTQWNANGDDPCGQSWKGITCSGSRVTEINLSGLGLSGSLGYQLGSMTSVTNLDVSSNNFGGEIVYNLPPNLKRLNLARNNFNKGIPYSVSLMTSLQYLNISHNQLQDPLNDVYGQLTSLSTLDLSFNAMSGNLPQSFSSLSSISTMYLQNNQFTGTIDVLATLPLSNLNVENNRFTGWIPEQLKNINLQTNGNSWNSGPAPPPPPGTPPATRRNRNQHSGGSPSNGGSSEGQKSGISGGGIAGIIISVLVVGAVVAFFLVKRRSKRSSTDIEKLDNQPLQPLKVTAAQETKSEETSSAFYPTSFDTSAAINLKPPPIDRHKSFDEDDFSKRAAVKKASVAAPINVKSYSIADLQIATGSFNVENLLGEGSFGRVYRAEFDDGKVLAVKKINSSALPRELSEDFTDIVSKVSQIHHPNITELVGYCLEHGQHLLVYEFHKNGSLYDLLHLSDEYNKPLIWNSRIKIALGTARALEYLHEVCSPSIVHRNVKSANILLDAELSPHLSDSGLESFVPNADQALDGSASSGYAAPEVTMSGQYTLQSDVYSFGVVMLELLTGRKPFDSSRARTEQSLVRWATPQLHDIDALTKMVDPELKGLYPVKSLSRFADVIALCVQMEPEFRPPMSEVVEALVRLVQRANMSKRTYGNDNATSPRGEMGGEDTP 790
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1305249 1317775 - CePI673135_09g001470.1 Cec09g0147 210657

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0147 790 Gene3D Ribonuclease Inhibitor 106 333 IPR032675 -
Cec09g0147 790 ProSitePatterns Protein kinases ATP-binding region signature. 492 515 IPR017441 GO:0005524(InterPro)
Cec09g0147 790 Gene3D Phosphorylase Kinase; domain 1 448 563 - -
Cec09g0147 790 MobiDBLite consensus disorder prediction 770 790 - -
Cec09g0147 790 CDD STKc_IRAK 492 761 - -
Cec09g0147 790 SUPERFAMILY Protein kinase-like (PK-like) 468 758 IPR011009 -
Cec09g0147 790 SUPERFAMILY L domain-like 105 311 - -
Cec09g0147 790 Pfam Leucine rich repeat N-terminal domain 107 147 IPR013210 -
Cec09g0147 790 Pfam Leucine Rich Repeat 244 266 IPR001611 GO:0005515(InterPro)
Cec09g0147 790 Gene3D Transferase(Phosphotransferase) domain 1 565 780 - -
Cec09g0147 790 ProSiteProfiles Protein kinase domain profile. 486 761 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0147 790 Pfam Leucine Rich repeat 172 191 IPR001611 GO:0005515(InterPro)
Cec09g0147 790 Pfam Leucine Rich repeat 219 233 IPR001611 GO:0005515(InterPro)
Cec09g0147 790 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 240 763 IPR046959 -
Cec09g0147 790 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 564 772 - -
Cec09g0147 790 MobiDBLite consensus disorder prediction 315 360 - -
Cec09g0147 790 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 450 563 - -
Cec09g0147 790 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 106 332 - -
Cec09g0147 790 MobiDBLite consensus disorder prediction 337 360 - -
Cec09g0147 790 Pfam Protein tyrosine and serine/threonine kinase 488 758 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0147 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g0512 Cec-Chr8:15060697 Cec09g0147 Cec-Chr9:1305249 3.70E-130 dispersed
Cec09g0147 Cec-Chr9:1305249 Cec10g1755 Cec-Chr10:32243901 7.10E-90 dispersed
Cec07g1541 Cec-Chr7:30982735 Cec09g0147 Cec-Chr9:1305249 2.30E-192 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cec02g0135 . 65 817 Strubbelig Receptor Gene Family AT4G03390 62.2 5.5e-204 708.0
Cec04g1985 . 17 752 Strubbelig Receptor Gene Family AT4G03390 52.1 8.6e-165 577.8
Cec09g0147 . 470 764 Strubbelig Receptor Gene Family AT4G03390 58.7 5.7e-92 335.9
Cec10g1755 . 73 798 Strubbelig Receptor Gene Family AT5G06820 53.8 6.4e-186 647.9
Cec08g0512 . 22 704 Strubbelig Receptor Gene Family AT1G78980 60.4 1.4e-193 673.3
Cec09g0147 . 101 767 Strubbelig Receptor Gene Family AT1G78980 50.1 1.5e-120 430.6
Cec08g0512 . 20 682 Strubbelig Receptor Gene Family AT3G13065 53.7 3.2e-147 519.2
Cec09g0147 . 99 762 Strubbelig Receptor Gene Family AT3G13065 50.6 3.5e-101 366.3
Cec01g0983 . 388 681 Strubbelig Receptor Gene Family AT1G11130 53.4 6.0e-85 312.4
Cec10g1755 . 73 798 Strubbelig Receptor Gene Family AT5G06820 53.8 6.4e-186 647.9
Cec02g0135 . 65 817 Strubbelig Receptor Gene Family AT4G03390 62.2 5.5e-204 708.0
Cec04g1985 . 17 752 Strubbelig Receptor Gene Family AT4G03390 52.1 8.6e-165 577.8
Cec09g0147 . 470 764 Strubbelig Receptor Gene Family AT4G03390 58.7 5.7e-92 335.9
Cec08g0512 . 20 682 Strubbelig Receptor Gene Family AT3G13065 53.7 3.2e-147 519.2
Cec09g0147 . 99 762 Strubbelig Receptor Gene Family AT3G13065 50.6 3.5e-101 366.3
Cec08g0512 . 22 704 Strubbelig Receptor Gene Family AT1G78980 60.4 1.4e-193 673.3
Cec09g0147 . 101 767 Strubbelig Receptor Gene Family AT1G78980 50.1 1.5e-120 430.6
Cec07g1541 . 1 813 Strubbelig Receptor Gene Family AT1G53730 52.1 3.8e-199 691.8
Cec09g0147 . 95 789 Strubbelig Receptor Gene Family AT1G53730 60.7 8.0e-181 630.9
Cec08g0512 . 20 690 Strubbelig Receptor Gene Family AT1G53730 50.5 7.5e-155 544.7
Cec01g0983 . 9 689 Strubbelig Receptor Gene Family AT1G53730 51.4 3.4e-147 519.2
Cec09g0147 . 95 779 Strubbelig Receptor Gene Family AT3G14350 54.7 2.5e-160 562.8
Cec01g0983 . 201 711 Strubbelig Receptor Gene Family AT4G22130 68.3 1.4e-177 619.8
Cec07g1541 . 492 820 Strubbelig Receptor Gene Family AT4G22130 63.4 8.0e-120 427.9
Cec09g0147 . 465 781 Strubbelig Receptor Gene Family AT4G22130 63.6 6.3e-117 418.3
Cec02g0135 . 516 827 Strubbelig Receptor Gene Family AT4G22130 58.8 7.8e-107 384.8
Cec08g0512 . 357 704 Strubbelig Receptor Gene Family AT4G22130 52.1 7.8e-99 358.2
Cec04g1985 . 464 752 Strubbelig Receptor Gene Family AT4G22130 59.5 3.9e-98 355.9
Cec10g1755 . 459 781 Strubbelig Receptor Gene Family AT4G22130 52.3 1.4e-92 337.4
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001486 0 7 2 3 1 2 4 1 2 2 2 2 4 2 2 4 2 3 4 2 2 2 2 1 1 2 2 1 1 1 66
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72238 PF07714 PK_Tyr_Ser-Thr 5.50E-42 CL0016 Cec PK