Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0183 ATGGCAAAACCAAAGAATTCAAATCCCCAACACAAAAGCAACCCTCTTCCAGTTACTCCGACCGGCAAAAAACCAAGAGACTGCAACAAACATCCGGTTTTCCGAGGCGTGCGGAAGAGAAGCTGGGGGAAATGGGTATCGGAAATCCGGCAACCGCGTAAGAAATCCCGAATTTGGCTCGGCACTTTTCCGACGCCGGAGATGGCAGCGCGTGCACACGACACAGCAGCCTTATGCATCAAAGGCGATTCTGCCATCCTCAATTACCCTGAACTTGCAGAGTTCTTGCCCCGGCCGGCGTCGCTCATGCCGCACGACGTTCAGGCTGCGGCCGCCAAAGCCGCGGCGATGGTCAATTTGAATTCCTCTGCATTGCCGTCGCCGTCGGAGGAGGAGGAGGAGCTGAGTGAGATCGTCGAGTTGCCGAATATAGAAGACGATTTTGGTACTGTGTCGCTGAACGAGTTCGGATTGGTTACTGAGTCATGGGAATGGTGGGAGTCCGTGGCAATGCCGTTGGCGGCGGAATTCGGTTGCGGTTATTTTTCCGACCCAACGGCGGCGGAGGAAAGTTCTTACCCGAGCAGCTTTTACGGTGTTCTTTGGGATTAA 612 54.41 MAKPKNSNPQHKSNPLPVTPTGKKPRDCNKHPVFRGVRKRSWGKWVSEIRQPRKKSRIWLGTFPTPEMAARAHDTAALCIKGDSAILNYPELAEFLPRPASLMPHDVQAAAAKAAAMVNLNSSALPSPSEEEEELSEIVELPNIEDDFGTVSLNEFGLVTESWEWWESVAMPLAAEFGCGYFSDPTAAEESSYPSSFYGVLWD 203
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1640324 1640935 - CePI673135_09g001830.1 Cec09g0183 210693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0183 203 Gene3D AP2/ERF domain 33 91 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0183 203 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0183 203 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0183 203 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0183 203 MobiDBLite consensus disorder prediction 1 17 - -
Cec09g0183 203 CDD AP2 34 92 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0183 203 MobiDBLite consensus disorder prediction 1 34 - -
Cec09g0183 203 FunFam Ethylene-responsive transcription factor 2 32 91 - -
Cec09g0183 203 SUPERFAMILY DNA-binding domain 33 90 IPR016177 GO:0003677(InterPro)
Cec09g0183 203 SMART rav1_2 33 96 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0183 203 Pfam AP2 domain 32 82 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0183 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 133 IPR051032 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1260 Cec-Chr8:24584472 Cec09g0183 Cec-Chr9:1640324 5.00E-41 dispersed
Cec09g0183 Cec-Chr9:1640324 Cec11g1573 Cec-Chr11:30021244 5.40E-42 dispersed
Cec05g0041 Cec-Chr5:501622 Cec09g0183 Cec-Chr9:1640324 1.00E-33 transposed
Cec08g0066 Cec-Chr8:1010762 Cec09g0183 Cec-Chr9:1640324 2.10E-22 transposed
Cec06g0984 Cec-Chr6:14046733 Cec09g0183 Cec-Chr9:1640324 1.10E-36 wgd
Cec07g1443 Cec-Chr7:30028836 Cec09g0183 Cec-Chr9:1640324 1.10E-47 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30159 PF00847 AP2 3.40E-14 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0183 K09286 - csv:101217361 329.331