Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0187 ATGGCGTGGTTCACCATTGGAAGCTTTCAAGATTCCTTGAGCTTGCGCTCTTGCAAGGCTTATCTTGCTGAGTTCATCTCCACCTTACTCTTTGTTTTCGCCGGTGTCGGCTCCGCCATTGCCTACAATAAAATAACATCGTCAGCAGCTCTAGATCCAGCAGGGCTAGTTGCGGTGGCGGTTTGCCATGGATTTGCTCTGTTTGTTGCAGTCTCCATCGGAGCTAACATCTCCGGTGGCCACGTCAACCCGGCGGTGACGTTCGGGCTTCTTCTTGGAGACCAAATCAGCCTTATTACCACCATTTTTTACTGGATCGCTCAGCTTCTTGGCTCCATTGTCGCCTGCTACCTTCTCAAATATGTCACCGGCGGCCTTGCGGTTCCGGTCCACAGCGTTGCCGCCGGCGTAGGAGCGGCGGAAGGGGTTGTGACGGAGATTGTAACCACCTTCGGTTTGGTTTACACTGTCTATGCGACGGCTGCAGACCCAAAGAAGGGATCTTTGGGCACAATTGCGCCGATCGCCATCGGTTTCATCGTGGGAGCAAACATCTTGGCGGCCGGACCGTTTTCCGGCGGGTCGATGAACCCGGCTCGATCTTTCGGCCCGGCGGTGGTCAGTGGCGACTTTCATGAGAACTGGATTTACTGGGTTGGGCCGCTCGTTGGCGGTGGCTTAGCTGGGCTTATCTACTTTTACGCCTTTATGGCCTATGGGCCCAGCCCAATTCCAAATGATTTCTAA 747 54.35 MAWFTIGSFQDSLSLRSCKAYLAEFISTLLFVFAGVGSAIAYNKITSSAALDPAGLVAVAVCHGFALFVAVSIGANISGGHVNPAVTFGLLLGDQISLITTIFYWIAQLLGSIVACYLLKYVTGGLAVPVHSVAAGVGAAEGVVTEIVTTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDFHENWIYWVGPLVGGGLAGLIYFYAFMAYGPSPIPNDF 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1663622 1664881 - CePI673135_09g001870.1 Cec09g0187 210697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0187 248 Gene3D Glycerol uptake facilitator protein. 2 240 IPR023271 -
Cec09g0187 248 PANTHER AQUAPORIN-8 5 238 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
Cec09g0187 248 ProSitePatterns MIP family signature. 81 89 IPR022357 -
Cec09g0187 248 SUPERFAMILY Aquaporin-like 15 242 IPR023271 -
Cec09g0187 248 CDD MIP 19 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g0187 248 PRINTS Major intrinsic protein family signature 178 200 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g0187 248 PRINTS Major intrinsic protein family signature 100 119 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g0187 248 PRINTS Major intrinsic protein family signature 63 87 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g0187 248 PRINTS Major intrinsic protein family signature 145 163 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g0187 248 PRINTS Major intrinsic protein family signature 215 235 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g0187 248 PRINTS Major intrinsic protein family signature 19 38 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g0187 248 Pfam Major intrinsic protein 14 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec09g0187 248 FunFam Probable aquaporin TIP1-1 2 247 - -
Cec09g0187 248 NCBIfam MIP family channel protein 23 232 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0414 Cec-Chr1:4361771 Cec09g0187 Cec-Chr9:1663622 3.80E-98 dispersed
Cec01g0497 Cec-Chr1:5064271 Cec09g0187 Cec-Chr9:1663622 1.70E-48 dispersed
Cec08g0780 Cec-Chr8:19589521 Cec09g0187 Cec-Chr9:1663622 9.90E-34 dispersed
Cec08g1264 Cec-Chr8:24605311 Cec09g0187 Cec-Chr9:1663622 3.80E-66 dispersed
Cec09g0187 Cec-Chr9:1663622 Cec10g2002 Cec-Chr10:34803829 2.30E-71 dispersed
Cec09g0187 Cec-Chr9:1663622 Cec04g1088 Cec-Chr4:30392241 4.80E-77 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0187 K09873 - csv:101218611 449.514