Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0212 ATGGCCACGAGGCAGTCTGCTACTGCTCCTCCGAAAGTTGGCGTTGGCCATTCTCGTCTTCATCCTTCTCTCTTCTCTCTCTTAAAAAACCAACAACATCTGTGCCTTCTGTTTCGGCCACTTTTCCACACGAAAAAGGCACATGGGATCTCATCTGTTTTGGCAACAAATCTCAATCAAATACTATGGCGACATGAGCACAAACAACAGATAAACAAGCCGAAAAGGAAGAACTGGGTTTTCATATCATCAACAGCAACAGAATTCCTTGCAAGCAGTTGGGGTAGAGAATTTGTCGCTGGTGGATTTGGTGGCATCGCCGGCATAATCTCTGGCTACCCACTTGATACTCTTCGAGTAAGGCAACAGCAATCCATTTCTGGTTCTGCTTTGAAAATCTTTCGCAATATCATTGCCAACGATGGCGTTGCTGGTCTTTACAGAGGCATGGCTGCTCCTTTGGCCTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAGATCTACGCCGTTCTTTCTCGGGCATTCAACTCCTCCTCCCAATCCAATGGTGACCCTCCAAGCTATAAGGCCGTGGCCTTTGGAGGATTTGGCACCGGAGCTCTTCAGAGCTTCATCTTGTCGCCGGTGGAGCTTGTGAAGATCCGCCTGCAATTGCAGAGTTCAAGCCATGCAGCAGCATCACACCAACAATTAATTTCCTCTTCTTCTTCCCATAGAGGTCCATTGAGCGTCGCCAAAAGCATCTGCAAAACAGAAGGATTGAGAGGAATTTACAGAGGACTTACCATAACCATGCTGAGAGATGCACCTGCACACGGCATCTATTTCTGGACATATGAGTGCATGAGAGAGCAGTTTCATCCTGGCTGCCGGAAGACCGGCCAAGAGAGCGTCGGCACAATGCTGGTCGCCGGAGGGCTTGCTGGAGTTGCCAGCTGGGTTTTTTGTTATCCCTTGGATGTATTGAAGACTAGAATTCAGGGTCAGACACAAAGTTCATCTCGAAAGTACAATGGAATTGTGGATTGTCTTAGCAAAAGTGTGAGAGAAGAGGGTTACAGAGTGCTATGGCGAGGGCTCGGGACAGCAGTTGCCAGAGCATTTGTGGTAAATGGGGCCATTTTTGCTGCTTATGAGATAACATTGAGGTGTTTGTTTAGCAATGGAAGCAATCAGACACAACAATAA 1188 47.81 MATRQSATAPPKVGVGHSRLHPSLFSLLKNQQHLCLLFRPLFHTKKAHGISSVLATNLNQILWRHEHKQQINKPKRKNWVFISSTATEFLASSWGREFVAGGFGGIAGIISGYPLDTLRVRQQQSISGSALKIFRNIIANDGVAGLYRGMAAPLASVTFQNAAVFQIYAVLSRAFNSSSQSNGDPPSYKAVAFGGFGTGALQSFILSPVELVKIRLQLQSSSHAAASHQQLISSSSSHRGPLSVAKSICKTEGLRGIYRGLTITMLRDAPAHGIYFWTYECMREQFHPGCRKTGQESVGTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSSRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEITLRCLFSNGSNQTQQ 395
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1839658 1841308 - CePI673135_09g002120.1 Cec09g0212 210722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0212 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 95 174 IPR018108 -
Cec09g0212 395 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 91 385 IPR050567 GO:0006810(PANTHER)|GO:0022857(PANTHER)
Cec09g0212 395 Pfam Mitochondrial carrier protein 93 177 IPR018108 -
Cec09g0212 395 Pfam Mitochondrial carrier protein 296 386 IPR018108 -
Cec09g0212 395 Pfam Mitochondrial carrier protein 192 286 IPR018108 -
Cec09g0212 395 PRINTS Mitochondrial carrier protein signature 201 219 IPR002067 GO:0055085(InterPro)
Cec09g0212 395 PRINTS Mitochondrial carrier protein signature 258 276 IPR002067 GO:0055085(InterPro)
Cec09g0212 395 PRINTS Mitochondrial carrier protein signature 305 327 IPR002067 GO:0055085(InterPro)
Cec09g0212 395 PRINTS Mitochondrial carrier protein signature 97 110 IPR002067 GO:0055085(InterPro)
Cec09g0212 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 186 285 IPR018108 -
Cec09g0212 395 SUPERFAMILY Mitochondrial carrier 94 379 IPR023395 -
Cec09g0212 395 Gene3D Mitochondrial carrier domain 47 185 IPR023395 -
Cec09g0212 395 Gene3D Mitochondrial carrier domain 187 394 IPR023395 -
Cec09g0212 395 ProSiteProfiles Solute carrier (Solcar) repeat profile. 296 384 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0212 Cec-Chr9:1839658 Cec10g2227 Cec-Chr10:36656643 3.00E-20 dispersed
Cec07g1425 Cec-Chr7:29855530 Cec09g0212 Cec-Chr9:1839658 1.20E-122 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0212 K15109 - csv:101222165 535.028