Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0213 ATGGCGATTGGGAATGGAATTACGACACGAATTCTTCCATTTTCCTGCTTTCTATACTGCTATTATTGCTTTATATTAGTGTTCTTTTTGGTGGAGTTTTCCCATGGCCAGTCTACACAAACCAATAATGTTCTTACACAAGGCCAAAAGCTATCAATTGGGTCTCAATTAGTTTCATCCACCGCCAACTTTATGCTAGGATTTTACAATCCTTACAATTCTAATACCACTTATTTAGGAATCTCCTACAACACTAATCACCAGAAGCCAATCTGGATAGCCAATCCAAACTCCCCATTTCCCAGCAATTCCACTCCCATCAGCCTCACCATCGACGCCAACGGCAGCTTCAAAATTCAAAATGGCTATTATTCCTTTTCACTCTTCGATGTCGGGCAACCAACCACCAGCAGCGCCATATTGCAAGACGACGGCAACTTTGTACTACGAGAGCTGAACAGAGATGGATCGGTTAAGCAAATTCTGTGGCAGAGCTTTGATCATCCAACAGATACTCTGCTTCCCGGAATGAAAATTGGGATCAATCACAAAACAAACTCCACTTGGTCATTAACATCATGGAGAACCACTGAATCTCCCATGGCAGGAGCATTCACTCTGGCAATTAATCCAAACAATACATATCAATTACTGATGTTTTTCAGAGGTGCTCTGTTTTGGAGCAGCGGGAATTGGAAAGACGGTTCGTTCGAATTCTTACAATATCTGTCGAATTTCGACCCTTACAACAGCAATCAAAACCAAGAAATGTATATCAATCGAATTTCGAATGAGAATGAAACGTTTTTCATTTACTACATTCCGAAATTCGATCGATCTCCCACTCCTTACGCGTATCGAAATCTATATTACCCAAAATCAGGGGAATTTGTACTACCCCAATTGAGATTAGAAGATGGTGGGAATTTGGGGATTAACAATCAGAGTTCGTACTCTGTTTGCTCCCTGTTTGAAAACGAGGATGGAGGGTGTGTGTGGAAAGAACAGCAGAAAATTCCGGAGTGCAGGAATTGGCTGTATGGGTTTAGCGAGCCATTTAGCCCGAGGTTTGGTTTCATGGAGGAGGGAATTAATGGTTCTAATTACAACAAACAAAGTAGGAACTTAACCATGTTTGAATGTGAAACTATTTGCATTTTTGATTGTGATTGCATAGCTATTGGATTTAGCGATGAAGAAGATGGCACCAGCTGTGAGATTTGGAAATCAGGAGCCACGTTTAATTCAGTCTCCGCCGGTTCACGAGAGTATTTCTTTCTGGACCCCGCGACCCAGACCGGCCAAGTGACGGGGAAAATGAAGAGAAGCTTTGTTTGCGTGATGGGTTTCATATCCGAAGGTTTTAATATTTTAGGAATAATGATAAGACAAATAAGAGATGGGAAAAAGAATCCTGAATTGCAAATTTTTGACTTTGAAAGCATCGTTTCTGCCACAAATAATTTTGGAGATGAATGTAAGCTTGGACAAGGTGGTTTTGGACCTGTTTATAAGGGAATTTTGACGGATGGCCAAGAAGTAGCCATTAAAAGATTGTCTAAGAATTCAGGACAAGGATTGGTGGAGTTCAAGAATGAAACTATTTTGATTGCTAAACTTCAACACACAAATTTGGTTAGGCTTATTGGTTGCTGCATTTATAAAGAAGAGAAATTGTTGGTGTATGAGTACATGCCCAACAAAAGCCTTGACTTCTTCCTCTTTGACTCCAAGAAGAAGTTAGCATTAAATTGGGAGAAACGTTTGCACATCATTCAAGGAATCGTTCAAGGACTACTCTACCTTCACTACTATTCAAGGGTACGAATAATTCATCGAGATTTAAAAGTCAGCAATATCTTACTCGATGATGAGATGAATGCAAAAATATCAGATTTTGGTATGGCTAGAGTGTTTAAGCCATCAGAGCATGAAGCAAATACAAGTCGAGTGGTTGGTACATATGGCTATATATCACCAGAATATGCAATGGAGGGCATTTTCTCAATAAAGTCGGACGTGTACAGCTTTGGAATATTATTATTGGAGATCATAACAAGTCGAAAAAACTACAACAATTATGACACAGAACGACCACTCAATCTCATAGGATACGCATGGGAATTGTGGGTGAATGGGAAAGGAGAAGAGCTGATTGATTTGGGTTTGTGCAATAACTGTGATGAGAAAGCAAAGGCTTTAAGGTGCATTCATGTTAGTCTTTTGTGCGTCCAACAAGTTCCGGCGGATAGGCCGACGATGTTGGATGTTTATTTCATGATTAATAATGATTCGACTCAACTTCCCTCTCCCAAACAACCTGCTTTTTTCGTTGCTCAAAACCCAAATTCCTCCCAACTACAACTGGTGGAGGTGGTCGATACTGTGCTCATACAACCAGCTGCAGAGCCAACATTAGAAATTTCTTCATTCAATACTATGTCACTCTCACTCATGGATTTGGGATTTGCGAGCCGTGAATTGCCGCGCACGAGCGATCCCTCTTTGTGCTCTTCGACTCGGGCCAATTTCTCAGCCATGTCGTCCAAGCAAGGAGGGAAGGCAAAGCCTTTGAAGCAACCCAAGGTTGAGAAGAAAGATTACGACGAGAGCACTAAAACCCACTCAGTCCGACCATCTCCGAGACCAGCTCTCGGGCCTACTTTGGAGCAGTCGTCGGTGTCTTACTATGCTTCTCTCCTCCAATCTTGCGTCGTCCGAAAGGCGATAGAGCCTGGAAAGCAGCTTCACGCTCGTATGTGGCAAATGGGTATTAGTTTCAACCCTCTCTTGGCTACTAAACTACTCAATCTTTACTGCATCTGCAACTCTTTGATAAATGCTCATCTCTTGTTTGATAGAATTTCCAAACGAAATCTGTTCCTTTGGAATGTTATGATACGAGGTTATGCTTGGAATGGACCATATGAGGTTGCAATTTCACTTTACTACCAAATGCAAGATTATGGGCTTGTGCCCGATAAATTTACCTTCCCCTTTGTGCTCAAAGCTTGCTCGGCTCTTTCTGCCATGGAAGAGGGAAAGAAGATTCATAAAGATGTCTTACGCACTGGGTTGGAGAGCGATGTGTTTGTTGGTGCGGCCCTGATTGATATGTATGCTAAATGTGGTTGTGTAGAGAGTGCTCGACAGGTGTTTGATAAAATTGATGAGAGAGATGTTGTGTGTTGGAACTCCATGCTTGCAGCTTATTCTCAAAATGGGCAACCAGATGAGTCGCTTGCTCTCTGCAGAGTGATGGCTTTTGATGGAGTGAAGCCCACCGAGGGGACACTTGTCATCTCCATCTCAGCTTCAGCTGACAATGGCCTTCTACCTCAAGGGAAGGAGCTTCATGGTTATAGTTGGAGACATGGATTTGAATCGAATGACAAGGTGAAAACTGCATTGGTGGATATGTATGCCAAGAGTGGCTCGGTAAATGTTGCTAGGAGCTTGTTTGAGATATTGGAGGAGAAGAGGGTAGTCTCTTGGAACACCATGATCACTGGGTATGCAATGCATGGTCATGCAAATGAAGCTTTGGACCTGTTTAAGGAGATGAAAGGGAAAGCTTTACCTGATCATATAACTTTTGTTGGAGTTCTCGCTGCCTGCAGCCATGGAGGATTGCTTGATGAAGGGAAGATGTATTTCAGATCAATGGTAACTGATTACGTTATATGTCCTACTGTTCAACACTACACTTGTATGATTGATCTACTTGGTCATTGTGGTCATTTGGAAGAAGCTTACAACCTCATAATGGAAATGAGAGTAGAGCCTGATGCTGGTGTCTGGGGTGCATTGCTTCACTCGTGCAAAATCCATGGCAATGTGGAGATGGGTGAGCTAGCTTTAGAGAAGTTGATTGAACTTGAACCTGATGATGGTGGGAACTATGTGATTCTATCGAATATGTATGCTCAAGCTGGTAAATGGGAAGGAGTTGCAAGACTAAGGAATCTCATGATGAATAAGGGATTGAAGAAAAGTATTGCTTGTAGTTGGATAGAAGTGAGAAACAAAGTTCATGCCTTCTTGTCGGAAGATACTTCTCATCCCGAGTCTGAAGCAATTTATTCCGAGTTAAAACGGATAGGGAAGTTGATGAAAGAAGCTGGCTATGCACCGCAAATTGGGTCAGTTTTCCATGATGTTGAAGATGATGAAAAGGTTGATATGGTGTGTTGTCATAGTGAAAGATTGGCCATTGCTTTTGGACTCATTAGCACACCTGTGGGAACTAAGCTCTTGATTATCAAGAACCTTCGAGTTTGTGAGGATTGCCATGTTGCAATCAAGTTCATATCGAAGATCACAGAGAGGGAAATTACTATTAGAGATGTTAATCGCTATCATCACTTCAAAGATGGACTCTGCTCTTGTGGTGATTTCTGGACGAACAATGGAAGGATTGAGGCATTGAGCAGCTACCCTTTTCGTCGTCCACCAGATGAAAAAGTGAAGGCATCAGTGGATCTGGCGAATATTCAAAAGAAGAAGGAAGAGGAAAAGGCGCTCAGGGAACTTAGGGCGAAGGCCCAACAGAAGGGGACCTTTGGAGGTTCTGGCCTGAAGAAGAGTGGGAAGAAATGA 4599 42.23 MAIGNGITTRILPFSCFLYCYYCFILVFFLVEFSHGQSTQTNNVLTQGQKLSIGSQLVSSTANFMLGFYNPYNSNTTYLGISYNTNHQKPIWIANPNSPFPSNSTPISLTIDANGSFKIQNGYYSFSLFDVGQPTTSSAILQDDGNFVLRELNRDGSVKQILWQSFDHPTDTLLPGMKIGINHKTNSTWSLTSWRTTESPMAGAFTLAINPNNTYQLLMFFRGALFWSSGNWKDGSFEFLQYLSNFDPYNSNQNQEMYINRISNENETFFIYYIPKFDRSPTPYAYRNLYYPKSGEFVLPQLRLEDGGNLGINNQSSYSVCSLFENEDGGCVWKEQQKIPECRNWLYGFSEPFSPRFGFMEEGINGSNYNKQSRNLTMFECETICIFDCDCIAIGFSDEEDGTSCEIWKSGATFNSVSAGSREYFFLDPATQTGQVTGKMKRSFVCVMGFISEGFNILGIMIRQIRDGKKNPELQIFDFESIVSATNNFGDECKLGQGGFGPVYKGILTDGQEVAIKRLSKNSGQGLVEFKNETILIAKLQHTNLVRLIGCCIYKEEKLLVYEYMPNKSLDFFLFDSKKKLALNWEKRLHIIQGIVQGLLYLHYYSRVRIIHRDLKVSNILLDDEMNAKISDFGMARVFKPSEHEANTSRVVGTYGYISPEYAMEGIFSIKSDVYSFGILLLEIITSRKNYNNYDTERPLNLIGYAWELWVNGKGEELIDLGLCNNCDEKAKALRCIHVSLLCVQQVPADRPTMLDVYFMINNDSTQLPSPKQPAFFVAQNPNSSQLQLVEVVDTVLIQPAAEPTLEISSFNTMSLSLMDLGFASRELPRTSDPSLCSSTRANFSAMSSKQGGKAKPLKQPKVEKKDYDESTKTHSVRPSPRPALGPTLEQSSVSYYASLLQSCVVRKAIEPGKQLHARMWQMGISFNPLLATKLLNLYCICNSLINAHLLFDRISKRNLFLWNVMIRGYAWNGPYEVAISLYYQMQDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVLRTGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLAAYSQNGQPDESLALCRVMAFDGVKPTEGTLVISISASADNGLLPQGKELHGYSWRHGFESNDKVKTALVDMYAKSGSVNVARSLFEILEEKRVVSWNTMITGYAMHGHANEALDLFKEMKGKALPDHITFVGVLAACSHGGLLDEGKMYFRSMVTDYVICPTVQHYTCMIDLLGHCGHLEEAYNLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLIELEPDDGGNYVILSNMYAQAGKWEGVARLRNLMMNKGLKKSIACSWIEVRNKVHAFLSEDTSHPESEAIYSELKRIGKLMKEAGYAPQIGSVFHDVEDDEKVDMVCCHSERLAIAFGLISTPVGTKLLIIKNLRVCEDCHVAIKFISKITEREITIRDVNRYHHFKDGLCSCGDFWTNNGRIEALSSYPFRRPPDEKVKASVDLANIQKKKEEEKALRELRAKAQQKGTFGGSGLKKSGKK 1532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1845182 1854322 - CePI673135_09g002130.1 Cec09g0213 210723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0213 1532 SMART blect_4 42 169 IPR001480 -
Cec09g0213 1532 FunFam Pentatricopeptide (PPR) repeat-containing protein 1224 1386 - -
Cec09g0213 1532 FunFam Pentatricopeptide repeat-containing protein mitochondrial 1114 1223 - -
Cec09g0213 1532 ProSiteProfiles Bulb-type lectin domain profile. 42 162 IPR001480 -
Cec09g0213 1532 SUPERFAMILY Protein kinase-like (PK-like) 472 781 IPR011009 -
Cec09g0213 1532 Gene3D Tetratricopeptide repeat domain 1136 1359 IPR011990 GO:0005515(InterPro)
Cec09g0213 1532 Gene3D Tetratricopeptide repeat domain 888 1005 IPR011990 GO:0005515(InterPro)
Cec09g0213 1532 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1060 1094 IPR002885 -
Cec09g0213 1532 MobiDBLite consensus disorder prediction 857 876 - -
Cec09g0213 1532 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 459 564 - -
Cec09g0213 1532 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 198 IPR036426 -
Cec09g0213 1532 Pfam D-mannose binding lectin 91 195 IPR001480 -
Cec09g0213 1532 SMART serkin_6 489 759 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0213 1532 Coils Coil 1498 1518 - -
Cec09g0213 1532 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 565 769 - -
Cec09g0213 1532 Gene3D Phosphorylase Kinase; domain 1 463 564 - -
Cec09g0213 1532 Pfam DYW family of nucleic acid deaminases 1375 1467 IPR032867 GO:0008270(InterPro)
Cec09g0213 1532 MobiDBLite consensus disorder prediction 845 885 - -
Cec09g0213 1532 Pfam PPR repeat family 959 1005 IPR002885 -
Cec09g0213 1532 Pfam PPR repeat family 1162 1207 IPR002885 -
Cec09g0213 1532 Gene3D Transferase(Phosphotransferase) domain 1 565 773 - -
Cec09g0213 1532 Pfam Protein tyrosine and serine/threonine kinase 493 701 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0213 1532 ProSiteProfiles Protein kinase domain profile. 489 776 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0213 1532 FunFam Pentatricopeptide repeat-containing protein At3g16610 971 1113 - -
Cec09g0213 1532 Pfam E motif 1277 1339 IPR046848 -
Cec09g0213 1532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 610 622 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0213 1532 Pfam PPR repeat 1235 1259 IPR002885 -
Cec09g0213 1532 Pfam PPR repeat 1062 1091 IPR002885 -
Cec09g0213 1532 Pfam PPR repeat 1135 1161 IPR002885 -
Cec09g0213 1532 Pfam PPR repeat 1035 1060 IPR002885 -
Cec09g0213 1532 CDD STKc_IRAK 495 763 - -
Cec09g0213 1532 Gene3D Tetratricopeptide repeat domain 1006 1119 IPR011990 GO:0005515(InterPro)
Cec09g0213 1532 MobiDBLite consensus disorder prediction 1513 1532 - -
Cec09g0213 1532 Gene3D - 37 167 IPR036426 -
Cec09g0213 1532 NCBIfam pentatricopeptide repeat 962 994 IPR002885 -
Cec09g0213 1532 NCBIfam pentatricopeptide repeat 1163 1189 IPR002885 -
Cec09g0213 1532 NCBIfam pentatricopeptide repeat 1062 1096 IPR002885 -
Cec09g0213 1532 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 156 777 - GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec09g0213 1532 Pfam Translation machinery associated TMA7 1493 1532 IPR015157 -
Cec09g0213 1532 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 1161 1195 IPR002885 -
Cec09g0213 1532 CDD B_lectin 51 169 IPR001480 -
Cec09g0213 1532 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 959 993 IPR002885 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2101 Cec-Chr2:38604661 Cec09g0213 Cec-Chr9:1845182 2.10E-93 dispersed
Cec05g0883 Cec-Chr5:7648055 Cec09g0213 Cec-Chr9:1845182 1.10E-86 dispersed
Cec05g1141 Cec-Chr5:10303459 Cec09g0213 Cec-Chr9:1845182 8.70E-137 dispersed
Cec06g0528 Cec-Chr6:5896600 Cec09g0213 Cec-Chr9:1845182 8.00E-118 dispersed
Cec07g0950 Cec-Chr7:23358487 Cec09g0213 Cec-Chr9:1845182 3.00E-134 dispersed
Cec08g0865 Cec-Chr8:20459147 Cec09g0213 Cec-Chr9:1845182 1.40E-125 dispersed
Cec09g0213 Cec-Chr9:1845182 Cec09g0257 Cec-Chr9:2265806 3.70E-204 dispersed
Cec10g0044 Cec-Chr10:515598 Cec09g0213 Cec-Chr9:1845182 2.30E-100 dispersed
Cec10g0594 Cec-Chr10:7873006 Cec09g0213 Cec-Chr9:1845182 9.90E-119 dispersed
Cec10g0596 Cec-Chr10:7888022 Cec09g0213 Cec-Chr9:1845182 1.00E-123 dispersed
Cec10g1897 Cec-Chr10:33802109 Cec09g0213 Cec-Chr9:1845182 3.80E-118 dispersed
Cec11g0368 Cec-Chr11:3870118 Cec09g0213 Cec-Chr9:1845182 6.20E-99 dispersed
Cec09g0213 Cec-Chr9:1845182 Cec03g0119 Cec-Chr3:1179195 1.40E-142 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72239 PF07714 PK_Tyr_Ser-Thr 2.80E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0213 - - - 0.0