Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0234 ATGGAGATCAAAGAAAAGAAGAGAATTTCAAGTATCTCCTCTCCATTAATGTCATCCTCTTCGATGGCTATCCTCCTGGTTTTTCTTTGTTTCATTTTTAGCGATCCCAGCACAGCATTCGTAGCCGGGGCGGGCACTTCGTTCATTCCCAAAGACAATTTTCTCATTGACTGTGGTGCCAACAAGGAACTTGGTGCACTCCCTGATGGAAGAGTGTTCAAAACTGATGAGCAATCCAAGCAACTCTTAGATGCCAAGGATGATATCATAGCAACCGCTGCACCTGAGAAGAAGGCACCGTCCCCGGTCGATTTGACAGCAAGAGTTTTCCTCCAGGAAGCTACTTACATTTTTCAGATGGCAGAGCCTGGATGGCATTGGGTGCGCCTACATTTCATGCCTGTTAAAAGCAATGACTTCGATCTCTTGCAGGCTAAATTTTCAGTAGCTACTGAAAAGTATGTGTTGCTTCACAGCTTCAACATCAACAATGAATCCACATTTGTTCTCAAGGAGTTTCTCCTCAATATCACTGAACCAAAACTGTCAATCAAGTTCTTCCCTATGAGGAACTCAGCCGCTTTCATCAATGCCATCGAGGTCGTTTCGGCTCCGGTGGACTTGATTGCTGACTCGAATGTGGAGCTGTCTCCAGTTGGGACTATTGAGGGCCTGACAAAATATGCATTTCAGACATTGTATAGGTTAAACATGGGAGGACCTATAATCAATCCAAGAAATGACACTCTTGGGAGGACATGGGAGACAGATGAAGTTTACAGGACACCCAAAGCTGCTGGTAGGAATGTGGTTGTTGAGACCAACACCATTAAATACCAAGGAGGATTGAAAGAAACAGGCATGTTAATTGCTCCTCCCAGTGTTTATGCAAGTGCAGTTCAAATGGGAGATGCTCAAGTTAGTGTACCAAATTTCAATATCACATGGAAATTTGAGGCAGATCCCTCATTTGGGTATCTAATTCGCTTCCATTTCTGTGACATTGTCAGCAAAGTACTCAATAATCTGTATTTTAATGTATATGTGAACGGGAAGGCTGCCATAACCAACTTGGATTTGTCACACAAGCTAGGAAGTTTGGCAACTGCATACTACAAGGATGTTGTGGTTAATGCTTCCCTGATTGTAGATGGACTGACAGTTCAAATTAGTCCAGCTAATGTCGAAACCGGTGATGCGAATGCCATTCTAAATGGCATAGAGGTATTGAAAATAAGCAATTCTGTTAATAGTCTGGATGGAGAGTTTGGAGTGGATGGTAGGTCGGCAAATGGGTCTAACCGTGGCACGGTCGCGGCTGTTGGGTTTGCGATGATGTTTGGGGCATTTGTTGGGCTCGGTGCCATGGTGATGAAATGGCATAAAAGGCCTCAAGATTGGCAGAAGAGGAACAGTTTCTCTTCCTGGTTGCTTCCTGTACATGCTGGTGACTCAAGCTTTATGACAAGTAAGACTTCATATGGGTCACACAAGACCAACATTTACTCCTCTACTTTAGGCCTTGGTAGGTTCTTCACTTTGGGAGAATTACAAGAAGCCACAAAGAACTTTGATCCCAATTCAATAATTGGTGTTGGTGGGTTTGGAAATGTGTACCTTGGAGTGATTGATGAAGGGACCAAAGTTGCAGTTAAGAGAGGAAATCCACAATCTGAACAAGGCATAACAGAATTCCAGACAGAAATTCAAATGCTTTCCAAACTCAGACACAGGCATTTGGTTTCTTTGATCGGTTACTGTGATGAAAACGCTGAAATGATCTTGGTATATGAGTTCATGTCAAATGGCCCATTCAGAGATCACTTATATGGAAAGGACTTGTCTCCATTGTCATGGAAGCAAAGGCTAGAGATCTGTATCGGAGCGGCTCGAGGCCTTCATTACCTTCACACAGGAACAGCACAGGGAATCATCCACCGTGATGTCAAAACAACCAACATTTTACTGGACGAAAACTTCACCGCCAAAGTCGCCGATTTCGGGCTGTCAAAGGATGCTCCAATGGGGCAAGGACATGTCAGTACTGCAGTGAAGGGAAGTTTTGGATATTTGGATCCAGAGTACTTTAGGAGGCAACAGTTGACAGAAAAATCAGATGTTTATTCCTTTGGAGTTGTTCTGCTTGAGGCTTTGTGTGCAAGGCCAGCAATCAACCCATCTTTGACAAGAGAACAAGTGAACTTGGCTGATTGGGCAATGCAATGTAAGAAAAAAGGGTGTTTGGAAAAGATAATGGATCCCCTTCTAGTTGGAGCCATAAATCCTGAGTCCATGAAGAAGTTTGCAGAAGCAGCAGAGAAGTGTCTTGCTGAACATGGTGTAGATAGGCCAAGCATGGGGGATGTATTGTGGAATTTGGAGTATGCATTACAACTTCAAGAAGCATTCTCACAAGGCAAGACTGAAGATGAAAACAAAGCTGCAGGCACAGCAACCGTCGCCCCTGCTACCCCTACCACTGTCGATGCTTCGACAAATGCACCGAACTCCGACAACCGCCCTGTAGTGCAGCCAGAACAGAATAGGCAACCAGCAGAGGTACAAGCCATTGATGATCACTCAGGAAGTGCAATGTTTGCTCATTTTTCTAATCTCAATGGTAGATGA 2628 44.1 MEIKEKKRISSISSPLMSSSSMAILLVFLCFIFSDPSTAFVAGAGTSFIPKDNFLIDCGANKELGALPDGRVFKTDEQSKQLLDAKDDIIATAAPEKKAPSPVDLTARVFLQEATYIFQMAEPGWHWVRLHFMPVKSNDFDLLQAKFSVATEKYVLLHSFNINNESTFVLKEFLLNITEPKLSIKFFPMRNSAAFINAIEVVSAPVDLIADSNVELSPVGTIEGLTKYAFQTLYRLNMGGPIINPRNDTLGRTWETDEVYRTPKAAGRNVVVETNTIKYQGGLKETGMLIAPPSVYASAVQMGDAQVSVPNFNITWKFEADPSFGYLIRFHFCDIVSKVLNNLYFNVYVNGKAAITNLDLSHKLGSLATAYYKDVVVNASLIVDGLTVQISPANVETGDANAILNGIEVLKISNSVNSLDGEFGVDGRSANGSNRGTVAAVGFAMMFGAFVGLGAMVMKWHKRPQDWQKRNSFSSWLLPVHAGDSSFMTSKTSYGSHKTNIYSSTLGLGRFFTLGELQEATKNFDPNSIIGVGGFGNVYLGVIDEGTKVAVKRGNPQSEQGITEFQTEIQMLSKLRHRHLVSLIGYCDENAEMILVYEFMSNGPFRDHLYGKDLSPLSWKQRLEICIGAARGLHYLHTGTAQGIIHRDVKTTNILLDENFTAKVADFGLSKDAPMGQGHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLLEALCARPAINPSLTREQVNLADWAMQCKKKGCLEKIMDPLLVGAINPESMKKFAEAAEKCLAEHGVDRPSMGDVLWNLEYALQLQEAFSQGKTEDENKAAGTATVAPATPTTVDASTNAPNSDNRPVVQPEQNRQPAEVQAIDDHSGSAMFAHFSNLNGR 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2017553 2020180 + CePI673135_09g002340.1 Cec09g0234 210744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0234 875 FunFam Receptor-like protein kinase FERONIA 600 814 - -
Cec09g0234 875 CDD STKc_IRAK 530 794 - -
Cec09g0234 875 Pfam Malectin-like domain 56 411 IPR024788 -
Cec09g0234 875 MobiDBLite consensus disorder prediction 819 851 - -
Cec09g0234 875 SMART serkin_6 524 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0234 875 FunFam Putative receptor-like protein kinase 53 205 - -
Cec09g0234 875 FunFam Receptor-like protein kinase FERONIA 229 414 - -
Cec09g0234 875 Gene3D Phosphorylase Kinase; domain 1 485 599 - -
Cec09g0234 875 SUPERFAMILY Protein kinase-like (PK-like) 508 791 IPR011009 -
Cec09g0234 875 ProSiteProfiles Protein kinase domain profile. 524 796 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0234 875 FunFam receptor-like protein kinase FERONIA 488 599 - -
Cec09g0234 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0234 875 Gene3D - 228 414 - -
Cec09g0234 875 Gene3D - 53 207 - -
Cec09g0234 875 Pfam Protein tyrosine and serine/threonine kinase 529 788 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0234 875 ProSitePatterns Protein kinases ATP-binding region signature. 530 552 IPR017441 GO:0005524(InterPro)
Cec09g0234 875 MobiDBLite consensus disorder prediction 806 855 - -
Cec09g0234 875 Gene3D Transferase(Phosphotransferase) domain 1 600 821 - -
Cec09g0234 875 PANTHER OS07G0166700 PROTEIN 513 801 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0234 Cec-Chr9:2017553 Cec11g1886 Cec-Chr11:33090248 2.90E-225 dispersed
Cec04g1768 Cec-Chr4:36617656 Cec09g0234 Cec-Chr9:2017553 2.00E-64 transposed
Cec06g1798 Cec-Chr6:31457423 Cec09g0234 Cec-Chr9:2017553 8.30E-257 transposed
Cec11g0254 Cec-Chr11:2691823 Cec09g0234 Cec-Chr9:2017553 3.10E-62 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72240 PF12819 Malectin_like 8.00E-37 CL0202 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0234 - - - 0.0