Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0240 ATGCGAAGGGGATATAGTTTTGTGAGGAAAGGGAATCCGGTGCATTATCGGGCACCCACAAGTATTTGGGCGATGGGTCTGCAAATAACAGAGTCTAGAAATGGACTGGTCAACACTGGACCAACCGACGACGTGGGAGAGATGTGTGACGGAAACTACGGCGAGGGAGCGGCAAGTAGCAACATGAAAATGCAAAATGGATATGGTTTTGTCAAGAAAGGGAACAAAGGGCGGAGTGGAGTTGATGTTCTTGAAGATTTGGGGATGGATTTCATGTGTCGGAATGATGGGTTTTGTGGGGGTTTTTTAGCTGGGTGGTTTGGGGGTTTCATGATTGTGGAAATTTGGAGAAAGAAACCTTCAAATATGAGAAAAGAAGAAAATCATATCAGGGCTAATATTGGGGAATTCCCTGGTAGAATTACACGTGCTCGGGCTGCTGCATTTACTGCATCAGCACAGCTGCCTCCAAAAGTTCCTGCACATCATCAAGAGAGGCAGGTTGCCCGAGCTAATCTGAAAAGAGCTGCTTCTGAAGAAAATAGCTGCCATTCTATTGCTAAATCAGCTCGACCATGTAAAAGGAGGGCTGTGCTTCAGGATGTCAGCAATATAGGCTGTGAACCTTCGTACTCAAATTGTTTCAATGCAGCTAAAATTGAGCCCAATAGTAGTAAGCCGACAATCAGAAACCATCTCAAGAAGTCCAAAGGAGCCTCATCAGTTGGTGTGGCTAACTCCAAGGTTCCTCTAGGTCTTAGAACCAAAGGAGCTTCATCAGTTGGTGGGGCTTACTCCAAGCCTCTTGATCTTAGAACACAAGGTGTAGAATCAAATGTCAAATCAAAAGCCAAGTTGAAAGTTGAGCATTCAAGTAATTCTGAAGACCCCGATACACATCATCGGGTAAGTGGTATAAAGGAAGAGGTCACAAGTGATTTTCGGGATGATAATTGGAGGTCTCAAAGTCCTTCAGAGTCTCAAAATTTTCAAAATAAAGATAAAGTGTTGCTTCTGGGGACAAAAAGCAACCTGGACATTGCAGACATTGATTGTAATGACAGAGATGCTCAGCTGTGCACTGTCTATGCCCAGGATATCTATAACAATTTACGTGTAGCTGAGCTAACCAGAAGACCACGTCCCAATTTCATGGAAACAGTGCAGACTGATATTACCCAAAGCATGCGGGGTATATTGGTTGATTGGCTTGTAGAGGTGTCGGAGGAATACAAGTTAGTACCAGATACACTCTACCTAACTGTTTTTTTCATCGATTGGTTTCTCTCCCAAAATTACATCGAGAGACAAAGGCTTCAACTGTTGGGTATCTCTTGCATGTTAATTGCCTCGAAGTATGAAGAAATTTGTGCACCACGTGTTGAAGACTTTTGTTTCATCACTGACAGCACCTACACAAAAGAGGAGGTTCTGAATATGGAAGGTCAAATATTGAAGCATATGGGCTTTCAACTTTCTGCACCAACTGCAAAATCTTTCCTCAGGAGATATGTTCGAGCTGCACAAACGACATATAAGACCCCTAGTCTTGAACTCGAGTGCCTCGCCAACTATCTAGCTGAATTAACACTGGTTGACTACAGATTCCTGAATTGTCTTCCCTCAGTTATAGCTGCATCAGCTGTATTTCTTTCCAAATGGACGTTGGATCAGTCGAGTCACCCATGGAATTCAACACTGGAATATTATACCTCATATAAAGCATCAGATCTGAAACAAACTGTTGTTGCTTTACAAGATTTACAGTTGAACACCAACGGTTGTCCACTTAGTTCGATTCGTGTCAAGTATCGGCAAGAAAAGTTCAAAGCTGTTGCAACTTTGTCTTCCCCAAAATTACTTGATACGCTATTCTGA 1878 42.81 MRRGYSFVRKGNPVHYRAPTSIWAMGLQITESRNGLVNTGPTDDVGEMCDGNYGEGAASSNMKMQNGYGFVKKGNKGRSGVDVLEDLGMDFMCRNDGFCGGFLAGWFGGFMIVEIWRKKPSNMRKEENHIRANIGEFPGRITRARAAAFTASAQLPPKVPAHHQERQVARANLKRAASEENSCHSIAKSARPCKRRAVLQDVSNIGCEPSYSNCFNAAKIEPNSSKPTIRNHLKKSKGASSVGVANSKVPLGLRTKGASSVGGAYSKPLDLRTQGVESNVKSKAKLKVEHSSNSEDPDTHHRVSGIKEEVTSDFRDDNWRSQSPSESQNFQNKDKVLLLGTKSNLDIADIDCNDRDAQLCTVYAQDIYNNLRVAELTRRPRPNFMETVQTDITQSMRGILVDWLVEVSEEYKLVPDTLYLTVFFIDWFLSQNYIERQRLQLLGISCMLIASKYEEICAPRVEDFCFITDSTYTKEEVLNMEGQILKHMGFQLSAPTAKSFLRRYVRAAQTTYKTPSLELECLANYLAELTLVDYRFLNCLPSVIAASAVFLSKWTLDQSSHPWNSTLEYYTSYKASDLKQTVVALQDLQLNTNGCPLSSIRVKYRQEKFKAVATLSSPKLLDTLF 625
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2086511 2096958 + CePI673135_09g002400.1 Cec09g0240 210750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0240 625 MobiDBLite consensus disorder prediction 272 330 - -
Cec09g0240 625 SUPERFAMILY Cyclin-like 495 620 IPR036915 -
Cec09g0240 625 MobiDBLite consensus disorder prediction 222 242 - -
Cec09g0240 625 CDD CYCLIN_AtCycA_like_rpt1 356 491 - -
Cec09g0240 625 Gene3D - 380 493 - -
Cec09g0240 625 FunFam Cyclin A1 482 614 - -
Cec09g0240 625 SMART Cyclin_C_2 495 618 IPR004367 -
Cec09g0240 625 SUPERFAMILY Cyclin-like 356 492 IPR036915 -
Cec09g0240 625 PANTHER CYCLINS 346 605 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cec09g0240 625 Pfam Cyclin, C-terminal domain 495 617 IPR004367 -
Cec09g0240 625 FunFam Mitotic cyclin 6 380 480 - -
Cec09g0240 625 Pfam Cyclin, N-terminal domain 366 493 IPR006671 -
Cec09g0240 625 Gene3D - 366 614 - -
Cec09g0240 625 SMART cyclin_7 402 486 IPR013763 -
Cec09g0240 625 SMART cyclin_7 499 587 IPR013763 -
Cec09g0240 625 MobiDBLite consensus disorder prediction 282 320 - -
Cec09g0240 625 CDD CYCLIN_AtCycA-like_rpt2 495 609 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1888 Cec-Chr5:30937193 Cec09g0240 Cec-Chr9:2086511 6.40E-110 dispersed
Cec08g1681 Cec-Chr8:28093077 Cec09g0240 Cec-Chr9:2086511 3.60E-76 dispersed
Cec09g0240 Cec-Chr9:2086511 Cec11g1912 Cec-Chr11:33326601 7.20E-45 dispersed
Cec08g0619 Cec-Chr8:17738459 Cec09g0240 Cec-Chr9:2086511 1.50E-82 transposed
Cec08g1329 Cec-Chr8:25223519 Cec09g0240 Cec-Chr9:2086511 2.20E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0240 K06627 - csv:101222299 918.687