Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0320 ATGGGAGAGAGGTTAGGAGGTTATGCTATGAATCTTCTTGGTATTTTACTTCCCATGTGGGTTTTCTATTCCTTCTTCCCAATAATTGATGCCAGACCACACCTTGCTGGGTTTTCAATTTCTAGTACTGTTTTTGCTTCTCACACACATCCCATCTCTCTCATTGTTGCCAAAATGGAAGCTCAATCCCCAGGAGTTGCGGAGGTTAAAGTAGTTCACCACCAAGATTTGAACAAGAGAATTCTTATAGCATTGATTGTTTCTTCCACTCTTCTTGGAGTTATACTGCTGTTCCTTTTGTGTTTTTGGATATATCGTCGAAAAATGTCGAACCTTGATGATGGAAAATGTCAAAAGAATTTGGAGGCTACGAAAGGGATGCCGCTAAATCCCATCATATCCAGATTTAACTCCTTGAGGTTGGCTAACTTTAAAGGTTCGGTTTCCACCATCGACTATAAACTGTTGGAAGCAGCAACTGACAACTTCAGCAAAAGCAATGTTTTGGGTGAAGGCGGTACGGGACATGTTTACAAAGCTTGCTTCAATGATAAATTGCTGGCAGCTGTGAAGAAAATAGACAATGGAGGACCGGACGCTGAAAGAGAATTCGAGAATGAGGTGAATTGGTTGTGTAAAATACGACATCAAAACATAATCAAACTCTTGGGGCACTGCATTCATGGCGAGACACGGTTTCTCGTTTACGAGATGATGCAGAATGGATCTTTGGAGTCTCAGTTGCACGGACCATCTCACGGATCGGCTTTAACTTGGCATATCCGGATGAAGATTGCTGTTGATGTTGCAAGAGGCTTGGAATATCTTCACGAACATCGAAGTCCTCCTGTTGTTCATCGGGATTTGAAATCGTCAAATATCCTTTTAGATTCAGACTTTAATGCCAAGCTCTCTGACTTTGGCCTTACTGTAAACTTGGGAGCTCAAAATAAAAACATAAAGCTCTCAGGAACTTTGGGTTATGTCGCCCCAGAGTACCTTTTAGACGGTAAACTAACAGATAAAAGTGATGTCTATGCGTTCGGAGTTGTTCTTTTGGAGCTGCTGACCGGGAAGAAACCCGTTGAGAAGATGGGACCTACTCAATCCCAATCTCTAGTTTCATGGGCAATCCCGCAGCTCAGTGACAGATCAAAGCTACCGAAAATTGTCGATCCTGTGATAAGGGACACGATGGATTTGAAGCACTTATACCAAGTTGCTGCTGTAGCTGTTTTATGTGTACAATCAGAACCGAGTTACCGACCGTTAGTTACCGACGTTTTGCATTCCCTCATCCCTCTTGTACCTGTAGAGCTTGGAGGCTCTCTGAGAATTACAGAACCTCTGCATCCGAAAGTGCCTTCGTCGACCCTCTAA 1380 43.04 MGERLGGYAMNLLGILLPMWVFYSFFPIIDARPHLAGFSISSTVFASHTHPISLIVAKMEAQSPGVAEVKVVHHQDLNKRILIALIVSSTLLGVILLFLLCFWIYRRKMSNLDDGKCQKNLEATKGMPLNPIISRFNSLRLANFKGSVSTIDYKLLEAATDNFSKSNVLGEGGTGHVYKACFNDKLLAAVKKIDNGGPDAEREFENEVNWLCKIRHQNIIKLLGHCIHGETRFLVYEMMQNGSLESQLHGPSHGSALTWHIRMKIAVDVARGLEYLHEHRSPPVVHRDLKSSNILLDSDFNAKLSDFGLTVNLGAQNKNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLTGKKPVEKMGPTQSQSLVSWAIPQLSDRSKLPKIVDPVIRDTMDLKHLYQVAAVAVLCVQSEPSYRPLVTDVLHSLIPLVPVELGGSLRITEPLHPKVPSSTL 459
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2659065 2661654 + CePI673135_09g003200.1 Cec09g0320 210830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0320 459 Gene3D Transferase(Phosphotransferase) domain 1 239 437 - -
Cec09g0320 459 SMART serkin_6 163 433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0320 459 Pfam Protein tyrosine and serine/threonine kinase 166 374 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0320 459 ProSitePatterns Protein kinases ATP-binding region signature. 169 192 IPR017441 GO:0005524(InterPro)
Cec09g0320 459 FunFam probable receptor-like protein kinase At1g80640 239 437 - -
Cec09g0320 459 SUPERFAMILY Protein kinase-like (PK-like) 140 432 IPR011009 -
Cec09g0320 459 PANTHER OS01G0750732 PROTEIN 71 436 IPR050885 -
Cec09g0320 459 Gene3D Phosphorylase Kinase; domain 1 131 238 - -
Cec09g0320 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0320 459 ProSiteProfiles Protein kinase domain profile. 163 433 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0320 459 FunFam Protein kinase superfamily protein 130 238 - -
Cec09g0320 459 CDD STKc_IRAK 169 435 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1826 Cec-Chr5:30247056 Cec09g0320 Cec-Chr9:2659065 6.70E-25 dispersed
Cec07g0879 Cec-Chr7:21748197 Cec09g0320 Cec-Chr9:2659065 2.50E-30 dispersed
Cec09g0320 Cec-Chr9:2659065 Cec09g1058 Cec-Chr9:10293323 1.80E-69 dispersed
Cec09g0320 Cec-Chr9:2659065 Cec08g1399 Cec-Chr8:25803059 3.70E-139 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72242 PF00069 Pkinase 2.10E-47 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0320 - - - 0.0