Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0321 ATGGCCCGACCGCAACAGCGCTATCGTGGCGTTCGCCAACGACATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCTCTATTGAAGACGAGAATATGGTTAGGGACATTCGAGACGGCGGAGGATGCAGCCCGAGCTTACGACGAGGCAGCACGGCTGATGTGCGGTCCAAAGGCACGAACCAACTTCCAATATAATCCGAACGACCAACAGTCGTCGTCGTCGTCTTCTTCCTCCTCTCCGTCCAAGCTTCTCCCCGCCGCGCTGATAGCGAAATTACATAAATGCCATCTGGCCTCACTACAAATTGCGAAAAAACACGTCCACAGACAACACCCCGGATTCGAGCCCAACTACACCGCCTACGGCGGATCACCTCCACCGAGCATTGCCGGAACCACCGCAGGCCCGTCGACGCCGGAAGATACGTGGGTCTACTCCGACGAAGGTCAAATGGAGATGAATAACAACAATAATAATAACAACATTCATCATCAACAATGCCTTCAACCTCTTGAAGATGATGATATTGAACAAATGATACAAGAGCTGCTACATCTCGGACCATTCGAAATTATTACATAA 585 51.28 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPKARTNFQYNPNDQQSSSSSSSSSPSKLLPAALIAKLHKCHLASLQIAKKHVHRQHPGFEPNYTAYGGSPPPSIAGTTAGPSTPEDTWVYSDEGQMEMNNNNNNNNIHHQQCLQPLEDDDIEQMIQELLHLGPFEIIT 194
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2668535 2669334 - CePI673135_09g003210.1 Cec09g0321 210831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0321 194 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0321 194 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0321 194 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0321 194 Pfam AP2 domain 7 56 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0321 194 MobiDBLite consensus disorder prediction 61 81 - -
Cec09g0321 194 SMART rav1_2 7 70 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0321 194 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 7 177 - GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006950(PANTHER)|GO:0045893(PANTHER)
Cec09g0321 194 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677(InterPro)
Cec09g0321 194 MobiDBLite consensus disorder prediction 112 140 - -
Cec09g0321 194 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Cec09g0321 194 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Cec09g0321 194 CDD AP2 6 66 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1401 Cec-Chr8:25827623 Cec09g0321 Cec-Chr9:2668535 3.10E-41 dispersed
Cec08g1402 Cec-Chr8:25834895 Cec09g0321 Cec-Chr9:2668535 7.20E-45 dispersed
Cec09g0321 Cec-Chr9:2668535 Cec11g0313 Cec-Chr11:3367401 2.60E-25 dispersed
Cec09g0317 Cec-Chr9:2635823 Cec09g0321 Cec-Chr9:2668535 2.20E-15 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
30169 PF00847 AP2 8.30E-12 CL0081 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0321 - - - 0.0