Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0328 ATGCCGGTTGACGGTTCTTCAACTGCCGCCTCCACCCTATGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATCGTCAAACTCCTCCTCCAGAAAGGCTATATCGTAAAAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACCGCCATTTGAGAGAACTCGAAGGTGCGGCGGAGCGGCTCAGTTTGCATAAAGCGGATCTTCTCGATTTCGAAAGCCTCAGAGCGGCGATCGACGGCTGCGATGGCGTTTTCCACACTGCGTCGCCTGTGACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTTAACGGAACGAAGAACGTCATAATCGCGGCGGCCGAAGCCAATGTCCGTCGCGTGGTGTTCACTTCCTCGATTGGTGCAGTCTACATGGACCCCAACCGTGGTCCAGACGACATCGTCGACGAGTCCTGTTGGAGCGATCTCGAGTTCTGTAAGAACACAAAGAATTGGTATTGCTATGGAAAAGCTGTGGCGGAGCAAGCCGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGATTTGGTGGTGGTGAATCCAGTACTGGTGCTAGGGCCATTGTTGCAATCCACCATTAATGCGAGCATAATTCATATACTGAAGTACTTGACTGGATCAGCTAAGACGTATGCCAATTCCGTTCAGGCATATGTACACGTGAAGGATGTGGCTCTAGCTCATATCCTTGTGTACGAGACTCCCTCCGCCGCCGGCCGGTACCTCTGCGCCGAGAGTGTGCTTCACAGAGGGGAGGTTGTTGAGATTCTGGCCAAATTGTTCCCGGAATATCCTGTTCCTACCAAGTGCTCAGATGAAGTGAACCCGAGGAAGAAGGCATACAACTTCTCCAACAAGAAGCTGAAGGACTTGGGATTGGAGTTCACTCCAGCAAAGCAATGTTTATACGACACCGTTAAGAGCCTACAAGAGAAAGGTCATCTCCCAATTCCCACTTCTACTCAACCAGTTGACTCCATTCGAATTCAATCTTGA 1017 52.21 MPVDGSSTAASTLCVTGAGGFIASWIVKLLLQKGYIVKGTVRNPEDPKNRHLRELEGAAERLSLHKADLLDFESLRAAIDGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEANVRRVVFTSSIGAVYMDPNRGPDDIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQSTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYETPSAAGRYLCAESVLHRGEVVEILAKLFPEYPVPTKCSDEVNPRKKAYNFSNKKLKDLGLEFTPAKQCLYDTVKSLQEKGHLPIPTSTQPVDSIRIQS 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2728873 2735014 + CePI673135_09g003280.1 Cec09g0328 210838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0328 338 Pfam NAD dependent epimerase/dehydratase family 14 245 IPR001509 -
Cec09g0328 338 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 317 IPR036291 -
Cec09g0328 338 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 12 315 IPR050425 GO:0016616(PANTHER)
Cec09g0328 338 CDD FR_SDR_e 14 300 - -
Cec09g0328 338 FunFam Cinnamoyl-CoA reductase 1 4 335 - -
Cec09g0328 338 Gene3D - 4 337 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g2417 Cec-Chr2:41406558 Cec09g0328 Cec-Chr9:2728873 2.00E-83 dispersed
Cec02g2424 Cec-Chr2:41463611 Cec09g0328 Cec-Chr9:2728873 2.20E-77 dispersed
Cec09g0328 Cec-Chr9:2728873 Cec10g1308 Cec-Chr10:27307948 2.10E-147 dispersed
Cec09g0328 Cec-Chr9:2728873 Cec11g1947 Cec-Chr11:33555633 5.80E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0328 K09753 - csv:101213412 632.869