Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0335 ATGACATTGGAATCCTTTGTGACATTTCACAAAGGAGACGGCGTTTGCTTTGCATGCCTCACTTCGTCTCCAATTGCCCTCAAAATGTTTGTCGTCTCAAAGAGATTAGTACTCAAACAATTCAAGACTTGCACCACTTCTAAACAATCCGATTCAACGTCAATTGAGGACTCCAATCTTGGAAAATGGGGATATATCTCAGCTCCCCCAAAACAGAAAAGGCCTCAGATGATGGTGAGAATGAAAGACTTCGGTATGGCCTATCCTCTATGCAAGGGTGGCGTGCAACCATGGAAGATGCTCACTCCTTATAGTGTACTGGAACAGAGAGTTTGCATTAGAATATCTACAGTGCAATTGAAATTTGTAACTTGGCACTGGGTGGAGCAAAATCACTATTGTTTGGGATTGGAACCATTTTCTGAAGACTCTGAAATTGATCTACATTCTACACATTCTAAAAGTTGTGTTACATATGGATCCATTCTCACCCTACTTAAGTTTCAGCATGCAGCCTATCTAGATTTGGACACTTCAACATCTTTCTTTGGTGTTTATGATGGCCATGGAGGTAAAGCAGTTTCAAAGTTCTGTGCCAAGTTTCTTCACCGACAGGTGCTCAAGCATGAATCATACATGGCTGGAGATTTGGGAACTTCTCTGCAGAAGGCCTTTCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGATGGAGAGAATTAGCTATTTTAGGAGACAAAATGGACAAGATTTCTGGTATGATAGAAGGATTTATATGGTCGCCCAAGGGTAGTGAAGCTAACAACCAAGTGGATGATTGGCCTCCGGAGGAGGGACCTCACTCTGACTTTCATGGACCAAATGCTGGAAGCACAGCCTGTGTTGCAATCATACGAAATAACCAACTTGTGGTGGCAAATGCTGGTGATTCTCGCTGTGTCATTTCCAGAAAGGGTCAGGCATATAATCTATCCAAAGATCACAAGCCTGATCTTGAGGTTGAGAAGGACAGGATTCTGAAAGCCGGTGGTTTCATCCGAGTTGGTCGTGTCAATGGAAGTCTCAACTTGGCTCGGGCTATAGGAGACATGGAATTTAAGCAGAATAAAAGTATGCCTGCAGAAAAGCAGATTGTAACTGCCAATCCAGATGTGACAACTGTTGAGCTTTGTGAGGATGACGAGTTTCTTGTTATTGCCTGTGATGGGATCTGGGATTGCATGTCCAGCCAACAACTGGTTGACTACATTGGAGATCAACTAAAATCGGAAAGTAAACTCTCAGTCATTTGTGAGAGAGTATTTGACAGATGCTTGGCACCCACAGCTGGTGGTGAAGGATGTGACAACATGACTATGATCTTGGTTCAGTTTAAGAAACCCTTCAACAACCCAAATGCTGTTTCTACTTCTGCTGAGGAGCTGCCTTCATCGTCCAATCAAACGTTGTCTGGTCCGAATGAAGGCTCTTCGAAGACTTAA 1482 43.32 MTLESFVTFHKGDGVCFACLTSSPIALKMFVVSKRLVLKQFKTCTTSKQSDSTSIEDSNLGKWGYISAPPKQKRPQMMVRMKDFGMAYPLCKGGVQPWKMLTPYSVLEQRVCIRISTVQLKFVTWHWVEQNHYCLGLEPFSEDSEIDLHSTHSKSCVTYGSILTLLKFQHAAYLDLDTSTSFFGVYDGHGGKAVSKFCAKFLHRQVLKHESYMAGDLGTSLQKAFLRMDEMMRGQRGWRELAILGDKMDKISGMIEGFIWSPKGSEANNQVDDWPPEEGPHSDFHGPNAGSTACVAIIRNNQLVVANAGDSRCVISRKGQAYNLSKDHKPDLEVEKDRILKAGGFIRVGRVNGSLNLARAIGDMEFKQNKSMPAEKQIVTANPDVTTVELCEDDEFLVIACDGIWDCMSSQQLVDYIGDQLKSESKLSVICERVFDRCLAPTAGGEGCDNMTMILVQFKKPFNNPNAVSTSAEELPSSSNQTLSGPNEGSSKT 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2781364 2789262 - CePI673135_09g003350.1 Cec09g0335 210845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0335 493 ProSitePatterns PPM-type phosphatase domain signature. 182 190 IPR000222 GO:0043169(InterPro)
Cec09g0335 493 Gene3D - 167 459 IPR036457 -
Cec09g0335 493 SMART PP2C_SIG_2 162 458 IPR001932 -
Cec09g0335 493 SMART PP2C_4 154 456 IPR001932 -
Cec09g0335 493 MobiDBLite consensus disorder prediction 467 493 - -
Cec09g0335 493 Pfam Protein phosphatase 2C 287 443 IPR001932 -
Cec09g0335 493 Pfam Protein phosphatase 2C 175 234 IPR001932 -
Cec09g0335 493 SUPERFAMILY PP2C-like 173 460 IPR036457 -
Cec09g0335 493 CDD PP2Cc 169 458 IPR001932 -
Cec09g0335 493 PANTHER PROTEIN PHOSPHATASE 2C 148 459 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cec09g0335 493 ProSiteProfiles PPM-type phosphatase domain profile. 151 458 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g1791 Cec-Chr5:29790386 Cec09g0335 Cec-Chr9:2781364 6.70E-140 dispersed
Cec09g0335 Cec-Chr9:2781364 Cec11g1929 Cec-Chr11:33458689 3.90E-30 dispersed
Cec09g0335 Cec-Chr9:2781364 Cec09g0479 Cec-Chr9:4063707 1.80E-30 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0335 K17499 - csv:101214132 630.557