Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0358 ATGGCCCTTGAATCAAAGCAAACTAATGAGTTCATTTTCCGTTCAAAGCTTCCCGATATTTACATTCCCAATCATCTTCCACTCCACCATTACGTTTTCCAAAATCTCCCAAAATTCGCCTCACGCCCCTGTTTGATCAACTCCGCCACCGGCGATGTTTACTCCTTCCACGACGTTCACCTAACGGCCCGTCGTGTCGCCGCCGGCTTACACAACCACGGAATTAAAAAGGGCGATGTCGTCATGAATTTACTTCCCAACTCCCCGGAGTTCGTCTTCACCTTCCTCGCCGCGTCGTACCGAGGCGCCATCATGACGGCGGCGAACCCTTTTTACACGGCCGTGGAAATCGCCAAACAGGTCAAAGCCGCCAATGCGAAATTGATCGTGACGATGGCGTGCTTTTACGATCGGGTTAAGGATTTGGCTGAAAATGGTGTGAAAATTGTATGCGTTGATTTTGCTGTTGAGGGTTGTTTGCATTTCTCTGTGTTGAGTGGGGCTGATGAATCTCACGCGCCGCCGGTGGATTTTTCCCCCGACGACGTGGTGGCGCTGCCGTACTCCTCCGGCACCACCGGTTTGCCGAAGGGTGTTATGTTAACTCATAAAGGGTTAATCACAAGCGTGGCTCAACAAATGGACGGCCAAAATCCAAACCTCTACTATCATCGCGATGACGTCATCCTCTGTGTGCTGCCGTTTTTCCACATCTATTCACTCAATTCCATTTTGCTGTGCGGGCTACGCGCCGGTGCTGCAATTATGATTATGCAGAAATTTGAGATAATTTCACTTTTACAATTGATTGAGAAATACAAAATTTCGATCATGCCCATCGTGCCGCCGATCTTACTGGCCATTGCTAAGTCGTCGGAATTTGAGAAATACGACGTGTCGTCCGTGAGGGTTATAAAATCCGGCGGAGCGCCACTGGGGAAGGAGTTGGAAGACGCCGTGAGGGCGAAATTTCCGGCGGCGATTCTTGGGCAAGGGTACGGAATGACCGAGGCCGGTCCGGTTCTGACAATGAGTCTGGCTTTTGCGAAAGAGCCGTTTGAAGTGAAAGCCGGAGCATGTGGAACTGTGGTTCGAAATGCAGAGATGAAGATTGTTGACCCGGAAACCGGCGCGTCCTTGCCGGCGAATTCGGCCGGAGAGATTTGTATTAGGGGTGATCAAATCATGAAGGGATATTTGAATGATTTGGAGTCTACGAAGAGAACAATTGATAAAGAAGGATGGCTTCACACCGGCGACATGGGCTACATCGACGACGACGACGAGCTCTTCATCGTGGACCGGCTTAAGGAACTTATCAAATTCAAGGCATTTCAAGTGGCGCCTGCGGAGGTGGAGGCCCTTCTTATCAGTCATCCTAAACTCTGTGACGCTGCGGTTATTGGGATGCCGGACGTGGAGGCGGGAGAAGTGCCGGTGGCATTTGTTGTGAAGGAGAACAGTGAGGCAATAACAGAAGAAGATGTAAAGCAATTCATAACAAAACAAGTGGTGTTCTACAAGAGGCTAAAACGTGTGTTTTTTGTCAACGCTATTCCGAAGGCGCCATCTGGCAAAATCCTTAGAAAAGAACTCAGAGCAAAACTTACTTATGCTGCTTACAATTAA 1629 49.29 MALESKQTNEFIFRSKLPDIYIPNHLPLHHYVFQNLPKFASRPCLINSATGDVYSFHDVHLTARRVAAGLHNHGIKKGDVVMNLLPNSPEFVFTFLAASYRGAIMTAANPFYTAVEIAKQVKAANAKLIVTMACFYDRVKDLAENGVKIVCVDFAVEGCLHFSVLSGADESHAPPVDFSPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQMDGQNPNLYYHRDDVILCVLPFFHIYSLNSILLCGLRAGAAIMIMQKFEIISLLQLIEKYKISIMPIVPPILLAIAKSSEFEKYDVSSVRVIKSGGAPLGKELEDAVRAKFPAAILGQGYGMTEAGPVLTMSLAFAKEPFEVKAGACGTVVRNAEMKIVDPETGASLPANSAGEICIRGDQIMKGYLNDLESTKRTIDKEGWLHTGDMGYIDDDDELFIVDRLKELIKFKAFQVAPAEVEALLISHPKLCDAAVIGMPDVEAGEVPVAFVVKENSEAITEEDVKQFITKQVVFYKRLKRVFFVNAIPKAPSGKILRKELRAKLTYAAYN 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3002180 3003808 + CePI673135_09g003580.1 Cec09g0358 210868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0358 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 14 437 - -
Cec09g0358 542 Gene3D - 3 436 IPR042099 -
Cec09g0358 542 CDD 4CL 22 532 - -
Cec09g0358 542 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Cec09g0358 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 533 - GO:0016405(PANTHER)
Cec09g0358 542 Gene3D - 437 539 IPR045851 -
Cec09g0358 542 FunFam 4-coumarate--CoA ligase 2 438 539 - -
Cec09g0358 542 Pfam AMP-binding enzyme 37 400 IPR000873 -
Cec09g0358 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
Cec09g0358 542 SUPERFAMILY Acetyl-CoA synthetase-like 10 536 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0356 Cec-Chr9:2985409 Cec09g0358 Cec-Chr9:3002180 3.50E-290 dispersed
Cec09g0358 Cec-Chr9:3002180 Cec10g1289 Cec-Chr10:27002219 2.80E-223 dispersed
Cec09g0357 Cec-Chr9:2991505 Cec09g0358 Cec-Chr9:3002180 5.10E-289 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0358 K01904 - csv:101218361 977.622