Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0378 | ATGGAGCTTGGCCTGAGCTTGGGCGACGCCCCCAAGCCCTTCCGCTTCGTCGAGAAGCAACCGCAAGAACCGCCGCCACAGCGAGTTCTTTCCCGGCCAGATTTAGGGTTCTGTGTCGACTTGTCGATTGGCCGTCCGGTTGTCGGAGAGAAAGAGGACGACGAAGAAAAACCTAATCAGAGAGAAGATGAATCCGACGCTAATGAAGATCCACCGATTCAACTCGATCTTCTCCCTCATAATCCTGTTCCTCGAAACCTAACTAATCCGTACCAAGGATTCCCATGGCCGTCGTCCGAAAACGATGAAGGCGAAGACCGAACCGCATCTCCGAACAGCGCAGCGTCGTCGTTTCAGATGGAATTTGGACTGTACGGCGGCGGAGGAAATATTTCCTGCCGGAGAGATCAAATTGAAAATGGCGTAATGAACGAAGTAGGTGAATCTGGAAGAGCGTCTTCTAGAGCTAGCGATGAAGACGAAAATGGCTGTACGAGGAAGAAACTCAGACTCTCTAAAGAACAATCCGCTTTCCTTGAAGAAAGCTTCAAAGAACACAACACTTTAAACCCTAAACAGAAGCTAGCACTGGCTAAGCAACTGAATCTTCTTCCTCGCCAAGTGGAAGTTTGGTTCCAAAACAGAAGGGCTAGGACGAAATTGAAGCAAACGGAAGTGGATTGCGAGTATTTGAAAAGATGTTGTGAGACATTAACAGAAGAGAACAGACGGCTTCAAAAGGAGCTTCAAGAATTAAGAGCTTTGAAAACAACGAACTCATTCTACATGCAATTACCAGCCACCACACTCACCATGTGTCCTTCTTGTGAAAGAGTAACCTCAACTTCCGCCGCTTCCACCGTCGCTGCCGTCGCCACCAGTGGAGGCAAATCGACGGAGGGAGTTTCAAAACGTTCTGGGTTCGCCATTGCTGGCCGACCCAGTTCTTCCTCTTTCCCATTTTCTGCTAAAACGCAGTCCCACCAGTCAACAGCTTCATGA | 1002 | 49.0 | MELGLSLGDAPKPFRFVEKQPQEPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQREDESDANEDPPIQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQMEFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLEESFKEHNTLNPKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAIAGRPSSSSFPFSAKTQSHQSTAS | 333 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 3241315 | 3242561 | + | CePI673135_09g003780.1 | Cec09g0378 | 210888 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0378 | 333 | SMART | halz | 222 | 265 | IPR003106 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec09g0378 | 333 | ProSiteProfiles | 'Homeobox' domain profile. | 162 | 222 | IPR001356 | GO:0003677(InterPro) | |
Cec09g0378 | 333 | Gene3D | - | 170 | 220 | - | - | |
Cec09g0378 | 333 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 56 | 290 | IPR050762 | - | |
Cec09g0378 | 333 | MobiDBLite | consensus disorder prediction | 292 | 333 | - | - | |
Cec09g0378 | 333 | CDD | homeodomain | 166 | 223 | IPR001356 | GO:0003677(InterPro) | |
Cec09g0378 | 333 | SUPERFAMILY | Homeodomain-like | 159 | 223 | IPR009057 | - | |
Cec09g0378 | 333 | Pfam | Homeobox associated leucine zipper | 222 | 256 | IPR003106 | GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cec09g0378 | 333 | MobiDBLite | consensus disorder prediction | 146 | 165 | - | - | |
Cec09g0378 | 333 | ProSitePatterns | 'Homeobox' domain signature. | 197 | 220 | IPR017970 | GO:0000981(InterPro)|GO:0006355(InterPro) | |
Cec09g0378 | 333 | SMART | HOX_1 | 164 | 226 | IPR001356 | GO:0003677(InterPro) | |
Cec09g0378 | 333 | MobiDBLite | consensus disorder prediction | 46 | 68 | - | - | |
Cec09g0378 | 333 | MobiDBLite | consensus disorder prediction | 1 | 113 | - | - | |
Cec09g0378 | 333 | MobiDBLite | consensus disorder prediction | 310 | 333 | - | - | |
Cec09g0378 | 333 | FunFam | Homeobox-leucine zipper protein HAT22 | 170 | 216 | - | - | |
Cec09g0378 | 333 | Coils | Coil | 228 | 258 | - | - | |
Cec09g0378 | 333 | Pfam | Homeodomain | 166 | 220 | IPR001356 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec09g0378 | Cec-Chr9:3241315 | Cec10g1968 | Cec-Chr10:34472096 | 6.60E-13 | dispersed | |
Cec01g0608 | Cec-Chr1:6506797 | Cec09g0378 | Cec-Chr9:3241315 | 1.80E-35 | transposed | |
Cec04g1485 | Cec-Chr4:34408287 | Cec09g0378 | Cec-Chr9:3241315 | 1.00E-53 | transposed | |
Cec05g0047 | Cec-Chr5:542726 | Cec09g0378 | Cec-Chr9:3241315 | 2.80E-47 | transposed | |
Cec05g1944 | Cec-Chr5:31498779 | Cec09g0378 | Cec-Chr9:3241315 | 2.00E-41 | transposed | |
Cec06g1591 | Cec-Chr6:29489667 | Cec09g0378 | Cec-Chr9:3241315 | 4.70E-41 | transposed | |
Cec07g0721 | Cec-Chr7:13812448 | Cec09g0378 | Cec-Chr9:3241315 | 1.00E-34 | transposed | |
Cec10g0249 | Cec-Chr10:2766106 | Cec09g0378 | Cec-Chr9:3241315 | 1.30E-51 | transposed | |
Cec10g0842 | Cec-Chr10:16896854 | Cec09g0378 | Cec-Chr9:3241315 | 3.00E-51 | transposed | |
Cec10g1276 | Cec-Chr10:26893655 | Cec09g0378 | Cec-Chr9:3241315 | 1.70E-46 | transposed | |
Cec10g1777 | Cec-Chr10:32503119 | Cec09g0378 | Cec-Chr9:3241315 | 9.40E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
30174 | PF00046 | Homeodomain | 4.90E-15 | CL0123 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0378 | K09338 | - | csv:101221600 | 577.4 |