Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0413 ATGTGGAGACCATGTTGGGAAGACCGTCGAGGACCATGCTATGAGTACGAGAGAAAAGATGGCAATCAGTCTTGTCCTCAATGCAAAAGCAGATACAAGAGGCACAAAGGAAGTCCTGCTGTTCTTGGTGATGAAGAGGCTGCTGAGCTTGATGACGATGATGATGCGAATGATTTAAATTACATTTCTGAAAGCCAAAAAGAGAAGCAGAAGATTGTGGAGCGAATGATGAGCTGGCAGGTGTCATATGGGCAAGCACAAGATCTCCCACCTCCGAATTATGACAAAGAAGTTTCTTTAAATCACATTCCATTGCTCACCAATGGGCAGGAGGTTTCTGGAGAACTTTCAGCTGCATCACCCGAGTATCATTTGATGGCATCTCCTGGACATCCTCGTGGGAAGCCGATATATTCTCTTCCTTATGCAGCTGATATTAACCAATCACCTAACGTGCGAGGTGTGGACCCTACAAGAGAGTATAATTTGTCGGGACTAGGCAATGTAGCTTGGAAGGAGAGAGTTGATGGCTGGAAGATGAAACAGGAGAAGAATGCGGGACCAATGAGCATAGCCCATGCTGCATCTGAAAGGGGAGGTGGAGATATTGATGCCTGCACAGATGTGCTTGTTGACGACTCCTTACTAAATGACGAAGCTCGCCAGCCTCTTTCACGAAAGGTTTCTATTCCATCATCTAGGATAAACCCGTACCGAATGGTGATTGTTCTGCGGCTTGTAATTCTTTGTTTTTTCTTGCACTACCGAATCACAAATCCAGTACGCAATGCATATGCTCTATGGCTGATATCTGTTATATGTGAGATTTGGTTTGCAATATCCTGGATATTAGATCAGTTCCCGAAGTGGCTTCCTGTAAACCGTGAGACATATCTAGATCGACTTGCATTAAGATATGATAGGGAAGGGGAACCATCACAGCTTGCTGCTGTTGACATTTTTGTGAGTACTGTCGACCCACTGAAGGAGCCTCCACTTGTCACAGCCAACACCGTACTATCTATTCTTGCTGTTGACTACCCGGTTGACAAGGTCTCGTGCTATGTTTCTGATGATGGAGCTGCCATGTTGACATTTGAAGCATTATCCGAAACATCAGAGTTTGCAAGGTCATGGGTGCCTTTCTGCAAGAAACACAGCATTGAGCCTCGGGCTCCAGAATGGTACTTCGCTCAGAAAATTGATTACTTGAAGGATAAAGTCGATCCATCATTTGTCAAAGATCGAAGAGCAATGAAGAGAGAATACGAGGAATTTAAGGTCCGCATCAACGGCTTGGTATCAAAGGCACAAAAGATTCCCGAAGAAGGATGGGTCATGCAAGATGGAACTCCGTGGCCTGGAAATAATACTAGAGACCATCCAGGAATGATCCAGGTTTTCCTAGGCCAAAACGGTGGACTGGATTCCGATGGTAATGAGTTGCCTCGTTTAGTCTATGTATCTCGTGAAAAACGTCCAGGATTCCAACATCATAAGAAAGCTGGTGCAATGAATGCACTTGTTCGAGTGTCTGCTGTTCTTACCAATGGCCCATTCTTGTTAAATCTTGACTGTGATCACTACATAAACAACAGCAAGGCATTAAGGGAAGCAATGTGTTTCATGATGGATCCAAACCTTGGCAAATACGTCTGTTATGTTCAGTTTCCTCAAAGATTTGACGGTATTGATAAGAACGATCGATATGCCAACCGTAATACTGTGTTCTTTGATATAAATTTAAGAGGTTTAGATGGCCTTCAAGGTCCAGTTTATGTGGGTACTGGATGTGTCTTCAACAGAACTGCACTGTATGGTTATGAACCTCCTCACAAACCAAAGCATCGGAAAACAGGATTTCTGTCTTCACTCTGTGGTGGATCTCGAAAGAAGAATTCAAAATCCAGCAAAAAAAGTCCAGACAAGAAGAAATCAAGCAGGCACGTGGACCCGACAGTGCCAATTTTCAATCTCGACGACATTGAAGAAGTGGTTGAAGGTGCTGGATTTGATGATGAGAAGTCCTTGTTAATGTCACAAATGACCCTGGAGCAAAGGTTTGGCCAGTCCTCTGTTTTTGTTGCCTCAACCCTTATGGAAAATGGCGGCGTTCCTCAATCGGCAACGCCCGAGTCTCTTCTAAAGGAGGCTATTCATGTTATCAGCTGTGGATATGAAGACAAAACAGACTGGGGATCCGAGATTGGATGGATTTATGGCTCTGTCACTGAAGATATTCTTACAGGATTCAAGATGCATGCCCGTGGTTGGCGGTCAATTTATTGTATGCCACAACGTCCTGCTTTTAAAGGGTCTGCGCCTATTAATCTTTCAGATCGATTAAACCAAGTGCTTCGATGGGCCCTCGGTTCGGTGGAGATTCTTCTGAGTAGGCATTGCCCTATCTGGTATGGCTATGGTGGAAGGCTCAAATGGCTCGAAAGGTTCGCATATGTGAATACTACGATCTATCCGATCACTGCAGTTCCTCTTCTCATGTATTGTACCTTGCCAGCTGTGTGTCTGCTGACGAACAAGTTCATCATTCCCCAGATAAGTAACGTTGCAAGTATATGGTTTATAGCCCTCTTTCTCTCCATCTTTGCGACGGGCATTCTCGAGATGAGATGGAGCGGGGTTGGGATCGACGAGTGGTGGAGAAACGAACAATTTTGGGTCATTGGAGGTGTTTCAGCTCACCTGTTTGCTGTTTTCCAAGGTCTGCTCAAGGTTCTTGCCGGTATCGACACCAACTTTACGGTCACATCCAAGGCGTCTGACGAAGACGGGGACTATACTGAGCTTTACATGTTCAAATGGACGACTCTTCTCATCCCACCAACTACACTCCTCATCGTAAACTTGGTAGGGGTCGTAGCGGGAATATCTTACGCAATCAACAGTGGATACCAATCATGGGGACCACTGTTTGGCAAGCTATTTTTCGCTTTCTGGGTGATCATTCATCTCTATCCATTCTTGAAAGGTTTGATGGGTCGCCAAAATAGAACACCCACCATTGTCGTCGTGTGGTCGATTCTGCTTGCTTCCATCTTCTCGTTGTTATGGGTGAGGATCGATCCATTCACTACAACAGTCATAGGGCCCGACGTCGAGGAGTGTGGAATCAACTGCTAG 3141 45.14 MWRPCWEDRRGPCYEYERKDGNQSCPQCKSRYKRHKGSPAVLGDEEAAELDDDDDANDLNYISESQKEKQKIVERMMSWQVSYGQAQDLPPPNYDKEVSLNHIPLLTNGQEVSGELSAASPEYHLMASPGHPRGKPIYSLPYAADINQSPNVRGVDPTREYNLSGLGNVAWKERVDGWKMKQEKNAGPMSIAHAASERGGGDIDACTDVLVDDSLLNDEARQPLSRKVSIPSSRINPYRMVIVLRLVILCFFLHYRITNPVRNAYALWLISVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEFARSWVPFCKKHSIEPRAPEWYFAQKIDYLKDKVDPSFVKDRRAMKREYEEFKVRINGLVSKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQNGGLDSDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKYVCYVQFPQRFDGIDKNDRYANRNTVFFDINLRGLDGLQGPVYVGTGCVFNRTALYGYEPPHKPKHRKTGFLSSLCGGSRKKNSKSSKKSPDKKKSSRHVDPTVPIFNLDDIEEVVEGAGFDDEKSLLMSQMTLEQRFGQSSVFVASTLMENGGVPQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPQRPAFKGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAVPLLMYCTLPAVCLLTNKFIIPQISNVASIWFIALFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDYTELYMFKWTTLLIPPTTLLIVNLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTTVIGPDVEECGINC 1046
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3557472 3563115 + CePI673135_09g004130.1 Cec09g0413 210923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0413 1046 Pfam Cellulose synthase 318 1038 IPR005150 GO:0016020(InterPro)|GO:0016760(InterPro)|GO:0030244(InterPro)
Cec09g0413 1046 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 8 57 IPR013083 -
Cec09g0413 1046 SUPERFAMILY RING/U-box 12 53 - -
Cec09g0413 1046 Pfam Zinc-binding RING-finger 12 47 IPR027934 -
Cec09g0413 1046 MobiDBLite consensus disorder prediction 18 56 - -
Cec09g0413 1046 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 226 1015 - GO:0005802(PANTHER)|GO:0005886(PANTHER)|GO:0009833(PANTHER)|GO:0016759(PANTHER)|GO:0030244(PANTHER)
Cec09g0413 1046 FunFam Cellulose synthase 435 609 - -
Cec09g0413 1046 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 460 609 IPR029044 -
Cec09g0413 1046 MobiDBLite consensus disorder prediction 611 652 - -
Cec09g0413 1046 SUPERFAMILY Nucleotide-diphospho-sugar transferases 332 868 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec04g0441 Cec-Chr4:16789214 Cec09g0413 Cec-Chr9:3557472 0.00E+00 dispersed
Cec05g1873 Cec-Chr5:30813499 Cec09g0413 Cec-Chr9:3557472 0.00E+00 dispersed
Cec09g0413 Cec-Chr9:3557472 Cec11g1171 Cec-Chr11:24017616 0.00E+00 dispersed
Cec09g0413 Cec-Chr9:3557472 Cec02g0927 Cec-Chr2:12228845 1.90E-114 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0413 K10999 - csv:101206590 2035.0