Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0460 ATGCGTATTACAAAGGAAGTAGGAAGCTTTGAGGACTTGTTTCCGTTCTACGAAGTTGATCGGAACATTGAGGACTTGTTTCCGTCGAATTTGATATCTGATCGACGTTGGCGCATCCATGGTATCCAGAAGGCTGCTGATAGCAGCAGCATGTACCAAGTAAAAGCTTCAGCAGGAACTGATGAAGGCTATCACAAACGGCAAACTGCACCTAAAAGTCCTCCAATAGTGAAAATGCGGCCCATTGAAGTCCCTGCCATATCATTTGAGGAACTGAAGGAGGTTACGAAAAATTTCGATGCTGACTGTTTGATTGGAGAGGGTTCCTACGGTAGAGTATACTATGGGGTATTTACAAGTGGGCAGACTGTGGGAATCAAAAAGTTGGATGCCAGCAAACAATCGGATGATGAATTCTTATCCCAGGTCTCCATGGTTTCAAGTCTAAAGCACAATAATTTTCTAAACTTGATTGGGTACTGTGTTGATGGCAATTCTCGAATTCTTGCATACGAGTATGCTTCAAATGGATCTCTTCACGACATTTTACACGGGAGGAAAGGAGTCAAAGGAGCACAACCCGGCCCTGTTCTTTCCTGGGCACAGAGAGTAAAAATTGCTGTAGGTGCTGCAAAGGGTTTGGAGTATTTGCATGAAAAGGTCGATCCTCATATCATCCATCGGGACATAAAATCCAGCAACGTACTAATATTTGATGATGATTTGGCAAAAATTGCTGACTTTGATTTGTCAAACCAAGCCCCTGATATGGCTGCACGGCTTCATTCCACCCGTGTTCTTGGAACCTTTGGCTATCATGCTCCTGAATACGCAATGACTGGACAATTGAATGCCAAGAGTGATGTGTACAGCTTTGGTGTTGTCCTGCTTGAACTTTTGACAGGAAGAAAGCCAGTTGATCATACATTGCCTCGAGGACAGCAAAGCCTCGTGACATGGGCCACGCCCAAACTTTGCGAGGATAAAGTTAAGCAATGTGTTGATGCAAAACTAGGAGATGAGTACCCTCCAAAGGCAGTTGCAAAGTTTGCAGCGGTTGCTGCATTGTGCGTTCAATATGAAGCAGATTTCAGACCAAACATGAGCATTGTGGTCAAAGCCCTGCAGCCTCTGTTAAATGTCCGACCTGGTCCTGGCGGTGAAGCACCAACTCTTTAA 1179 44.7 MRITKEVGSFEDLFPFYEVDRNIEDLFPSNLISDRRWRIHGIQKAADSSSMYQVKASAGTDEGYHKRQTAPKSPPIVKMRPIEVPAISFEELKEVTKNFDADCLIGEGSYGRVYYGVFTSGQTVGIKKLDASKQSDDEFLSQVSMVSSLKHNNFLNLIGYCVDGNSRILAYEYASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAAKGLEYLHEKVDPHIIHRDIKSSNVLIFDDDLAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLCEDKVKQCVDAKLGDEYPPKAVAKFAAVAALCVQYEADFRPNMSIVVKALQPLLNVRPGPGGEAPTL 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3947058 3951966 - CePI673135_09g004600.1 Cec09g0460 210970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0460 392 Gene3D Transferase(Phosphotransferase) domain 1 174 382 - -
Cec09g0460 392 SUPERFAMILY Protein kinase-like (PK-like) 74 375 IPR011009 -
Cec09g0460 392 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0460 392 FunFam pto-interacting protein 1 175 386 - -
Cec09g0460 392 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 57 380 IPR052101 -
Cec09g0460 392 Gene3D Phosphorylase Kinase; domain 1 60 173 - -
Cec09g0460 392 SMART serkin_6 99 379 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec09g0460 392 Pfam Protein tyrosine and serine/threonine kinase 104 375 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec09g0460 392 ProSiteProfiles Protein kinase domain profile. 99 379 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0460 Cec-Chr9:3947058 Cec10g1782 Cec-Chr10:32547599 4.10E-131 dispersed
Cec07g1703 Cec-Chr7:32612945 Cec09g0460 Cec-Chr9:3947058 1.00E-137 transposed
Cec10g1189 Cec-Chr10:25952497 Cec09g0460 Cec-Chr9:3947058 4.90E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72246 PF07714 PK_Tyr_Ser-Thr 1.10E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0460 K13436 - csv:101215263 653.284