Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0479 ATGAAAGAAAAGACGTTCCCAAACCCAATCGCAATTGCAATTCCAATTCAAATTCCGACTTGCCCTTCTTCTGATTATAACGATTTTGATCTCTCTGTTGAAGAATCTGATTCTTTGGTAAATGTAAAAATGGTGGCTGAAGCTGAGGTTGTTGTTTGTTCGAAGAGCCTCCCGGTTTTGGAGGTCCCGTATTTCGGTAAAGAGACTCATCTTGTGGATGAAATTGAGTCCATCGATGGTGGGATTTCGATTGATCCGACTCTCAATCGTGTTCGTGCTTCCGAATCTGTTTGTTCCAGTTCTCAATCGGATATTAAACCCATGAAGAAAATTCCAGATTCCGACGTCGATACGGAGAACGGAAGGGAATTTCCGAGCCTCCGGTCGGGGAGCTTTGCTGATATTGGCCCTAGGAGATGCATGGAAGATGAACATATAAGGATAGATGATTTGTCTTCACATTTAGGATCGCTCTTTAAGTTTCCCAAGCCAAGTGCTTTCTATGGGGTATTCGATGGACATGGAGGTCCTGAAGCAGCAGCTTATATCAGAAAGAATGTTCTTAGACTCTTTTTTGAGGATGTTAGTTTTCCTCAAATTCCAGATATTGGTGAAGTCTTGCCGGAGGAGATAGAAAATTGTCTCCGACAAGCATTTCTTCTAGCTGATCGAGCTCTGGCTGATGATTCCAGTGTCAGTAGTTCATCCGGGACAACGGCCCTGACAGCTCTTGTGCTTGGAAGGCATTTAATGGTGGCGAATGCTGGAGATTGCCGAGCTGTTCTCAGCCGGAATGGGGAGGCAGTAGATATGTCTCAAGACCACCGGCCAGTTTATTCTCCAGAGAAGCAACGGGTAGAAGAGTTGGGTGGCTTTGTTGATGGTGGCTATCTCAACGGCGTTTTATCGGTTTCCAGGGCTTTGGGGGATTGGGACATGAAGCTCCCTGATGGTTCTCCTTCGCCTCTCATTGCAGAACCAGAATGCAGGCAGGCGGTACTTACAGAAGAGGATGAGTTCTTGATCATAGCCTGTGATGGGATTTGGGACGTGATGTCGAGCCAACAAGCAGTCAATGTAGTTCGACAAGGGCTTCAACGTCACGATGACCCTGAGCGGTGTGCTCGAGACCTTGTCCTTCAGGCTTTGCGACTAGACTCATTCGACAACCTCACTGTTGTTGTTGTTTGCTTCTCCAGTTTCCATCCTGGCAATTCTCCACGACCACAGCAGCGGAACTTTAGATACTGCAGTCTCTCTGCACAGGCTCTTTGTAGCTTGCAAAGATGGCTGGATAACAGTGGATGCCAATGA 1314 46.8 MKEKTFPNPIAIAIPIQIPTCPSSDYNDFDLSVEESDSLVNVKMVAEAEVVVCSKSLPVLEVPYFGKETHLVDEIESIDGGISIDPTLNRVRASESVCSSSQSDIKPMKKIPDSDVDTENGREFPSLRSGSFADIGPRRCMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVSFPQIPDIGEVLPEEIENCLRQAFLLADRALADDSSVSSSSGTTALTALVLGRHLMVANAGDCRAVLSRNGEAVDMSQDHRPVYSPEKQRVEELGGFVDGGYLNGVLSVSRALGDWDMKLPDGSPSPLIAEPECRQAVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARDLVLQALRLDSFDNLTVVVVCFSSFHPGNSPRPQQRNFRYCSLSAQALCSLQRWLDNSGCQ 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4063707 4066025 - CePI673135_09g004790.1 Cec09g0479 210989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0479 437 MobiDBLite consensus disorder prediction 108 122 - -
Cec09g0479 437 Pfam Protein phosphatase 2C 138 390 IPR001932 -
Cec09g0479 437 Gene3D - 108 402 IPR036457 -
Cec09g0479 437 PANTHER PROTEIN PHOSPHATASE 2C 103 398 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Cec09g0479 437 SMART PP2C_4 118 396 IPR001932 -
Cec09g0479 437 ProSiteProfiles PPM-type phosphatase domain profile. 128 398 IPR001932 -
Cec09g0479 437 FunFam Probable protein phosphatase 2C 22 113 401 - -
Cec09g0479 437 SUPERFAMILY PP2C-like 123 400 IPR036457 -
Cec09g0479 437 CDD PP2Cc 128 398 IPR001932 -
Cec09g0479 437 ProSitePatterns PPM-type phosphatase domain signature. 167 175 IPR000222 GO:0043169(InterPro)
Cec09g0479 437 MobiDBLite consensus disorder prediction 103 123 - -
Cec09g0479 437 SMART PP2C_SIG_2 143 398 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec09g0479 Cec-Chr9:4063707 Cec10g0939 Cec-Chr10:20774523 6.80E-34 dispersed
Cec02g1796 Cec-Chr2:35831446 Cec09g0479 Cec-Chr9:4063707 2.30E-70 transposed
Cec03g0117 Cec-Chr3:1162557 Cec09g0479 Cec-Chr9:4063707 7.70E-24 transposed
Cec05g1791 Cec-Chr5:29790386 Cec09g0479 Cec-Chr9:4063707 7.70E-35 transposed
Cec07g1505 Cec-Chr7:30647043 Cec09g0479 Cec-Chr9:4063707 3.40E-27 transposed
Cec09g0335 Cec-Chr9:2781364 Cec09g0479 Cec-Chr9:4063707 1.80E-30 transposed
Cec10g1656 Cec-Chr10:31038629 Cec09g0479 Cec-Chr9:4063707 4.00E-30 transposed
Cec11g0692 Cec-Chr11:7654017 Cec09g0479 Cec-Chr9:4063707 7.60E-21 transposed
Cec11g1929 Cec-Chr11:33458689 Cec09g0479 Cec-Chr9:4063707 1.50E-88 transposed
Cec06g0432 Cec-Chr6:4890063 Cec09g0479 Cec-Chr9:4063707 1.50E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0479 K14803 - csv:101216626 706.827