Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec09g0536 | ATGGCGACGAGGAATCGAACTGCACAGTTTAAAAGGCACAGGGACGCCGTGAAGAGCGTCCGTGCACCTTTATCTTCTTCGGCAGCTGGTTCGAGCGGGCCGGTTATTGAGATGGTGAGTTCGTCTCTTCTTCGTTCAAAGCGTTCTTCTTCGTATGCTCCTCTTAGCACTGAAGATCCAGGACCTTCGAGTGATGCATTTATGGTGGGTCTACCTCCAGCATGGGTGGATGATTCTGAAGAAATAACTGTTAATATACAGAAAATTCGTAGGAAAATGGCAGAATTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGCAAAGAAGATGAGCATACGATTGAGGCACTTACACTAGAGATTACCAATCTTTTGAAAACTTCCGAGAAGAGGTTGAAGAAAATTTCTAGTAATGGGTCCTCAGAGGATATTATCATCAGAAAAAATGTCCAGCGTTCTCTTGCTACAGAGCTTCAGAATCTTTCGATGGACCTTCGTAGAAGACAGTCAATGTATCTGAAACGTCTGCAGCAGCAAAAGGAGGGACACGATGGAATTGATTTGGAGATAAATTTGAATGGAAACAGAACTCTTCAGGAGGATGATGGATATGATGAATTTGGAGCCAATGAAAACCAAACGATGACATTAGATGGGCATCACATTCAGGGAAGGGAGAAAGAGATTAAACAGGTTGTGAAATCGGTAAATGAGCTCGCCCAAATTATGAAGGATCTCTCAACCCTTGTTATAGACCAGGGTACCATTGTCGATAGAATTGACCACAATATTCAGAATGTTGCTGCTTCAGTTGAAGAGGGCTTTAAACAGCTTCAGAAGGCAGAGAACAGTCAGAAGGATGGAGGAATGGTGAAATGTGCAACAGTGCTTGTTATTATGTGTTTCATAATGTTGGTTCTGTTGATACTGAAGGAGATAATTATGTAA | 960 | 41.98 | MATRNRTAQFKRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDPGPSSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGKEDEHTIEALTLEITNLLKTSEKRLKKISSNGSSEDIIIRKNVQRSLATELQNLSMDLRRRQSMYLKRLQQQKEGHDGIDLEINLNGNRTLQEDDGYDEFGANENQTMTLDGHHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGFKQLQKAENSQKDGGMVKCATVLVIMCFIMLVLLILKEIIM | 319 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4613302 | 4617136 | - | CePI673135_09g005360.1 | Cec09g0536 | 211046 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec09g0536 | 319 | Gene3D | - | 72 | 277 | - | - | |
Cec09g0536 | 319 | ProSiteProfiles | t-SNARE coiled-coil homology domain profile. | 223 | 285 | IPR000727 | - | |
Cec09g0536 | 319 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Cec09g0536 | 319 | SMART | tSNARE_6 | 215 | 285 | IPR000727 | - | |
Cec09g0536 | 319 | SMART | SynN_4 | 66 | 181 | IPR006011 | GO:0016020(InterPro) | |
Cec09g0536 | 319 | ProSitePatterns | Syntaxin / epimorphin family signature. | 229 | 268 | IPR006012 | GO:0005484(InterPro)|GO:0006886(InterPro)|GO:0016020(InterPro) | |
Cec09g0536 | 319 | Pfam | SNARE domain | 259 | 311 | IPR000727 | - | |
Cec09g0536 | 319 | CDD | SNARE_syntaxin16 | 226 | 284 | - | - | |
Cec09g0536 | 319 | FunFam | Syntaxin-43 | 72 | 277 | - | - | |
Cec09g0536 | 319 | PANTHER | SYNTAXIN | 82 | 305 | IPR045242 | GO:0000149(PANTHER)|GO:0005484(PANTHER)|GO:0006886(PANTHER)|GO:0006906(PANTHER)|GO:0012505(PANTHER)|GO:0016021(PANTHER)|GO:0031201(PANTHER)|GO:0048278(PANTHER) | |
Cec09g0536 | 319 | SUPERFAMILY | t-snare proteins | 71 | 278 | IPR010989 | GO:0016020(InterPro)|GO:0016192(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g1601 | Cec-Chr2:33562431 | Cec09g0536 | Cec-Chr9:4613302 | 1.70E-102 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec09g0536 | K08489 | - | csv:101204192 | 570.081 |