Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0539 ATGGCTACCGATTCTCATGCCCCTACTCCAAGAGGTCTTCTCTGTAATGCTGGGGCTGGTGCTGCTGCTGGAGTTCTTGCTGCTACGTTTGTTTGCCCTTTGGATGTTATCAAGACGAGATTTCAGGTTCATGGATTGCCAAACATCGGTAAAGGGAGTCTTATAGTTGGTAGTCTGCAACAAATTTTTCATAAGGAGGGGCTACGTGGAATGTATAGAGGTCTCGCACCTACTGTGCTTGCATTACTTCCTAACTGGGCTGTTTACTTCACAATATATGGGCAGCTTAAAAGCTTTCTTGGCTCTGATGGTGAAAATCGTCAGCTTTCAATAGGTGCTAATATGATGGCTGCTTCTGGTGCCGGGGCTGCTACAACTATTGCAACCAATCCTCTATGGGTAGTTAAGACCAGGCTACAGACACAGGGAATGAAATCTGGTGTGCTACCATATAGAAATACAGTGTCTGCCTTGAGGAGAATAGCCTCTGAAGAAGGCATTCGTGGATTGTACAGTGGGCTTGTGCCTGCTTTGGCTGGTGTAAGTCACGTCGCTATCCAGTTTCCAACATATGAAAAAATAAAAAGTTATTTGGCTAGAAGAGACAATACGACAACGGACAAACTCACCGCACGCGATGTTGCGGTCGCCTCCTCTGTCTCCAAGATATTTGCTTCTACATTGACCTATCCACACGAGGTTGTACGATCCAGGCTTCAGGAACAAGGGTTTCACTCTGAGAAGCGTTATTCTGGGGTAGCCGATTGCGTAAAGAAAGTATTTCAACAAGATGGTCTCCCTGGTTTCTATCGAGGGTGTGCAACCAACCTTCTCAGGACGACGCCTGCTGCTGTCATCACATTTACAAGTTTTGAAATGATTCACCGTTTTCTTGTCAACTTATTTCCTCCCGATCCACATCCGCACACAATATGA 936 45.83 MATDSHAPTPRGLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPNIGKGSLIVGSLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTIYGQLKSFLGSDGENRQLSIGANMMAASGAGAATTIATNPLWVVKTRLQTQGMKSGVLPYRNTVSALRRIASEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKSYLARRDNTTTDKLTARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGFHSEKRYSGVADCVKKVFQQDGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVNLFPPDPHPHTI 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4639565 4642918 + CePI673135_09g005390.1 Cec09g0539 211049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0539 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 99 IPR018108 -
Cec09g0539 311 Gene3D Mitochondrial carrier domain 2 103 IPR023395 -
Cec09g0539 311 Gene3D Mitochondrial carrier domain 104 301 IPR023395 -
Cec09g0539 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Cec09g0539 311 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 301 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(InterPro)|GO:0055085(PANTHER)
Cec09g0539 311 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 1 106 - -
Cec09g0539 311 FunFam NAD+ transporter 107 302 - -
Cec09g0539 311 Pfam Mitochondrial carrier protein 15 102 IPR018108 -
Cec09g0539 311 Pfam Mitochondrial carrier protein 108 200 IPR018108 -
Cec09g0539 311 Pfam Mitochondrial carrier protein 214 300 IPR018108 -
Cec09g0539 311 SUPERFAMILY Mitochondrial carrier 13 293 IPR023395 -
Cec09g0539 311 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085(InterPro)
Cec09g0539 311 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085(InterPro)
Cec09g0539 311 PRINTS Mitochondrial carrier protein signature 218 240 IPR002067 GO:0055085(InterPro)
Cec09g0539 311 PRINTS Mitochondrial carrier protein signature 124 142 IPR002067 GO:0055085(InterPro)
Cec09g0539 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085(InterPro)
Cec09g0539 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 297 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0586 Cec-Chr1:6219264 Cec09g0539 Cec-Chr9:4639565 3.80E-118 dispersed
Cec05g2641 Cec-Chr5:37117694 Cec09g0539 Cec-Chr9:4639565 2.50E-19 dispersed
Cec06g0524 Cec-Chr6:5844461 Cec09g0539 Cec-Chr9:4639565 4.40E-25 dispersed
Cec09g0539 Cec-Chr9:4639565 Cec09g0623 Cec-Chr9:5419345 8.90E-20 dispersed
Cec09g0539 Cec-Chr9:4639565 Cec04g0910 Cec-Chr4:28848057 7.00E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0539 K15115 - csv:101204681 581.637