Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0544 ATGGCTGCCAGAACAACCACCGCCACCGCCTTCTACTTTCTCATCCTCATTTCCCTTTACATTTCCACTTCCGCCGCCCCCACCGGTTCAGTATGCAGCTCGACTCGAGACCCATCCTACTGCAAATCGGTTCTCCCCAACCAAACCGGCAATGTCTACTCGTACGGACGGTCGTCGTTCAGAAAGTCACTGTCGTCGTCGCAGAAATTCCTCCGGCTAGTGGAGAAATACCTCAGGTCCCGATCGTCGCTGACAGTGCCGGCGGTGAGGGCGCTGGAGGACTGCCAGCTGCTGGCGGGACTGAACATTGATTACTTAACGACGTCGTTCCGGGCGGTGAACTCGACGAGTAGAACGTTGCCGGAGATGAAGGCGGACGACGTGCAGAGTCTGCTGAGTGCGATATTGACGAATCAACAGACTTGTTTGGATGGAATTAAGGCGACGGCGGGTTCTTGGTCGCTCAAAAATGGCCTTTCTCTCCCACTTGCTGCTGACACCAAGCTCTACTCTCTGTCCTTGGCCTTCTTTACCAAAGGTTGGGTTCCAAAGAAGAAGAAAAAACCGACATGGAAAGCCGCCGGCAGACAAGGCTGGTTCAGAAATGGGCGAATGTCACTCAAAATGTCCAGCCGAACTAAAGCGATCTACGAGACGGCGACCCGCCGGAATCTGTTGCAGACCGATGACGGCGGCGACGACCAGATTGCGGTCAGGGACATCGTCGTTGTCAGTCAAGACGGCAGCGGAAATTTCACCACCATCAATGAGGCGATTGCGGCGGCACCGAACAACTCTGCTCCGTCCGACGGGTATTTCTTGATTTTCGTGTCGGCCGGAATTTATGAAGAATATGTGTCGATTGCGAAGAACAAGAGGTACTTGATGATGATCGGAGATGGCATTAATCAGACCGTCGTCACCGGTAATCGGAGTGTCGTTGACGGCTGGACCACCTTCAATTCCGCCACGTTTGCGGTGGTCGGACCTGGATTCGTAGCAGTAAACATGACATTCAGAAACACCGCCGGCGCCATAAAGCATCAAGCCGTAGCCGTCCGGAATGGCGCCGACTTATCAACATTCTACCTCTGCAGCTTCGAAGCCTACCAAGACACCTTATACACCCATTCCCTCCGCCAATTCTACCGCGACTGCGACATCTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGTCGTCTTCCAGAACTGCAACATTTACCCACGCCTCCCGATGTCCAACCAGTTCAACGCCATCACCGCCCAGGGCCGGACCGACCCAAATCAGAACACCGGCACCTCCATCTACAACTGTCGAATCACGGCAGCCGACGATCTGGCGAACAACAGCGGAGCCGGCGTCAAGACGTTCCTAGGGCGGCCGTGGAAGGAATACTCAAGGACGGTTTATATGCAGAGCTTTATGGATGATTTGATTGATCCGGAGGGATGGAGGGCTTGGAATGGGGATTTTGCTTTGAACACTTCGTATTATGCGGAATTTGGGAATTTTGGGCCGGGATCTAACACGTCGGAGAGGGTTAATTGGCCGGGATTTCATTTGATTAATGATACCGATGCTGGCAATTTCACGGCGGGGAATTTTGTGTTGGCCGACGATTGGCTGCCGCAGACCGGCGTTCCCTATACCAGCGGCCTCACGGACTAG 1674 54.24 MAARTTTATAFYFLILISLYISTSAAPTGSVCSSTRDPSYCKSVLPNQTGNVYSYGRSSFRKSLSSSQKFLRLVEKYLRSRSSLTVPAVRALEDCQLLAGLNIDYLTTSFRAVNSTSRTLPEMKADDVQSLLSAILTNQQTCLDGIKATAGSWSLKNGLSLPLAADTKLYSLSLAFFTKGWVPKKKKKPTWKAAGRQGWFRNGRMSLKMSSRTKAIYETATRRNLLQTDDGGDDQIAVRDIVVVSQDGSGNFTTINEAIAAAPNNSAPSDGYFLIFVSAGIYEEYVSIAKNKRYLMMIGDGINQTVVTGNRSVVDGWTTFNSATFAVVGPGFVAVNMTFRNTAGAIKHQAVAVRNGADLSTFYLCSFEAYQDTLYTHSLRQFYRDCDIYGTVDFIFGNAAVVFQNCNIYPRLPMSNQFNAITAQGRTDPNQNTGTSIYNCRITAADDLANNSGAGVKTFLGRPWKEYSRTVYMQSFMDDLIDPEGWRAWNGDFALNTSYYAEFGNFGPGSNTSERVNWPGFHLINDTDAGNFTAGNFVLADDWLPQTGVPYTSGLTD 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4669231 4672982 - CePI673135_09g005440.1 Cec09g0544 211054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0544 557 Pfam Plant invertase/pectin methylesterase inhibitor 30 175 IPR006501 GO:0004857(InterPro)
Cec09g0544 557 ProSitePatterns Pectinesterase signature 2. 388 397 IPR033131 -
Cec09g0544 557 Pfam Pectinesterase 242 539 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec09g0544 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 179 IPR035513 -
Cec09g0544 557 FunFam Pectinesterase 29 179 - -
Cec09g0544 557 SMART PMEI_2 22 176 IPR006501 GO:0004857(InterPro)
Cec09g0544 557 PANTHER PECTINESTERASE 10 546 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cec09g0544 557 CDD PMEI-like_3 30 178 - -
Cec09g0544 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 179 IPR035513 -
Cec09g0544 557 SUPERFAMILY Pectin lyase-like 237 554 IPR011050 -
Cec09g0544 557 Gene3D - 236 555 IPR012334 -
Cec09g0544 557 FunFam Pectinesterase 235 555 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec05g2426 Cec-Chr5:35492389 Cec09g0544 Cec-Chr9:4669231 5.20E-151 dispersed
Cec09g0544 Cec-Chr9:4669231 Cec10g0006 Cec-Chr10:119820 1.90E-105 dispersed
Cec09g0544 Cec-Chr9:4669231 Cec09g0545 Cec-Chr9:4700357 1.10E-108 tandem
Cec02g0121 Cec-Chr2:1297745 Cec09g0544 Cec-Chr9:4669231 4.60E-160 transposed
Cec11g1504 Cec-Chr11:29244139 Cec09g0544 Cec-Chr9:4669231 1.50E-171 transposed
Cec06g0498 Cec-Chr6:5588404 Cec09g0544 Cec-Chr9:4669231 2.30E-90 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0544 K01051 - csv:101205321 1004.2