Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0545 ATGTTTGGCCTCAAAAACAGAGCTCAAATCCCTTCAAATCCCACCTCCATTTCCACCATTTCCACATTCTTCTTCATTTTCTTCCTCTTCTCCTTCAAACCCATTTCTTCAAATCCCCAAATCCACCAAACCGCTCGATCCCTTTGCAATGGCACTCTGTTTCCAAACCTCTGTTTCTCAAAGCTCTCTTCTTTTCCCCATTTGGCTACCCTCTCGCCGCAAAAGCTCGCCAGCAGCGCCCTCAACTTCACTGCCCGCGAGGTCCTCGGTGCCTACGCCAATTGCACCAGGCTCAAGACTCACCTTTACTGTGGCCTGAATCCCACCGACCGTCGGGCCCTCGACGACTGTCTTGAGCTTCTCGACGGCAGCATTGCCGAGCTCAAAGCTTCGATTTGCGATCTAGCGCCGCCGCAGTCCGCTGCCCGTCACTCCCATGATCTGTTGACATTGGTCAGCGCCGCCATGACTAACCACCGGACTTGTGTTGATGGGTTTTATAATAGTTCTGGGATTGTGAGGAGACGGGTGGAGCAGTATTTGGGGAAAATTGGACAGCATTTAAGTATTGATTTGGCGATGTTGAAGAAAATCCCTGGAGTTAATAGGGGTGCGGCGGCAGGGGAGGTGTTGCCGGAGTATGGGGCGGTGAAAGGTGGGTTTCCGAAGTGGGTTTCGGTTAAGGATCGGAGATTGTTGCAGGCGGCGGTGAATGAGACGAATTTTAATTTGGTGGTGGCGAAGGATGGCTCTGGGAATTTCACCACTGTCGGTGAGGCCGTCGCCGCCGCTCCGAATTCGAGCACCACCAGGTTTGTAATATACATAAAAGCAGGGGCGTATTTTGAGAACGTGGAAATAGAAAGGGCAAAGGCAAACTTGATGTTTATCGGCGACGGTATCGGAAAGACGCTGATAAAAGGTGACCGAAACGTCGTAGACGGCTGGACTACTTTCCGATCAGCCACCGTGGCGGTGGTTGGCACCGGGTTCATAGCAAAAGGCATAACATTTGAAAACTACGCGGGTCCAAGCAAGCACCAAGCCGTAGCCTTACGAAGCAATTCCGACTTCTCTGCATTTTACCAATGCAGCTTCGTTGGCTATCAAGACACTCTCTACGCTCACTCCCTCCGTCAATTCTACCGCGAATGCGATATCTACGGTACCATCGACTTTATCTTTGGTAATGCTGCCGTCGTTTTCCAAAATTGCAACCTCTATGCTCGAAAACCCAACCCTAACCAACGCAACATATTCACTGCCCAAGGTCGTGAGGACCCTAACCAAAACACAGGAATCTCAATCCTCAATTGTAAGGTTGAAGCCGCTGCTGATCTAATCCCTGTTCTTTCCTCGTTCAAAACTTACTTGGGCCGACCCTGGAAGTTGTACTCGAGGACGGTTTTTCTCCGGTCGTTTATTGGCCAGTTGGTTGAACCGGCCGGGTGGCTTGAGTGGAACGGGACGTTTGCGTTGGATACTTTGTATTATAGGGAGTATTTGAACCGTGGGCCCGGTTCAAATGTGACTGGACGAGTTACTTGGTCGGGATATCGGATCATTGCTAACGCAACGGAAGCGAGTCAGTTTACCGTTGAGGGGTTTATACAGGGTAGCTCGTGGTTGAACTCGACCGGGATTCCTTTCTTCTCCGGTTTGGCTTGA 1668 50.78 MFGLKNRAQIPSNPTSISTISTFFFIFFLFSFKPISSNPQIHQTARSLCNGTLFPNLCFSKLSSFPHLATLSPQKLASSALNFTAREVLGAYANCTRLKTHLYCGLNPTDRRALDDCLELLDGSIAELKASICDLAPPQSAARHSHDLLTLVSAAMTNHRTCVDGFYNSSGIVRRRVEQYLGKIGQHLSIDLAMLKKIPGVNRGAAAGEVLPEYGAVKGGFPKWVSVKDRRLLQAAVNETNFNLVVAKDGSGNFTTVGEAVAAAPNSSTTRFVIYIKAGAYFENVEIERAKANLMFIGDGIGKTLIKGDRNVVDGWTTFRSATVAVVGTGFIAKGITFENYAGPSKHQAVALRSNSDFSAFYQCSFVGYQDTLYAHSLRQFYRECDIYGTIDFIFGNAAVVFQNCNLYARKPNPNQRNIFTAQGREDPNQNTGISILNCKVEAAADLIPVLSSFKTYLGRPWKLYSRTVFLRSFIGQLVEPAGWLEWNGTFALDTLYYREYLNRGPGSNVTGRVTWSGYRIIANATEASQFTVEGFIQGSSWLNSTGIPFFSGLA 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4700357 4706648 + CePI673135_09g005450.1 Cec09g0545 211055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0545 555 Pfam Plant invertase/pectin methylesterase inhibitor 46 194 IPR006501 GO:0004857(InterPro)
Cec09g0545 555 CDD PMEI-like_3 47 200 - -
Cec09g0545 555 Gene3D - 237 554 IPR012334 -
Cec09g0545 555 Pfam Pectinesterase 243 539 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cec09g0545 555 SUPERFAMILY Pectin lyase-like 241 553 IPR011050 -
Cec09g0545 555 FunFam Pectinesterase 237 554 - -
Cec09g0545 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 199 IPR035513 -
Cec09g0545 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 200 IPR035513 -
Cec09g0545 555 ProSitePatterns Pectinesterase signature 2. 387 396 IPR033131 -
Cec09g0545 555 SMART PMEI_2 40 194 IPR006501 GO:0004857(InterPro)
Cec09g0545 555 PANTHER PECTINESTERASE 21 545 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cec09g0545 555 NCBIfam pectinesterase inhibitor domain 20 197 IPR006501 GO:0004857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0041 Cec-Chr1:335094 Cec09g0545 Cec-Chr9:4700357 5.00E-136 dispersed
Cec04g1923 Cec-Chr4:37622944 Cec09g0545 Cec-Chr9:4700357 5.10E-119 dispersed
Cec05g1064 Cec-Chr5:9392488 Cec09g0545 Cec-Chr9:4700357 6.30E-131 dispersed
Cec07g1548 Cec-Chr7:31022653 Cec09g0545 Cec-Chr9:4700357 1.00E-127 dispersed
Cec09g0545 Cec-Chr9:4700357 Cec10g0006 Cec-Chr10:119820 1.80E-127 dispersed
Cec09g0544 Cec-Chr9:4669231 Cec09g0545 Cec-Chr9:4700357 1.10E-108 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0545 K01051 - csv:101205557 985.326