Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec09g0586 ATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACTGCCACAGCCAGAGTTCTCGCTTGTCTTTATGAGAAAGATCTCGATTACGAGGTTGTTCTTCTGGATATGAAAAATAACGAGCACAAGAAACACCCCTTTCTCTCCATTAACCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACCATTTTCGAATCAAGGGCCATTACTCAATACTTGGCCAACGCCTACGCCAGCAAGGGAACCCAATTGATCTCCAACGACCCGAAGAAAGCGGCGATCATATCAACGTGGATTGAAGTGGAGGGCCACCATTACGACCCACCGGCGGTTGCTCTGTCGTTTGAGCATCTAGTCAAGCCGCTGTTTGGACTCGGTGAAACTGATCCCGCAGCGGTAGCGGAGAACGAAGCCAAGCTGGGGAAAGCTCTTGACATCTACGAGAATCAACTTAGCAGAAACAAGTTCTTGGCTGGGGATGAGTTCAGTTTGGCGGATCTGCATCACATACCCAATGTGAGCTACTTGTTCATGACGCCGTCGAAGAAGCTGTTCGAGTCACGGCCACGTGTCAACGCTTGGGTGGCCGAGATCACTGCAAGGCCTTCGTGGGCTAAGGTTGTTGCATTGCGCAACCAGAGTTTAAGAGATTTCGTACCAACATGA 672 50.3 MASIKVHGSPISTATARVLACLYEKDLDYEVVLLDMKNNEHKKHPFLSINPFGQVPGFQDGDLTIFESRAITQYLANAYASKGTQLISNDPKKAAIISTWIEVEGHHYDPPAVALSFEHLVKPLFGLGETDPAAVAENEAKLGKALDIYENQLSRNKFLAGDEFSLADLHHIPNVSYLFMTPSKKLFESRPRVNAWVAEITARPSWAKVVALRNQSLRDFVPT 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5060828 5062346 - CePI673135_09g005860.1 Cec09g0586 211096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec09g0586 223 SUPERFAMILY GST C-terminal domain-like 74 215 IPR036282 -
Cec09g0586 223 SFLD Main.5: Phi-like 1 212 - -
Cec09g0586 223 CDD GST_C_Phi 92 210 IPR034347 -
Cec09g0586 223 Gene3D - 90 214 - -
Cec09g0586 223 SUPERFAMILY Thioredoxin-like 1 82 IPR036249 -
Cec09g0586 223 FunFam Glutathione S-transferase F2 88 210 - -
Cec09g0586 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 220 IPR010987 -
Cec09g0586 223 Pfam Glutathione S-transferase, C-terminal domain 129 204 IPR004046 -
Cec09g0586 223 CDD GST_N_Phi 4 76 - -
Cec09g0586 223 SFLD Glutathione Transferase (cytosolic) 1 212 IPR040079 -
Cec09g0586 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Cec09g0586 223 FunFam Glutathione S-transferase F2 3 87 - -
Cec09g0586 223 Gene3D Glutaredoxin 2 87 - -
Cec09g0586 223 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Cec09g0586 223 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 215 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec08g1446 Cec-Chr8:26226494 Cec09g0586 Cec-Chr9:5060828 1.10E-48 dispersed
Cec09g0584 Cec-Chr9:5046434 Cec09g0586 Cec-Chr9:5060828 1.80E-80 dispersed
Cec09g0585 Cec-Chr9:5058917 Cec09g0586 Cec-Chr9:5060828 7.80E-76 tandem
Cec09g0586 Cec-Chr9:5060828 Cec09g0587 Cec-Chr9:5064425 2.00E-50 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec09g0586 K00799 - csv:101212771 408.683